New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_pgi	= 16653	NA (NA)	8 (0.110)	7/282	7.8	NA	intergenic (+96/+98)	insL1/hokC	IS186 transposase/toxic membrane protein, small
	?	NC_000913_3_hsa_pgi	= 16691	NA (NA)					intergenic (+134/+60)	insL1/hokC	IS186 transposase/toxic membrane protein, small
Rejected: Coverage evenness skew score above cutoff.

TCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCAACCTCCGTCTGGCCAGTT  >  NC_000913_3_hsa_pgi/16587‑16799                                                                   |                                                                                                                                                   tCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCAc                                                                  >  2:177060/1‑149 (MQ=32)    ggAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCAGTCTTCAGATGGTTCACCCCTTAAGTTAGCGCTTATGGGATCACTcc                                                               >  2:450350/1‑149 (MQ=21)        cTTACAGGTGGCCATTCGTGGGACAGTACCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCTTCGTCTTAACGAGGCACCGAGGCGGCGCTTTCTTCAGATGGTGCAACCCTTAAGTTAGCGCTTATGGGATCACTCCccgc                                                           <  2:1172545/149‑1 (MQ=11)          tACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGCCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGGTCAACCCTTAAGTAAGCGCTTATGGGATCACTCCccgccg                                                         <  1:518567/149‑1 (MQ=255)           aCAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGt                                                        <  2:457410/149‑1 (MQ=38)           aCAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACACTTAAGTTAGAGCATATGGGATCACTCCCCGCCGt                                                        >  1:690406/1‑149 (MQ=255)             aGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTg                                                      >  2:1025726/1‑149 (MQ=39)              gggggCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCCTCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGc                                                     <  1:898560/146‑1 (MQ=255)                tGGCCATTCGTGGAACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATTCTTCAACCATTAAGTTAGCGCTTATGGGATCACTCACCGCCGTTGctc                                                   >  2:1108580/1‑149 (MQ=14)                    cATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTAc                                               <  1:902561/149‑1 (MQ=255)                      ttCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTc                                             <  2:15169/149‑1 (MQ=255)                      ttCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTc                                             >  2:1039279/1‑149 (MQ=255)                       tCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCg                                            <  2:1022956/149‑1 (MQ=255)                          tGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACTCGAGGCATCGTCTTCACGACGCACCGAGGCCTCGCAATCTTCAGATGGTTCAACCCTTAAGGTAGCGCTTATGCGATCACTCCCCGCCGTTGCTCTTACTCGGAt                                         >  2:669377/1‑149 (MQ=17)                          tGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCATCCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGAt                                         >  1:436777/1‑149 (MQ=255)                          tGGGACAGTATCCCTGACAGCCTACAAAACGCAATTCAAGAACGCGCGGCATCGTCTTAACGAGGCACCGAGGCGTCGCAATCTTCAGATGGTTCAACCCTTTAGTTAGCGCTTATGGGATCACTCCCCGACGTTGCTCTTACTCGGAt                                         >  2:551201/1‑149 (MQ=14)                          ggtgACAGTATCCCTGACAGCCTACAAAACGCAATTGTAGAACGCGAGGCATCGTCTTAACGAGGCCCCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATTGGATCACTCCCCGCCGTTGCTCTTACTCGGAt                                         <  2:972974/146‑1 (MQ=255)                             gACAGTTTCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCCTTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCg                                      >  1:72698/1‑149 (MQ=255)                                aGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTaa                                   >  1:460861/1‑149 (MQ=255)                                  tATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGc                                 >  1:74681/1‑149 (MQ=255)                                      ccTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTg                             >  2:961739/1‑149 (MQ=255)                                       cTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGa                            >  1:346506/1‑149 (MQ=255)                                       cTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGa                            >  1:1158784/1‑149 (MQ=255)                                            aGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCAACGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAcaca                       >  2:254762/1‑149 (MQ=255)                                              ccTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGc                     <  2:675240/149‑1 (MQ=255)                                               cTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGt                                                        <  2:174912/113‑1 (MQ=40)                                               cTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGt                                                        >  1:174912/1‑113 (MQ=40)                                                 aCAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTAAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAACACAGCAAc                  >  2:1185156/1‑149 (MQ=255)                                                    aaaCGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCCCTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAACACAGCAACCTc               >  1:91301/1‑149 (MQ=255)                                                     aaCGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACACTTAAGTTAGCGGTGATGGGATCAATCCCCGCAGTTGCACTTACTCGGATTCTTAATCCGTGAAAACAGCATCCtgc              >  1:146052/1‑147 (MQ=17)                                                        gCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCACCCTCCGTc           >  1:660020/1‑149 (MQ=255)                                                        gCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCAACCTCCGTc           >  1:32764/1‑149 (MQ=255)                                                          aaTTGAAGAACGCGAGGCATCGTCTTACCGCGGCACCGCGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCAACCTCCGTCTg         >  1:1136780/1‑149 (MQ=255)                                                          aaTTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCACCCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTGGCTATTACTCGGATTCGAAAGCCGAGAAAACAGCAACCTCCGTCTg         >  2:679796/1‑149 (MQ=18)                                                          aaTTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCAACCTCCGTCTg         >  1:757697/1‑149 (MQ=255)                                                           aTTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCAACCTCCGTCTgg        >  2:1220828/1‑149 (MQ=255)                                                              gaagaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCAACCTCCGTCTGGCCa     <  2:620919/149‑1 (MQ=255)                                                               aagaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCAACCTCCGTCTGGCCAg    <  2:538507/149‑1 (MQ=255)                                                                 gaaCGCGAGGCATCGTCTTACCGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGCTTCGTAAGCCGTGAAAACAGCAACCTCCGTCTGGCCAGtt  <  2:675534/149‑1 (MQ=255)                                                                 gaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCAACCTCCGTCTGGCCAGtt  <  2:888602/149‑1 (MQ=255)                                                                   |                                                                                                                                                   TCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCAACCTCCGTCTGGCCAGTT  >  NC_000913_3_hsa_pgi/16587‑16799

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.