New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi 15391 =NA (NA)79 (0.820) 61/240 0.8 78.8% intergenic (+93/‑54) dnaJ/insL1 chaperone Hsp40, DnaK co‑chaperone/IS186 transposase
?NC_000913_3_bme_pgi = 458799 22 (0.220)intergenic (+99/‑89) clpX/lon ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La

Only 100 of 183 total aligned reads displayed.

CCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCTGCGCGATGTGGTGG  >  NC_000913_3_bme_pgi/458650‑458948
                                                                                                                                                     |                                                                                                                                                     
         aTTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgct                                                                                                                                              >  2:1106340‑M2/1‑141 (MQ=255)
           tggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGAc                                                                                                                                            <  1:1218394‑M1/24‑1 (MQ=255)
            tATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaac                                                                                                                                           >  3:362475‑M2/1‑138 (MQ=255)
                 ttcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACAt                                                                                                                                      >  3:197267‑M1/121‑150 (MQ=255)
                 ttcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACAt                                                                                                                                      <  4:197267‑M1/30‑1 (MQ=255)
                 cAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaag                                                                                                                                      <  1:907886‑M2/150‑18 (MQ=255)
                 cAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaag                                                                                                                                      >  1:282820‑M2/1‑133 (MQ=255)
                  aaGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATg                                                                                                                                     >  4:245377/1‑150 (MQ=255)
                   cgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGt                                                                                                                                    >  2:478715‑M1/119‑150 (MQ=255)
                     tgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTa                                                                                                                                  >  3:71024‑M1/117‑150 (MQ=255)
                              atccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGc                                                                                                                         >  3:756889‑M1/108‑150 (MQ=255)
                                 cctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTg                                                                                                                      <  2:1192612‑M1/46‑1 (MQ=255)
                                  ctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCACCATATACTAAAGTACATCTTAATAGATGGCGTGa                                                                                                                     <  1:56139‑M1/47‑1 (MQ=255)
                                      aTCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgtggtattacgcctgat                                                                                                                 <  1:942712‑M2/150‑39 (MQ=255)
                                        gcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCg                                                                                                                        >  4:227607‑M1/98‑141 (MQ=255)
                                        gcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCg                                                                                                                        <  3:227607‑M1/44‑1 (MQ=255)
                                             gAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaactt                                                                                                                                         <  1:1149955‑M2/119‑15 (MQ=255)
                                             gAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaactt                                                                                                                                         >  2:1149955‑M2/1‑105 (MQ=255)
                                               ataatTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaa                                                                                                        >  3:85908‑M2/1‑103 (MQ=255)
                                               aaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCgtgt                                                                                                        <  3:9409‑M1/60‑1 (MQ=255)
                                                  atTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgt                                                                                                     >  2:509029‑M2/1‑100 (MQ=255)
                                                  atTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgt                                                                                                                                >  3:407277‑M2/1‑100 (MQ=255)
                                                           tCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgat                                                                                               <  4:425714‑M2/147‑57 (MQ=255)
                                                               cgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGCCGTACATGTTAAGAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGc                                                                                        >  1:1171659‑M1/75‑150 (MQ=255)
                                                                tACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCg                                                                                       >  2:1070919/1‑150 (MQ=255)
                                                                gcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCg                                                                                       <  2:235017‑M1/77‑1 (MQ=255)
                                                                   aaTTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctc                                                                                    <  3:210856‑M2/150‑68 (MQ=255)
                                                                     ttAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcac                                                                                  <  3:748164‑M2/150‑70 (MQ=255)
                                                                        tcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGa                                                                                     <  4:606622‑M1/79‑1 (MQ=255)
                                                                        tcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGa                                                                                     >  3:606622‑M1/66‑144 (MQ=255)
                                                                           tcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGt                                                                                                                                          <  3:542312‑M1/26‑1 (MQ=255)
                                                                           aaCCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatatga                                                                                                             <  2:71485‑M2/117‑43 (MQ=255)
                                                                             ttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTaa                                                                          >  2:907360‑M1/61‑150 (MQ=255)
                                                                               aacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATcccc                                                                                                                                                      >  3:495263‑M1/59‑72 (MQ=255)
                                                                               aacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAactagga                                                                        <  4:659525‑M1/92‑4 (MQ=255)
                                                                               aacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAaga                                                                        <  4:691421‑M1/92‑1 (MQ=255)
                                                                               aaaaaGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggt                                                                        >  2:558699‑M2/1‑71 (MQ=255)
                                                                                acgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAagag                                                                       <  3:360395‑M1/93‑1 (MQ=255)
                                                                                  gaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGGCGTGTCATCTGATTAGCTGGCGGAAATTAAACTCcgagag                                                                     <  1:383614‑M1/95‑1 (MQ=255)
                                                                                    ggggggATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAAGGTGGGGGATACATCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactgttcagca                                                                   <  4:423629‑M2/150‑85 (MQ=255)
                                                                                      ggggATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGaa                                                                                    <  1:1019626/131‑1 (MQ=255)
                                                                                       accgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTaa                                                                                                                                 >  1:715471‑M1/51‑85 (MQ=255)
                                                                                        ccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAag                                                                         >  1:619333‑M1/50‑140 (MQ=255)
                                                                                        ccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAag                                                                         <  2:619567‑M1/91‑1 (MQ=255)
                                                                                        ccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGctct                                                               >  3:163615‑M1/50‑150 (MQ=255)
                                                                                        ccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGctct                                                               >  2:1226557‑M1/50‑150 (MQ=255)
                                                                                           ttttATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctgg                                                            >  2:942712‑M2/1‑59 (MQ=255)
                                                                                              tATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggccc                                                         >  2:686638‑M2/1‑56 (MQ=255)
                                                                                               gtcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATc                                                        >  1:107515‑M1/43‑150 (MQ=255)
                                                                                                tcgcattcttcagatggttcaacccttaagttagcgcttatGGGGCAACATCCCCATATACTTACGTACAGGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATcc                                                       <  4:154429‑M1/109‑1 (MQ=255)
                                                                                                tcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCt                                                                                           >  4:323011‑M1/42‑114 (MQ=255)
                                                                                                tcgcattcttcagatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCt                                                                                           <  3:323011‑M1/73‑1 (MQ=255)
                                                                                                   ccccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGa                                                    <  3:245377/150‑1 (MQ=255)
                                                                                                    cccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattg                                                   >  4:67815‑M2/1‑50 (MQ=255)
                                                                                                    cccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattg                                                   <  1:793327‑M2/150‑101 (MQ=255)
                                                                                                    cccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTa                                                                           <  4:512322/126‑1 (MQ=255)
                                                                                                    cccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTa                                                                           >  3:512322/1‑126 (MQ=255)
                                                                                                       tttAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccga                                                                                                >  2:50123‑M2/1‑47 (MQ=255)
                                                                                                       tttAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccga                                                                                                <  1:50123‑M2/102‑56 (MQ=255)
                                                                                                       tttAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgtg                                                                                                                               <  4:559055‑M2/71‑25 (MQ=255)
                                                                                                       tttAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgtg                                                                                                                               >  3:559055‑M2/1‑47 (MQ=255)
                                                                                                            gatggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGAACAGTc                                                                                                            >  1:1190535‑M1/30‑85 (MQ=255)
                                                                                                             atggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGaa                                          <  2:615548‑M1/122‑1 (MQ=255)
                                                                                                              tggttcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAAc                                         <  4:392480‑M1/123‑1 (MQ=255)
                                                                                                               ttCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaatt                                                                <  3:440478‑M2/126‑88 (MQ=255)
                                                                                                                  tcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCAt                                     >  1:992595‑M1/24‑150 (MQ=255)
                                                                                                                  tcaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCAt                                     >  4:9409‑M1/24‑150 (MQ=255)
                                                                                                                    ctATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaact                                   >  4:748164‑M2/1‑34 (MQ=255)
                                                                                                                         ctcGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGACGCCCAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGCACGCATTGAAATc                              >  2:458541/1‑150 (MQ=255)
                                                                                                                          tcGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagccc                                           <  2:801812‑M2/136‑109 (MQ=255)
                                                                                                                          taagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATcc                             >  1:711675‑M1/16‑150 (MQ=255)
                                                                                                                            agttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATcccc                           >  3:392480‑M1/14‑150 (MQ=255)
                                                                                                                             gttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCg                          >  4:715328‑M1/13‑150 (MQ=255)
                                                                                                                              ttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGt                         >  3:681235‑M1/12‑150 (MQ=255)
                                                                                                                                  gAATGTGGGGGAAACATCCCataagcgctaacttaagggttg                                                                                                                                 <  4:107066‑M2/42‑23 (MQ=255)
                                                                                                                                  gAATGTGGGGGAAACATCCCataagcgctaacttaagggttg                                                                                                                                 >  3:107066‑M2/1‑20 (MQ=255)
                                                                                                                                         ggggAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgc              <  1:150238‑M2/150‑138 (MQ=255)
                                                                                                                                         ggggAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgc              <  4:270561‑M2/150‑138 (MQ=255)
                                                                                                                                         ggggAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctgg                                                            >  1:282224‑M2/1‑13 (MQ=255)
                                                                                                                                         ggggAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctgg                                                            <  2:282224‑M2/104‑92 (MQ=255)
                                                                                                                                           taccacaacCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtc                                                                       >  1:703572‑M2/5‑11 (MQ=255)
                                                                                                                                           taccacaacCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtc                                                                       <  2:703572‑M2/87‑81 (MQ=255)
                                                                                                                                           ggAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgccg            >  4:210856‑M2/1‑11 (MQ=255)
                                                                                                                                           ggAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctca                                                                                   >  3:257954‑M2/1‑11 (MQ=255)
                                                                                                                                            gAAACATCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgccgg           >  1:623000‑M2/1‑10 (MQ=255)
                                                                                                                                             atgtttCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCTGCGCGa          >  1:190099/6‑150 (MQ=255)
                                                                                                                                               gtttCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCTGCGCGAtg        >  2:87376/4‑150 (MQ=255)
                                                                                                                                               aCATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGcaca                                                                                                               <  2:1062396/47‑1 (MQ=255)
                                                                                                                                               aCATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGcaca                                                                                                               >  1:1062396/1‑47 (MQ=255)
                                                                                                                                               aCATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCTGCGCGAtg        >  1:516553/1‑150 (MQ=255)
                                                                                                                                               aCATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCTGCGCGAtg        >  2:418499/1‑150 (MQ=255)
                                                                                                                                                  tCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgccggggctct     <  2:524273‑M2/150‑147 (MQ=255)
                                                                                                                                                  tCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaact                                   <  4:440918‑M2/120‑117 (MQ=255)
                                                                                                                                                  tCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgat                                                                               <  1:1035616‑M2/76‑73 (MQ=255)
                                                                                                                                                  tCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgat                                                                               >  2:1035616‑M2/1‑4 (MQ=255)
                                                                                                                                                   tccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgat                                                                                               >  1:726096‑M2/2‑3 (MQ=255)
                                                                                                                                                   cccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgat                                                                                               <  2:726096‑M2/59‑57 (MQ=255)
                                                                                                                                                     cataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgccggggctctaac  >  1:474130‑M2/1‑1 (MQ=255)
                                                                                                                                                     cataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgccggggct       >  2:1231414‑M2/1‑1 (MQ=255)
                                                                                                                                                     cataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgccggggct       <  1:1231414‑M2/145‑145 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCTGCGCGATGTGGTGG  >  NC_000913_3_bme_pgi/458650‑458948

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.