New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi 1097253 =NA (NA)24 (0.170) 19/260 13.9 46.7% intergenic (+424/+312) ycdU/serX putative inner membrane protein/tRNA‑Ser
?NC_000913_3_bme_pgi 1097266 = 28 (0.190)intergenic (+437/+299) ycdU/serX putative inner membrane protein/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.

TCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGcgg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_bme_pgi/1097400‑1097253
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCG  >  NC_000913_3_bme_pgi/1097266‑1097417
                                                                                                                                                                                                                                                                                                            
TCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACATACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCTACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCG                                                                                                                                                        <  1:1626642/150‑1
TCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCG                                                                                                                                                        <  4:338671/150‑1
TCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCG                                                                                                                                                        >  2:71326/1‑150
 CCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGGCAGACCGCGCACGCAGTTAGCGG                                                                                                                                                       >  4:443298/1‑150
 CCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGG                                                                                                                                                       >  4:927709/1‑150
 CCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGG                                                                                                                                                       <  1:656283/150‑1
 CCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGG                                                                                                                                                       <  1:775721/150‑1
            CGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGG                                                                                                                                                       >  1:129864/1‑139
            CGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGGTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGG                                                                                                                                                       <  2:129864/139‑1
                                                                                           CCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGC                                                                                                                                                         <  4:1035906/58‑1
                                                                                           CCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGC                                                                                                                                                         >  3:1035906/1‑58
                                                                                                CGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGC                                                                                                                                                         <  3:930751/53‑1
                                                                                                CGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGC                                                                                                                                                         >  4:930751/1‑53
                                                                                                                     AGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCC                                                                 >  4:189465/1‑120
                                                                                                                     AGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCC                                                                 <  3:189465/120‑1
                                                                                                                        CAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC                                >  3:443298/1‑150
                                                                                                                         AGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAACAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCG                               >  3:232652/1‑150
                                                                                                                           TTGGACAGACCGTGAACGCAGTGAGCGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAA                                                                                   <  1:893679/96‑1
                                                                                                                           TTGGACAGACCGTGAACGCAGTGAGCGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAA                                                                                   >  2:893679/1‑96
                                                                                                                            TGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTG                            >  2:1600094/1‑150
                                                                                                                             GGACAGACCGTGAACGCAGTGAGCGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT                             >  2:398316/1‑148
                                                                                                                             GGACAGACCGTGAACGCAGTGAGCGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT                             <  1:398316/148‑1
                                                                                                                             GGACAGACCGTGAACGCAGTGAGCGGGCTGCCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGA                           >  1:1148460/1‑150
                                                                                                                              GACAGACCGTGAACGCAGTGAGCGGTCTGTCCAACTGGCTGTCGCCAGTTGTC                                                                                                                           >  2:284805/1‑53
                                                                                                                              GACAGACCGTGAACGCAGTGAGCGGTCTGTCCAACTGGCTGTCGCCAGTTGTC                                                                                                                           <  1:284805/53‑1
                                                                                                                              GACAGACCGTGAACGCAGTGAGCGGGCTGCCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTC                                                                                                        >  2:557580/1‑72
                                                                                                                              GACAGACCGTGAACGCAGTGAGCGGGCTGCCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTC                                                                                                        <  1:557580/72‑1
                                                                                                                                 AGACCGTGAACGCAGTGAGCGGTCTGTCCAACTGGCTGTCGCCAGTTGTC                                                                                                                           >  4:530837/1‑50
                                                                                                                                 AGACCGTGAACGCAGTGAGCGGTCTGTCCAACTGGCTGTCGCCAGTTGTC                                                                                                                           <  3:530837/50‑1
                                                                                                                                 AGACCGTGAACGCAGTGAGCGGGCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAA                                      >  2:1341852/1‑135
                                                                                                                                 AGACCGTGAACGCAGTGAGCGGGCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAA                                      <  1:1341852/135‑1
                                                                                                                                 AGACCGTGAACGCAGTGAGCGGGCTGCCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTAC                                                             <  4:620088/112‑1
                                                                                                                                 AGACCGTGAACGCAGTGAGCGGGCTGCCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCAGCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTAC                                                             >  3:620088/1‑112
                                                                                                                                  GACCGTGCACGCAGTGAGCGGGCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGT                                                                                           <  4:956911/81‑1
                                                                                                                                  GACCGTGAACGCAGTGAGCGGGCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGT                                                                                           >  3:956911/1‑81
                                                                                                                                    CCGTGAACGCAGTGAGCGGTCTGTCCAACTGTCTGTCGCCAGTTGTCGAACCCCGGTCGGGG                                                                                                            >  4:151806/1‑62
                                                                                                                                    CCGTGAACGCAGTGAGCGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGG                                                                                                            <  3:151806/62‑1
                                                                                                                                                      GTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCG  >  3:373136/1‑150
                                                                                                                                                      GTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTA                                                              >  2:1233338/1‑90
                                                                                                                                                      GTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTA                                                              <  1:1233338/90‑1
                                                                                                                                                      GTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATA                                                                                 >  3:742287/1‑71
                                                                                                                                                      GTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATA                                                                                 <  4:742287/71‑1
                                                                                                                                                                                                                                                                                                            
TCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGcgg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_bme_pgi/1097400‑1097253
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCG  >  NC_000913_3_bme_pgi/1097266‑1097417

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.