New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi 3652037 =NA (NA)164 (1.080) 100/258 0.4 95.4% intergenic (+6/+145) yhiS/insH1 pseudogene/IS5 transposase and trans‑activator
?NC_000913_3_bme_pgi = 3992709 8 (0.050)coding (1557/2547 nt) cyaA adenylate cyclase

Only 100 of 329 total aligned reads displayed.

CGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCA  >  NC_000913_3_bme_pgi/3992561‑3992858
                                                                                                                                                    |                                                                                                                                                     
    gaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCa                                                                                                                                                  <  3:291273‑M2/11‑1 (MQ=255)
    gaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCa                                                                                                                                                  <  3:523979‑M2/11‑1 (MQ=255)
     aaaatctcttttcttgtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctacagatgacaaacatnatctcatatcaggganttgttcgcaccttcCCTAAGTTGCAg                                                                                                                                                 <  1:1049005‑M2/12‑1 (MQ=255)
     aaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctagggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAg                                                                                                                                                 >  2:1326383‑M2/139‑150 (MQ=255)
        atctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGgag                                                                                                                                              >  2:459485‑M2/136‑150 (MQ=255)
         ttGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcga                                                                                                                                             <  1:72065‑M2/150‑11 (MQ=255)
         ttGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcga                                                                                                                                             >  3:985719‑M2/1‑140 (MQ=255)
                  tggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCg                                                                                                                                    <  3:925308‑M2/25‑1 (MQ=255)
                    gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGAc                                                                                                                                  >  1:816786‑M2/124‑150 (MQ=255)
                      cagccatcagccGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaa                                                                                                                                >  1:235639‑M2/1‑127 (MQ=255)
                      cagccatcagccGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaa                                                                                                                                <  3:865835‑M2/150‑24 (MQ=255)
                         ccatcagccGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattc                                                                                                                             >  3:1010868‑M2/1‑124 (MQ=255)
                         ccatcagccGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGATTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattc                                                                                                                             >  3:1021298‑M2/1‑124 (MQ=255)
                            tcagccGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttc                                                                                                                          <  4:41994‑M2/150‑30 (MQ=255)
                             cgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCAc                                                                                                                         >  1:1449300‑M2/115‑150 (MQ=255)
                                ccGCTGGAATATAACCGTTCCCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcgg                                                                                                                      >  4:236562‑M2/1‑117 (MQ=255)
                                 tactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTc                                                                                                                                        >  1:865791‑M2/111‑131 (MQ=255)
                                       tgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAg                                                                                                                                                 <  1:1550156‑M2/12‑1 (MQ=255)
                                          ataACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagt                                                                                                            >  2:1455542‑M2/1‑107 (MQ=255)
                                           ttcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTgcg                                                                                                           >  4:214011‑M2/101‑150 (MQ=255)
                                           taACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTCCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtc                                                                                                           <  1:411200‑M2/150‑45 (MQ=255)
                                             cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCt                                                                                                         <  1:576888‑M2/52‑1 (MQ=255)
                                             aCCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcat                                                                                                         <  4:596279‑M2/150‑47 (MQ=255)
                                             aCCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcat                                                                                                         <  1:1239792‑M2/150‑47 (MQ=255)
                                              ccGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCCCGCACAAGTTTGTATATTACAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatt                                                                                                        >  3:216642‑M2/1‑103 (MQ=255)
                                               ctgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTa                                                                                                       <  2:1619490‑M2/54‑1 (MQ=255)
                                               cGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcattt                                                                                                       <  2:1241023‑M2/150‑49 (MQ=255)
                                                  tcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctgatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCt                                                                                                    <  2:154191‑M2/57‑1 (MQ=255)
                                                  tACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactca                                                                                                              >  2:106739‑M2/1‑99 (MQ=255)
                                                  tACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactca                                                                                                              <  1:106739‑M2/140‑42 (MQ=255)
                                                     gcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGca                                                                                                 >  2:1006241‑M2/91‑150 (MQ=255)
                                                     gcgaaggtaagttgatgactcatgatgaacccggttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGca                                                                                                 >  4:806045‑M2/91‑150 (MQ=255)
                                                      cgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcac                                                                                                <  3:414146‑M2/61‑1 (MQ=255)
                                                       gAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcg                                                                                                                                      >  1:108790‑M2/1‑94 (MQ=255)
                                                        aaTAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctga                                                                                                                  <  1:958910‑M2/130‑38 (MQ=255)
                                                           gtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcaccgaca                                                                                           >  4:712451‑M2/85‑150 (MQ=255)
                                                            aaCTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt                                                                                          <  2:922481‑M2/150‑62 (MQ=255)
                                                             aCTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtt                                                                                         >  3:1033629‑M2/1‑88 (MQ=255)
                                                             aCTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt                                                                                               <  2:548528‑M2/144‑57 (MQ=255)
                                                              agttgatgactcatgatgaaccctgttctatggctccagatcacaaccatgatctcatatcagggacttgttcgcaccttcCCTAGGTTGCAGGTGATGGTCGTCGACGTGGCGCACCGCTTCCTGCTGCTCTTACCTGcaccgtcaccg                                                                                        <  2:64301‑M2/69‑1 (MQ=255)
                                                               tggtggCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatg                                                                                           <  3:128873‑M2/146‑61 (MQ=255)
                                                               tggtggCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatg                                                                                           >  4:128873‑M2/1‑86 (MQ=255)
                                                                ttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGaa                                                                                      <  1:314826‑M2/71‑1 (MQ=255)
                                                                  tggCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagc                                                                                    >  2:668285‑M2/1‑83 (MQ=255)
                                                                    gCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccg                                                                                  <  2:610124‑M2/150‑70 (MQ=255)
                                                                        tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcaccgacac                                                                                          <  4:170724‑M2/67‑1 (MQ=255)
                                                                          atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcacc                                                                                               <  1:51468‑M2/62‑1 (MQ=255)
                                                                          atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTAc                                                                            >  1:1402152‑M2/70‑150 (MQ=255)
                                                                            aTGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttc                                                                          <  1:1003977‑M2/150‑78 (MQ=255)
                                                                             tGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct                                                                         >  1:1336768‑M2/1‑72 (MQ=255)
                                                                             atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGc                                                                         >  3:794892‑M2/67‑150 (MQ=255)
                                                                                  tAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag                                                                                     >  1:1360719‑M2/1‑67 (MQ=255)
                                                                                  tAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag                                                                                     <  2:1360719‑M2/133‑67 (MQ=255)
                                                                                   cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCgtgt                                                                   <  4:1043250‑M2/90‑1 (MQ=255)
                                                                                    aCGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttctcccgattttttctcccgtaa                                                                  <  3:567341‑M2/150‑86 (MQ=255)
                                                                                         ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATc                                                             >  3:55655‑M2/55‑150 (MQ=255)
                                                                                          tgctgACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct                                                            <  2:1218846‑M2/150‑92 (MQ=255)
                                                                                             ggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGcc                                                         >  2:72033‑M2/51‑150 (MQ=255)
                                                                                                tccagatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATc                                                      >  1:189059‑M2/48‑150 (MQ=255)
                                                                                                 cTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCTATTGTCCTGAGgaatgttctaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatca                                                     >  1:1602029‑M2/1‑52 (MQ=255)
                                                                                                 cTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatca                                                     >  3:356080‑M2/1‑52 (MQ=255)
                                                                                                 cTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatca                                                     >  2:1159333‑M2/1‑52 (MQ=255)
                                                                                                   agatgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTgg                                                   <  2:9668‑M2/106‑1 (MQ=255)
                                                                                                      tgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTAc                                                                            >  1:1494993‑M2/42‑122 (MQ=255)
                                                                                                      tgacaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTAc                                                                            <  2:1494993‑M2/81‑1 (MQ=255)
                                                                                                        acaaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGAtt                                              >  4:263378‑M2/40‑150 (MQ=255)
                                                                                                         caaacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTa                                             >  4:902075‑M2/39‑150 (MQ=255)
                                                                                                           aacatgatctcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATc                                           <  4:563681‑M2/114‑1 (MQ=255)
                                                                                                           aacatgatctcatatcagggacttgtgcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATc                                           <  4:526264‑M2/114‑1 (MQ=255)
                                                                                                             tttGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                        <  4:641671‑M2/103‑64 (MQ=255)
                                                                                                             tttGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                        >  3:641671‑M2/1‑40 (MQ=255)
                                                                                                                    tcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAg                                                                                     >  3:275608‑M2/28‑99 (MQ=255)
                                                                                                                    tcatatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTg                                  >  4:1005414‑M2/28‑150 (MQ=255)
                                                                                                                     catatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcaccgacaccga                                                                                       <  2:832985‑M2/70‑1 (MQ=255)
                                                                                                                       tatcagggacttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGaa                               <  1:382042‑M2/126‑1 (MQ=255)
                                                                                                                        aaGGTAACGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgc                              <  2:1414320‑M2/150‑122 (MQ=255)
                                                                                                                             aaCGGCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattt                         >  3:185652‑M2/1‑24 (MQ=255)
                                                                                                                                ggCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattc                                                                                                                             <  4:279228‑M2/47‑27 (MQ=255)
                                                                                                                                 ttgttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGa                     >  1:653780‑M2/15‑150 (MQ=255)
                                                                                                                                 gCATTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaa                                                                 >  2:1116008‑M2/1‑20 (MQ=255)
                                                                                                                                   gttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACa                   <  4:333789‑M2/138‑1 (MQ=255)
                                                                                                                                   aTTGTCGATTTGCCTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggag                   >  2:321257‑M2/1‑18 (MQ=255)
                                                                                                                                    ttcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAg                  >  2:201853‑M2/12‑150 (MQ=255)
                                                                                                                                     tcgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAgc                 >  1:162624‑M2/11‑150 (MQ=255)
                                                                                                                                      cgcaccttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGCTAACCTGGAATATGACCCGACAgcg                <  2:1564349‑M2/141‑1 (MQ=255)
                                                                                                                                           cttcCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCCATTATCGTTAACCTGGAATATGACCCGACAGCGGCGtt           >  2:408744‑M2/5‑150 (MQ=255)
                                                                                                                                               CCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACGTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGAGTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGc       >  1:920719‑M2/1‑150 (MQ=255)
                                                                                                                                               CCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGc       >  1:1142909‑M2/1‑150 (MQ=255)
                                                                                                                                                cTAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt      <  2:771563‑M2/150‑146 (MQ=255)
                                                                                                                                                 tAAGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt     >  4:470243‑M2/1‑4 (MQ=255)
                                                                                                                                                  aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    <  3:148662‑M2/150‑148 (MQ=255)
                                                                                                                                                  aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttc                                                                                                      <  1:1773224‑M2/52‑50 (MQ=255)
                                                                                                                                                  aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttc                                                                                                      >  2:1138740‑M2/1‑3 (MQ=255)
                                                                                                                                                  aaggaaggtgcgaataagcggggaaattcttctcggctgactcactcatttc                                                                                                      >  2:1773224‑M2/1‑3 (MQ=255)
                                                                                                                                                  aaGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAAt    <  3:712451/150‑1 (MQ=255)
                                                                                                                                                   aggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccaggtttta   <  3:615380‑M2/150‑149 (MQ=255)
                                                                                                                                                    ggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttag  >  2:876776‑M2/1‑1 (MQ=255)
                                                                                                                                                    ggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttag  <  4:686910‑M2/150‑150 (MQ=255)
                                                                                                                                                    ggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttag  >  1:1185007‑M2/1‑1 (MQ=255)
                                                                                                                                                    ggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttag  <  1:632943‑M2/150‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
CGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCA  >  NC_000913_3_bme_pgi/3992561‑3992858

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.