New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi 1207790 =11 (0.120)58 (0.710) 49/266 0.7 86.1% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913_3_hsa_pgi 1209619 = 9 (0.110)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

Only 100 of 142 total aligned reads displayed.

TGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGG  >  NC_000913_3_hsa_pgi/1207642‑1207937
                                                                                                                                                    |                                                                                                                                                   
tGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTT                                                                                                                                                    >  1:1419071‑M1/1‑150 (MQ=255)
   atcctgcacagttcagcgcattacgttgtagatatgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGt                                                                                                                                                 <  2:76354‑M1/5‑1 (MQ=255)
        ggtggAGGTATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG                                                                                                                                            <  2:1094111‑M1/150‑1 (MQ=255)
        gcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTggg                                                                                                                                            <  2:228611‑M1/10‑1 (MQ=255)
        gcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTggg                                                                                                                                            >  1:88630‑M1/141‑150 (MQ=255)
          acagttcagcgcattacgttctagatctgtgttctggtcatttgttgatacgcgtacatagccaataagaatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGgag                                                                                                                                          >  2:202345‑M1/139‑150 (MQ=255)
             gttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAg                                                                                                                                       <  1:183922‑M1/15‑1 (MQ=255)
              ttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAgg                                                                                                                                      >  1:877106‑M1/135‑150 (MQ=255)
                cagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcagtaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAg                                                                                                                                    <  2:1120957‑M1/18‑1 (MQ=255)
                cagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAg                                                                                                                                    >  2:225760‑M1/133‑150 (MQ=255)
                cATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGct                                                                                                                                    >  2:968411‑M1/1‑148 (MQ=255)
                 agcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGc                                                                                                                                   <  1:1357123‑M1/19‑1 (MQ=255)
                 aTCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGAGCGCTGCTGTTTAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCTAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctg                                                                                                                                   >  1:1245944‑M1/1‑147 (MQ=255)
                   ccGGTGCCAGCCAGGAGAAGGGGCTGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTATGCCGCATGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctg                                                                                                                                 >  1:98551‑M1/1‑145 (MQ=255)
                     cattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCaaaa                                                                                                                               <  2:1293516‑M1/23‑1 (MQ=255)
                        tacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTc                                                                                                                            >  1:198736‑M1/125‑150 (MQ=255)
                         ccAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTGTGGTGAAGGAGCAAAACTCa                                                                                                                           >  1:851759/1‑150 (MQ=255)
                          cgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCaa                                                                                                                          <  1:491702‑M1/28‑1 (MQ=255)
                          cAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacc                                                                                                                          <  2:1040634‑M1/150‑13 (MQ=255)
                           gttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttccttttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAAt                                                                                                                         >  1:682762‑M1/122‑150 (MQ=255)
                           gttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAAt                                                                                                                         >  1:928847‑M1/122‑150 (MQ=255)
                           aGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacct                                                                                                                         >  1:942747‑M1/1‑137 (MQ=255)
                             tgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgc                                                                                                                       <  2:8114‑M1/31‑1 (MQ=255)
                              gtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaacgcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgca                                                                                                                      <  2:658233‑M1/32‑1 (MQ=255)
                                ggAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttgg                                                                                                                    <  1:246191‑M1/150‑19 (MQ=255)
                                ggAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttgg                                                                                                                    <  1:499753‑M1/150‑19 (MQ=255)
                                ggAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttgg                                                                                                                    <  1:133176‑M1/150‑19 (MQ=255)
                                ggAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttgg                                                                                                                    <  1:648165‑M1/150‑19 (MQ=255)
                                agatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgcagc                                                                                                                    >  1:480186‑M1/117‑150 (MQ=255)
                                       gggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccg                                                                                                             <  1:1043100‑M1/150‑26 (MQ=255)
                                        gttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTa                                                                                                            >  2:1206142‑M1/109‑150 (MQ=255)
                                          cggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggtt                                                                                                          <  1:1040306‑M1/150‑29 (MQ=255)
                                             ggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTa                                                                                                       <  2:508278‑M1/47‑1 (MQ=255)
                                               cGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGGTTGGCGATATCACATCGGATGGCACTGTGCAAACGGCTCTCGAAATCCTTGGTGTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAgg                                                                                                     >  1:241143/1‑150 (MQ=255)
                                                aatttgttgataagagtacatagccaataagcatgttaaatcccgctggtaaatgcaggaatgatgccatttgcttgttatttcttcattttcttaaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTaggt                                                                                                    >  2:307325‑M1/101‑149 (MQ=255)
                                                 aCCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggc                                                                                                   <  2:195641‑M1/150‑36 (MQ=255)
                                                     gttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAc                                                                                               >  2:423888‑M1/96‑150 (MQ=255)
                                                     gTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCGGTTTGGCGATATCAAATCGGATGCCACTGTGCAAACGGCTCTCGAAAACCTTGGTTAGGGAGCAGGctctccattacgtgttggtgtcccggttccgtggcctta                                                                                               >  1:1269454‑M1/1‑111 (MQ=255)
                                                         cttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcc                                                                                           <  1:1164385‑M1/150‑44 (MQ=255)
                                                         cttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGGTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcc                                                                                           >  2:278033‑M1/1‑107 (MQ=255)
                                                          tacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcattaacgTTGGTTTGGTAGAAGGAGCAATAATCAATGCAGCAACGGCTACATTAGGACGCACAGGtt                                                                                          <  1:988543‑M1/60‑1 (MQ=255)
                                                            cgcgtacatagccaataagcatgttaaatcccactggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTc                                                                                        >  2:1357123‑M1/89‑150 (MQ=255)
                                                              cGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactcc                                                                                      <  1:552531‑M1/150‑49 (MQ=255)
                                                              cGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactcc                                                                                      >  1:944265‑M1/1‑102 (MQ=255)
                                                              cGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCAt                                                                                      <  1:1101040/150‑1 (MQ=255)
                                                              cGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCGTGGTTTGGGAGATGGctctgctttacctgttggtgtcccggttccgtggccttcagccactcc                                                                                      >  2:405558‑M1/1‑102 (MQ=255)
                                                                tacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGTGAGAAGGAGCAAAACTCAATGCAGCAACTGCTACATTAGGACGCACCTTTTTAATAg                                                                                    <  1:1014098‑M1/66‑1 (MQ=255)
                                                                tacatagccaataagcatggtaaatccccctggtaaaagcaggaatgatgccatttgcttgatatttcttcatattcataaacgTTGGTTTGGGAGAACGAGCAAAACTCAATGCAGCAACGGCGACAATAGGACGCACCGGTTTCATAg                                                                                    >  2:566824‑M1/85‑150 (MQ=255)
                                                                      gccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAc                                                                              <  1:616271‑M1/72‑1 (MQ=255)
                                                                       ccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAcc                                                                             >  1:76354‑M1/78‑150 (MQ=255)
                                                                       ccaagaagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttggtagttcttcagtttcataaacgTTAGTTTGGGAGAAGTAGCAAAACTCAATGCCGCAACGGCTACATTAGTACGCACCGTTTTCTTAGCTAGAcc                                                                             <  2:1273914‑M1/73‑1 (MQ=255)
                                                                          ataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGt                                                                          >  1:491175‑M1/75‑150 (MQ=255)
                                                                           ctgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgcccagaggctgg                                                                         >  2:656367‑M1/1‑89 (MQ=255)
                                                                            tgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggc                                                                        <  1:968411‑M1/150‑63 (MQ=255)
                                                                            tgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggc                                                                        <  1:513224‑M1/150‑63 (MQ=255)
                                                                             gctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTAt                                                                       >  1:317060/1‑150 (MQ=255)
                                                                                  tAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaat                                                                  <  1:1468545‑M1/150‑69 (MQ=255)
                                                                                   aaGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCATGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgaggccttcagccacgccgccaacaggctggctgaaatg                                                                 >  2:1310364‑M1/1‑81 (MQ=255)
                                                                                     gCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgca                                                               >  1:1156214‑M1/1‑79 (MQ=255)
                                                                                     aaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcatgaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg                                                               >  1:938725‑M1/64‑150 (MQ=255)
                                                                                     aaatccccctgggaaaagcagtaaagatgccctttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGAACAACTCAATGGAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTAGGATtggtg                                                               >  1:792308‑M1/64‑150 (MQ=255)
                                                                                      ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaccaggctggctgaaatgcaa                                                              >  2:598247‑M1/1‑78 (MQ=255)
                                                                                      ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtgg                                                              <  2:317060/150‑1 (MQ=255)
                                                                                      aatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtgg                                                              >  1:1120957‑M1/63‑150 (MQ=255)
                                                                                       atccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTggtggt                                                             <  1:525750‑M1/89‑1 (MQ=255)
                                                                                         ccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAt                                                           >  2:1202716‑M1/60‑150 (MQ=255)
                                                                                           aGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGGGGTATTg                                                         <  2:191291/150‑1 (MQ=255)
                                                                                              aTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGTctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccg                                                      >  1:598444‑M1/1‑70 (MQ=255)
                                                                                                ccGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgct                                                    >  2:878429‑M1/1‑68 (MQ=255)
                                                                                                ccGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgct                                                    <  1:700171‑M1/150‑83 (MQ=255)
                                                                                                  aaaagcaggaagtatgccatttgcttgttctttcttcattttcataaacgTTGGTTTGGGAGAAGTAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATc                                                  >  2:1014098‑M1/51‑150 (MQ=255)
                                                                                                   tttGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttt                                                 <  2:1419071‑M1/150‑86 (MQ=255)
                                                                                                    ttGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgcttttc                                                <  1:878429‑M1/150‑87 (MQ=255)
                                                                                                     tGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttc                                               >  1:227135‑M1/1‑63 (MQ=255)
                                                                                                       gCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTATGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTaa                                             <  2:716543/150‑1 (MQ=255)
                                                                                                             tgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCatta                                       <  1:372996‑M1/111‑2 (MQ=255)
                                                                                                              cAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAt                                                   >  2:1274201/1‑137 (MQ=255)
                                                                                                              cAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAt                                                   <  1:1274201/137‑1 (MQ=255)
                                                                                                               atgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAg                                     >  1:658233‑M1/38‑150 (MQ=255)
                                                                                                               aaaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaa                                     >  1:122564‑M1/1‑53 (MQ=255)
                                                                                                               aaaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgatggtgtcccggttccgtggccttcagccactccgcccacaggctggctgaaatgcaatggtgccgctttttctgctgaagaa                                     >  2:775927‑M1/1‑53 (MQ=255)
                                                                                                                     gATGGCACTGTGCAAAAGGCTCTCGAAAACATTGGTTTGGGAGAAGGctctgcattacctgttggagtccaggttccgtggccttcagccactcccccaacaggctggctgaaatgaaatggtgccgctttttctgatgaagaatacacg                               >  2:265122‑M1/1‑47 (MQ=255)
                                                                                                                       tgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTg                             >  2:183922‑M1/30‑150 (MQ=255)
                                                                                                                         gCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaac                           <  2:452967‑M1/150‑108 (MQ=255)
                                                                                                                         cttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGTGGTGGa                           <  1:903940‑M1/123‑1 (MQ=255)
                                                                                                                             ttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGc                       >  2:496580‑M1/24‑150 (MQ=255)
                                                                                                                             tgtgCAAACGGCTCGCGAAAACCTTGGGTTGGGAGAAGGctctgcattagctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggt                       <  2:862663‑M1/150‑112 (MQ=255)
                                                                                                                                gCAAACGGCTCTCGAAAGCCTTGGTTTGGGAGAAGGctctgcattacctgtaggtgtcccggttccgtggccttcaggcactcagccaccaggctggctgaaatgcaatggtgccgcttgttctggtgaagaatacccggagctggcaag                    >  2:1002429‑M1/1‑36 (MQ=255)
                                                                                                                                 ttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGGAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCa                   >  1:859473‑M1/20‑150 (MQ=255)
                                                                                                                                 cAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaag                   <  1:1230425‑M1/150‑116 (MQ=255)
                                                                                                                                  aaaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaagg                  <  2:944265‑M1/150‑117 (MQ=255)
                                                                                                                                      cattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGc              >  1:508278‑M1/15‑150 (MQ=255)
                                                                                                                                       attttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCa             <  2:660208‑M1/137‑1 (MQ=255)
                                                                                                                                        ctctCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatc            <  1:656838‑M1/150‑123 (MQ=255)
                                                                                                                                            ctaaacccTTGTTTTGTGATAATGctctgcattacctgttggtgtcccttttccttggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgac        <  2:1245944‑M1/148‑127 (MQ=255)
                                                                                                                                            cataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGc        <  1:652384‑M1/142‑1 (MQ=255)
                                                                                                                                            cataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGc        <  1:1371037‑M1/142‑1 (MQ=255)
                                                                                                                                             gAAAACCTTGGTTTGGGAGAAGGctctgaataacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaataccaggaacttgcaaaggcttatccgaca       >  2:175287‑M1/1‑23 (MQ=255)
                                                                                                                                               aaaCCTTGGGTGGGGAGAAGGAGCAAAACTCAATGCACCAACGGCTACATTAGGACTCACCGGGTTCATAGCTATACCGGTTATGATTGGTGGTATTGATCAATCAGTACTCATTCAGGGGGGGTGGAATGCCGCAAAAGCATCTGCctc     <  2:851759/150‑1 (MQ=255)
                                                                                                                                                  cgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGGCGCACCGGTTTCATAGCTAGACCGGTTATGATTGGGGGTATTGAGCAATCAGTAATCCTACAGTGGGGGAGGAATGCCGCAAAAGGCTCtgcctcggg  <  2:1351279‑M1/148‑4 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
TGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGG  >  NC_000913_3_hsa_pgi/1207642‑1207937

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.