Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913_3_hsa_pgi 3,815,824 G→T intergenic (‑56/+10) pyrE ← / ← rph orotate phosphoribosyltransferase/ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913_3_hsa_pgi3,815,8240GT98.7% 233.8 / ‑4.5 76intergenic (‑56/+10)pyrE/rphorotate phosphoribosyltransferase/ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base T (33/42);  total (34/42)
Fisher's exact test for biased strand distribution p-value = 4.47e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.93e-01

TGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGT  >  NC_000913_3_hsa_pgi/3815681‑3815969
                                                                                                                                                |                                                                                                                                                 
tGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTa                                                                                                                                              <  2:293657/149‑1 (MQ=255)
tGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATGCAATAACCTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTa                                                                                                                                              <  1:952482/149‑1 (MQ=255)
     ccGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAAt                                                                                                                                         >  2:534001/1‑149 (MQ=255)
      aggATTTCAGCGTAAACTCGCCAAACTTTAACACATGCTTGCTAAGCGAAAATTAAATAAACTTTCGCTGATATTGTTTCATGACTTCGCTCCTCATATTACTTTTCAAAAGACAAAAAAAAGGCGACTCATCATTCTCCTTAAAAATc                                                                                                                                        <  2:708963/148‑1 (MQ=255)
           ttCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAAACAGttt                                                                                                                                   >  1:564333/1‑149 (MQ=255)
             cAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGc                                                                                                                                 <  1:769098/149‑1 (MQ=255)
             cAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCAAGCCTTAGCTCATCATCTTACTTTTCTACATACAAAAAAAAGGCGACTCATCAGTCTCCGTAAAAATCAGTTTGc                                                                                                                                 >  1:665921/1‑149 (MQ=255)
              aGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCGCATCTTACTTTTCTACAGACAAAAAAAAGGAGACTCATCAGTCTCAGTAAAAATCAGTTTGcc                                                                                                                                >  1:599889/1‑149 (MQ=255)
                    aaCTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAAATCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGcgcc                                                                                                                          <  2:249473/149‑1 (MQ=255)
                           cAAACTTTAACACCTGCTTGCTAAGCGCAAATTAAATAAACTGTCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCt                                                                                                                   <  1:529375/149‑1 (MQ=255)
                            aaaCTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTg                                                                                                                  <  1:247850/149‑1 (MQ=255)
                              aCTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCg                                                                                                                <  1:262536/149‑1 (MQ=255)
                                 ttAACTCCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCg                                                                                                             <  2:557133/149‑1 (MQ=255)
                                 ttAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAACGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCg                                                                                                             <  1:484381/149‑1 (MQ=255)
                                  tAACACATGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATTTGGTTTAATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGc                                                                                                            <  2:1197542/149‑1 (MQ=255)
                                    ccacCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAACAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTa                                                                                                          >  2:246633/2‑149 (MQ=255)
                                    acacCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTa                                                                                                          <  1:628025/149‑1 (MQ=255)
                                      acCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCGTTAAAAATCAGTTTGCCAGCGCCGCCTACTGCGTCGCTaaa                                                                                                        >  2:98868/1‑147 (MQ=255)
                                          gcttgctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATgg                                                                                                    >  1:386732/1‑149 (MQ=255)
                                              tctAAGCGCAAATTCAATAAACTGGCGCTGATATGGGTTCATGCCTTCGGTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGgattc                                                                                                <  1:327446/148‑1 (MQ=255)
                                              gctAAGCGCAAATTCAATAAACTGTCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGgattc                                                                                                <  1:534001/149‑1 (MQ=255)
                                              gctAAGCGCAAATTCAATAAACTGGCGCTGTTATGTTTTCTTGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGgattc                                                                                                <  2:329922/149‑1 (MQ=255)
                                              gctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCAACAGACAAAAAAAAGGCGACTCAGCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGgattc                                                                                                <  1:815800/149‑1 (MQ=255)
                                               ctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGgattcg                                                                                               >  2:986730/1‑149 (MQ=255)
                                               ctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGgattcg                                                                                               >  1:1090704/1‑149 (MQ=255)
                                               ctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGgattcg                                                                                               >  1:956615/1‑149 (MQ=255)
                                                tAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAAGGCGACTCATCAGGCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGgattcc                                                                                               >  1:1040584/1‑148 (MQ=255)
                                                tAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCGTTCTGCGTCGCTACAATGgattcgc                                                                                              >  2:308098/1‑148 (MQ=255)
                                                tAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCGTCTGCGTCGCTACAAGGgattcgc                                                                                              >  2:83300/1‑148 (MQ=255)
                                                   gcgcAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGgattcgattc                                                                                           <  1:1101499/149‑1 (MQ=255)
                                                         aTTCAATAAACTGGCGCTGATATGGTTTCATGACTTCGCTCCTCATCTTAATTTTCTACAGACTAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCTTCGCTACAATGGATTCGATTCCCCTCg                                                                                     <  1:252158/149‑1 (MQ=255)
                                                           tCAATAAACTGGCGGTGTTATGGTTTCATGCCTTCGCGCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCggg                                                                                   <  2:599889/149‑1 (MQ=255)
                                                            cAATAAACTGGCGCTTATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGc                                                                                  <  1:1148726/149‑1 (MQ=255)
                                                               tAAACTTGCGCTGATATGGTTTCATGACTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCAGCAGTCTCCTTAAAAATCAGTTTTCCAGCGCCGCCTTCTGCGTCGCTCCAATGGAGACGATTGCCCGCGGGcccg                                                                               >  1:64602/1‑147 (MQ=255)
                                                               tAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCAACAATGGATTCGATTCCCCTCGGGCCag                                                                               <  2:878704/149‑1 (MQ=255)
                                                                aaaCTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAACAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCaga                                                                              <  2:665921/149‑1 (MQ=255)
                                                                     ggCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCcaa                                                                         <  1:1238096/149‑1 (MQ=255)
                                                                      gcgcTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCcaac                                                                        <  1:481474/149‑1 (MQ=255)
                                                                      gcgaTGATTTTGTTTCATTCCTTCGATCCTCAACTTACTTTTCCACAGACAAAAAATAGTCGACTCAACATTCTCCTTAAAAATCAGTTTTCAAGCGCGGCCTTCTGCGGCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCcaac                                                                        <  1:827391/149‑1 (MQ=255)
                                                                       cgcTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGgatt                                                                                                 >  1:1177290/1‑123 (MQ=255)
                                                                       cgcTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGgatt                                                                                                 <  2:1177290/123‑1 (MQ=255)
                                                                       cgcTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCcaaca                                                                       <  1:1023190/149‑1 (MQ=255)
                                                                          tGAAATGGTTTCAGGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGa                                                                    <  2:299767/149‑1 (MQ=255)
                                                                           gATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGAt                                                                   <  2:117357/149‑1 (MQ=255)
                                                                             tatGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGa                                                                 <  2:366418/149‑1 (MQ=255)
                                                                              atGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTGATCAGTCTCCTTAAAAATCAGTTTGCCTGCGCCGAGTTCTGCGTCGCTACAATGGTTTCGCTTGCCCTCGGGCCAGAGCCAACAAGATGAg                                                                >  1:714673/1‑149 (MQ=255)
                                                                                         ccTTCGCTCCTCATCTTACTATTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGCGCCAACAAGATGAGTAGCTCTTCAt                                                     >  1:455964/1‑149 (MQ=255)
                                                                                           ttCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCGTTCTGCGTCGCTACAATGGATTCGATTCCCATCGGGCCAGAGCCAACAAGATGATTAGCTCTTAAttg                                                   >  2:673937/1‑147 (MQ=255)
                                                                                            tCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATggg                                                  <  1:986730/149‑1 (MQ=255)
                                                                                             cGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAACAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGt                                                 <  1:673937/149‑1 (MQ=255)
                                                                                              gCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTg                                                >  1:134086/1‑149 (MQ=255)
                                                                                                tcctcATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGACTCCTTAAAAATCAGTTTGCCAGCGCCTCCTTCTGCGTCGCTACAATGGATTCTATTCCCCTAGGGCCAGAGCCAACAAGATGAGTAGCTCTACATGGGTGaa                                              >  1:313954/1‑149 (MQ=255)
                                                                                                  ctcATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGAAGCTCTTAATGGGTGAAcc                                            >  1:281106/1‑148 (MQ=255)
                                                                                                    cATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCACCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGc                                          >  1:923160/1‑149 (MQ=255)
                                                                                                    cATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCACCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGc                                          >  1:647965/1‑149 (MQ=255)
                                                                                                    cATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCACCGCCGTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGCGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGc                                          >  1:1113474/1‑149 (MQ=255)
                                                                                                     aTCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAt                                                     >  2:999278/1‑137 (MQ=255)
                                                                                                     aTCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAt                                                     <  1:999278/137‑1 (MQ=255)
                                                                                                     aTCTTACATTTCTACCTACATATAACAGGCGACTCATCAGTCTCATTAAAACTCAGTGTGGCAGCGCCGCCTTCTGCGACGCTACAATGGATTCGATTCCCCTTGGGACAGAGCCAACAAGATGAGTAGCTCTTCATGGGTTAACGGCt                                         <  2:1187637/149‑1 (MQ=255)
                                                                                                        ttACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTTCAATGGAGTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGc                                      >  2:172914/1‑149 (MQ=255)
                                                                                                        ttACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGc                                      >  1:75905/1‑149 (MQ=255)
                                                                                                            ttttCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTc                                  <  1:221587/149‑1 (MQ=255)
                                                                                                             tttcatcAGACAAAAAAAACGCGAGTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTAGAATGGATTCGATTCCCCTCGGGCCAGAGCCAAGAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCt                                 <  2:493060/143‑1 (MQ=255)
                                                                                                              ttCTACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAACTCCGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTg                                <  2:707407/149‑1 (MQ=255)
                                                                                                                 tACAGACAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTATGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGATCCAACAAGATGAGTAGCTCGTCATGGGTGACCGGCTCGCCTTCTGCCg                             >  2:1147951/1‑149 (MQ=255)
                                                                                                                      aCAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACTGCTCGCCTTCTGCCGTcccg                        >  1:85279/1‑148 (MQ=255)
                                                                                                                      aCAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTcccc                        >  1:845439/1‑149 (MQ=255)
                                                                                                                      aCAAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTcccc                        >  1:363487/1‑149 (MQ=255)
                                                                                                                          aaaaaaaGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGCGCCAACAAGATGAGTAGCTCTGCATGGGTGAACGGCTCGCCTTCTGCCGTGCCCTGc                     >  2:1156257/1‑149 (MQ=255)
                                                                                                                                aGGAGACTGATGAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCa               >  1:1184303/1‑149 (MQ=255)
                                                                                                                                    gACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAatga           >  1:512161/1‑149 (MQ=255)
                                                                                                                                         atcaGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATgcgc      <  2:573563/149‑1 (MQ=255)
                                                                                                                                           caGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATAGATTCGCTTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGATCGGCTCGCCTTCTGCCGTCCCCTGCACTTCACTGATGCGccc    <  2:564333/149‑1 (MQ=255)
                                                                                                                                           caGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTGCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGccc    <  1:795049/149‑1 (MQ=255)
                                                                                                                                             gTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGt  <  2:1090704/149‑1 (MQ=255)
                                                                                                                                             gTCTCCTTAAAAATCAGTGTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATGCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGt  <  2:956615/149‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                                 
TGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGT  >  NC_000913_3_hsa_pgi/3815681‑3815969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: