| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_bme_pgi | 4,141,192 | Δ1 bp | coding (1030/2502 nt) | frwA ← | putative PTS enzyme: Hpr, enzyme I and II components |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_bme_pgi | 4,141,189 | 0 | C | . | 93.5% | 818.2 / 49.2 | 184 | coding (1033/2502 nt) | frwA | putative PTS enzyme: Hpr, enzyme I and II components |
| Reads supporting (aligned to +/- strand): ref base C (6/6); new base . (87/85); total (93/91) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.82e-01 | |||||||||||
Only 100 of 194 total aligned reads displayed.
CTGCGCTTCCACGGAGTGAGCGATGTTAGCGGCAATTTCAATGCGGATACCGTCAGCGGTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTTCCCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTGAACGAACGGGCAAGGATCACCGTATGTGAGGTGGTGC > NC_000913_3_bme_pgi/4141040‑4141332 | gcgcTTCCACGGAGTGAGCGATGTTAGCGGCAATTTCAATGCGGATACCGTCAGCGGTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTTccc > 1:2030347/1‑150 (MQ=255) cgcTTCCACGGAGTGAGCGATGTTAGCGGCAATTTCAATGCGGATACCGTCAGCGGTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTTccct < 2:2030347/150‑2 (MQ=255) cgcTTCCACGGAGTGAGCGATGTTAGCGGCAATTTCAATGCGGATACCGTCAGCGGTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTTccct < 2:751326/150‑2 (MQ=255) aCGGAGTGAGCGATGTTAGCGGCAATTTCAATGCGGATACCGTCAGCGGTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCaa > 2:2465691/1‑150 (MQ=255) aGTGAGCGATGTTAGCGGCAATTTCAATGCGGATACCGTCAGCGGTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACcac > 2:2050148/1‑150 (MQ=255) aGCGATGTTAGCGGCAATTTCAATGCGGATACCGTCAGCGGTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTTTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAAc < 4:1495988/143‑1 (MQ=255) gCGATGTTAGCGGCAATTTCAATGCGGATACCGTCAGCGGTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCg > 4:1260721/1‑150 (MQ=255) gATGTTAGCGGCAATTTCAATGCGGATACCGTCAGCGGTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTTCCCCTGGCTCAACCACAATCGc > 4:918964/1‑150 (MQ=255) ttAGCGGCAATTTCAATGCGGATACCGTCAGCGGTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCgg < 1:2439499/150‑1 (MQ=255) ggCAATTTCAATGCGGATACCGTCAGCGGTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTg < 1:885701/150‑1 (MQ=255) aTTTCAATGCGGATACCGTCAGCGGTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGt < 4:787445/150‑1 (MQ=255) aTTTCAATGCGGATACCGTCAGCGGTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGt > 3:1292574/1‑150 (MQ=255) tttCCATGCGGATACCGTCAGCGGTACGGGCTTGTTTGGTCAGCCAGAGACGCTGTTGCTCACGCAGGGCGGCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTc > 4:1116869/1‑150 (MQ=255) tttCAATGCGGATACCGTCAGCGGTNCGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTc > 1:2231383/1‑150 (MQ=255) tttCAATGCGGATACCGTCAGCGGTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTc > 2:1471134/1‑150 (MQ=255) aTGCGGATACCGTCAGCGGTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGatat > 1:1774269/1‑150 (MQ=255) tGCGGATACCGTCAGCGGTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGAtata < 1:1572127/150‑1 (MQ=255) aTACCGTCAGCGGTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCg < 2:2270106/150‑1 (MQ=255) tACCGTCAGCGGTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGt < 3:61179/150‑1 (MQ=255) ccGTCAGCGGTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAAGCGCCCCGGCGTTGCCGTCGATATAAATCGttt < 2:1439649/150‑1 (MQ=255) tCAGCGGTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTttgtt > 1:812220/1‑150 (MQ=255) cAGCGGTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTttgttg < 1:1033357/150‑1 (MQ=255) gCGGTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTtgct < 4:302943/150‑1 (MQ=255) ggTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTtgctgc < 2:1711196/150‑1 (MQ=255) ggTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCCTCGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTtgctgc < 3:434329/150‑1 (MQ=255) tACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTTc > 3:1401475/1‑91 (MQ=255) tACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTTc < 4:1401475/91‑1 (MQ=255) aCGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCAc < 1:382244/150‑1 (MQ=255) cGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACg > 2:2543304/1‑150 (MQ=255) gggCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATc > 1:1449332/1‑106 (MQ=255) gggCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACgg > 1:2065915/1‑150 (MQ=255) ggCTTGTTGGGTCAGCCAGCCACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTGGCGGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCTCTAGCGCCCCGGCGTTGCCGTCGAGATAAATCGTTTGTTGCTGCCACGGa < 2:790963/150‑1 (MQ=255) ggCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGa > 1:333071/1‑150 (MQ=255) gCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGa > 4:1500783/1‑123 (MQ=255) gCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAg > 3:1089902/1‑150 (MQ=255) gCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAg > 2:216653/1‑150 (MQ=255) gttgGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAg > 2:1595372/1‑150 (MQ=255) ggTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTTCCCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGc > 3:1199574/1‑150 (MQ=255) gTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGt > 1:1678289/1‑111 (MQ=255) tCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAg < 1:1189410/144‑1 (MQ=255) tCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATc < 1:1471134/150‑1 (MQ=255) tCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATc > 1:613743/1‑150 (MQ=255) aGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGcc < 2:309603/106‑1 (MQ=255) aGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCaa < 1:1305583/150‑1 (MQ=255) gCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAat > 2:1401651/1‑150 (MQ=255) ccAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAata > 2:118670/1‑150 (MQ=255) aGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATc > 2:444830/1‑150 (MQ=255) acacGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCca > 1:898431/1‑150 (MQ=255) acacGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCca < 2:442322/150‑1 (MQ=255) acacGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCAACAATATCca > 3:423922/1‑150 (MQ=255) acGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACgg < 2:889509/128‑1 (MQ=255) tGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCGCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACaccaa > 3:1188188/1‑150 (MQ=255) gCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCt < 3:860397/65‑1 (MQ=255) cTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGc < 2:2216426/150‑1 (MQ=255) tCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGttt < 2:114602/105‑1 (MQ=255) tCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGttt > 1:114602/1‑105 (MQ=255) tCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCg > 1:1949615/1‑150 (MQ=255) tCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCg > 1:1406237/1‑150 (MQ=255) aCGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCAc < 2:2496032/114‑1 (MQ=255) aCGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGtt > 1:2000356/1‑150 (MQ=255) cGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTg > 2:2370914/1‑150 (MQ=255) cAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACGATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGa < 1:1726547/150‑1 (MQ=255) aGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAgg < 3:224395/119‑1 (MQ=255) aGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAgg > 4:224395/1‑119 (MQ=255) cGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCAt > 3:1145954/1‑119 (MQ=255) cGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCAt < 4:1145954/119‑1 (MQ=255) cGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGtt > 1:2182864/1‑150 (MQ=255) tCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTga > 2:1510345/1‑150 (MQ=255) tCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTga > 4:631605/1‑150 (MQ=255) ccTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTgaa < 3:1338734/150‑1 (MQ=255) tGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTTCCCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTgaac < 3:1584995/150‑1 (MQ=255) tGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACaccaac > 1:2504362/1‑130 (MQ=255) tGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACaccaac < 2:2504362/130‑1 (MQ=255) gTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTgaacga > 2:548923/1‑150 (MQ=255) tACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGtt < 1:1052340/143‑1 (MQ=255) tACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGtt > 2:1052340/1‑143 (MQ=255) tACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGt > 1:552305/1‑142 (MQ=255) tACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTgaacgaa < 1:2465691/150‑1 (MQ=255) gcgGGCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTaa > 2:1980174/1‑103 (MQ=255) gggCTTCTTGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTGAACGAACGGGc < 2:333071/150‑1 (MQ=255) ttcttGCTGATAATAACGAGCTACGGCTTCCCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACaccaa > 2:1828578/1‑119 (MQ=255) ttcttGCTGATAATAACGAGCTACGGCTTCCCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACaccaa < 1:1828578/119‑1 (MQ=255) ttcttGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTGAACGAACGGGCAAgg < 1:2041790/150‑1 (MQ=255) cttGCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTGAACGAACGGGCAAGGAt > 2:27757/1‑150 (MQ=255) gCTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTGAACGAACGGGCAAGGATCAc < 1:1493353/150‑1 (MQ=255) cTGATAATAACGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGTGCATCAATATCCACACCAACCAGCGTTGGAATGTTGAACGAACGGGCAAGGATCAcc > 1:293422/1‑150 (MQ=255) atGATAATCACGCGCTCCGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGATGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCACCCAGCGTTGGAATGTTGAACGAACGGGCAGGGATCAcc < 2:1315536/149‑1 (MQ=255) ataataACGAGCTACGGCTTCCCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGc < 3:1496866/115‑1 (MQ=255) taataaCGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTGAACGAACGGGCaa < 4:132021/138‑1 (MQ=255) taataaCGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTGAACGAACGGGCAAGGATc > 2:1660146/1‑143 (MQ=255) taataaCGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTGAACGAACGGGCAAGGATc < 1:1660146/143‑1 (MQ=255) taaCGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGccc < 1:1367447/39‑1 (MQ=255) aaCGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTGAACGAACGGGCAAGGATCACCGTa > 1:1753238/1‑145 (MQ=255) aaCGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTGAACGAACGGGCAAGGATCACCGTa < 2:1753238/145‑1 (MQ=255) cGAGCTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTttgt < 3:994668/65‑1 (MQ=255) cTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTGAACGAACGGGCAAGGATCACCGTAt > 2:1203042/1‑140 (MQ=255) cTACGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTGAACGAACGGGCAAGGATCACCGTATGTGAggtggt < 1:444830/150‑1 (MQ=255) aCGGCTT‑CCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTGAACGAACGGGCAAGGATCACCGTATGTGAGGTGGTgc > 2:687607/1‑150 (MQ=255) ggCTTCCCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTGAACGAACGGGCAAGGATCACCGt > 1:1847399/1‑135 (MQ=255) ggCTTCCCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTGAACGAACGGGCAAGGATCACCGt < 2:1847399/135‑1 (MQ=255) | CTGCGCTTCCACGGAGTGAGCGATGTTAGCGGCAATTTCAATGCGGATACCGTCAGCGGTACGGGCTTGTTGGGTCAGCCAGACACGCTGTTGCTCACGCAGGGCGTCCTGTACGCGGGCTTCTTGCTGATAATAACGAGCTACGGCTTCCCCTGGCTCAACCACAATCGCCCCGGCGTTGCCGTCGATATAAATCGTTTGTTGCTGCCACGGAGTAAGGGCATCAATATCCACACCAACCAGCGTTGGAATGTTGAACGAACGGGCAAGGATCACCGTATGTGAGGTGGTGC > NC_000913_3_bme_pgi/4141040‑4141332 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |