New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi = 12078059 (0.090)64 (0.760) 47/264 0.9 87.7% coding (305/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913_3_hsa_pgi = 1209602 10 (0.120)pseudogene (18/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

GTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTG  >  NC_000913_3_hsa_pgi/1209457‑1209750
                                                                                                                                                 |                                                                                                                                                    
gTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGcct                                                                                                                                                   <  2:241865‑M2/149‑4 (MQ=255)
  aaaTCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttc                                                                                                                                                 <  2:1523239‑M2/149‑6 (MQ=255)
  aaaTCAGGCAATTTATTTGTCGGATAAGCCTTTGACAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGTCTTTAGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttc                                                                                                                                                 >  1:1342758‑M2/1‑144 (MQ=255)
   aaTCAGGCAATTTTTATGTCGGATAAGGCTTTGCCAGTTCCGTGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGGTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACTGGTAATGCAGAGccttct                                                                                                                                                >  1:653789‑M2/1‑143 (MQ=255)
       aGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTTCAGGCCACGGAAGCGGGACACCAACAGGTAATGCAGAGccttctccca                                                                                                                                            <  2:315034‑M2/149‑11 (MQ=255)
       aGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctccca                                                                                                                                            <  2:963911‑M2/149‑11 (MQ=255)
             tttatttGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaa                                                                                                                                      >  2:144503‑M2/1‑133 (MQ=255)
             tttatttGTCGGATAAGCCTTTGCCAGTTCCGGGATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaag                                                                                                                                     >  1:1437678‑M2/1‑132 (MQ=255)
              ttaattGTCGGATAAGACTTTGCCAGATCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGACACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaag                                                                                                                                     >  2:1084683‑M2/1‑132 (MQ=255)
                    gTCGGATAAGCCTTTGCCAGTTCCGTGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGACCCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttc                                                                                                                               <  1:468326‑M2/149‑24 (MQ=255)
                    gTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttc                                                                                                                               >  1:963911‑M2/1‑126 (MQ=255)
                    gTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttc                                                                                                                               >  2:1286057‑M2/1‑126 (MQ=255)
                        gATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgaga                                                                                                                           <  2:139770‑M2/149‑28 (MQ=255)
                             gCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGCGccttctcccaaaccaaggttttcgagagccgt                                                                                                                      <  2:953352‑M2/149‑33 (MQ=255)
                                  tGCCAGTTCCCTGTATTCTTCAGCAGAAAAACAGGCACCATTGCAATTCAGCCTCCCTGTTGCCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgca                                                                                                                 >  2:888728‑M2/1‑112 (MQ=255)
                                     cAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAAc                                                                                                              <  1:327510/149‑1 (MQ=255)
                                      aGTTCCGGGTAATCTTCAGCAGAAAAAGCGGCACCATTGGATTTCAGCCAGCCTGTTGGCGGAGGGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagt                                                                                                             >  2:364630‑M2/1‑108 (MQ=255)
                                        ttCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGAGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgc                                                                                                           >  2:666409‑M2/1‑106 (MQ=255)
                                          ccGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACCCCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgcca                                                                                                         <  2:1381974‑M2/149‑46 (MQ=255)
                                          ccGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgcca                                                                                                         <  1:664112‑M2/149‑46 (MQ=255)
                                            gggTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatc                                                                                                       <  1:561748‑M2/149‑48 (MQ=255)
                                            gggTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccagc                                                                                                       <  1:331652‑M2/149‑48 (MQ=255)
                                            gggTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagacgtttgcacagtgccatc                                                                                                       <  1:723938‑M2/149‑48 (MQ=255)
                                             ggTATTATTCAGCATAAAAAGCGGCACCATTGCATTTCAGCCAGACTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAt                                                                                                      <  2:1342046/149‑1 (MQ=255)
                                                aTTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatcagaa                                                                                                   <  2:1529217‑M2/149‑52 (MQ=255)
                                                   cttcAGCAGAAAAAGCGGCACCATTGCATTTCCGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACCCCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACACGCAAATGGcatc                                                                                                >  1:1180765/1‑149 (MQ=255)
                                                    ttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGCGccttctcccaaccaaggttttcgagagccgtttgcacagtgccatccgatttgat                                                                                               <  2:667647‑M2/149‑56 (MQ=255)
                                                          agAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgc                                                                                         >  1:606279‑M2/1‑88 (MQ=255)
                                                            aaaaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgcca                                                                                       <  1:1297709‑M2/149‑64 (MQ=255)
                                                               aaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACAAACAGGTAATGCAGAGACTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCttta                                                                                    >  1:571031/1‑148 (MQ=255)
                                                                 gCGGCACCATTGCATTTCAGCCTGCCTGTTGGCGGAGTGGCTGAAGGCCACGGTACCGGGACACCATCAGGTAATGCAGAGCCTTCTCCCAACCCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTAc                                                                                  <  1:1308225/149‑1 (MQ=255)
                                                                  cGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacgga                                                                                 >  2:138788‑M2/1‑80 (MQ=255)
                                                                     cACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattc                                                                              >  1:8306‑M2/1‑77 (MQ=255)
                                                                     cACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattc                                                                              >  1:1523239‑M2/1‑77 (MQ=255)
                                                                     aacCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGTAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattc                                                                              >  1:1413702‑M2/2‑77 (MQ=255)
                                                                        cATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttgtcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttg                                                                           <  1:374844‑M2/149‑76 (MQ=255)
                                                                         aTTGCAGTTCCGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaagggtttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgc                                                                          >  1:444476‑M2/1‑73 (MQ=255)
                                                                                ttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                                                   <  1:363970/149‑1 (MQ=255)
                                                                                 tCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaac                                                                  <  1:586185‑M2/149‑85 (MQ=255)
                                                                                   agccaaccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacag                                                                <  2:1117608‑M2/149‑87 (MQ=255)
                                                                                    gccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTGAACATGcg                                                               >  1:1386815/1‑148 (MQ=255)
                                                                                     ccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagca                                                              >  1:537860‑M2/1‑61 (MQ=255)
                                                                                         ccTGTTGGCGGAGTGGCTGAAGGCCACGTAACCGGGACACCAACATGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgc                                                          >  1:315034‑M2/1‑57 (MQ=255)
                                                                                           tGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgc                                                        >  1:475680‑M2/1‑55 (MQ=255)
                                                                                              tGGCGGAGTGTCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaa                                                     >  1:1071248‑M2/1‑52 (MQ=255)
                                                                                                   gAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggctaaacagcagcgcgcgaagtgcg                                                >  1:294731‑M2/1‑47 (MQ=255)
                                                                                                    tgtGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcatagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcgg                                               >  2:178719‑M2/2‑46 (MQ=255)
                                                                                                    aGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcgg                                               >  1:139770‑M2/1‑46 (MQ=255)
                                                                                                     gTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggt                                              >  2:1540386‑M2/1‑45 (MQ=255)
                                                                                                       ggCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaa                                            >  1:1117608‑M2/1‑43 (MQ=255)
                                                                                                        gCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcgcaaacaaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgcaaaacgtattcttgcggcttaacagcagcgcgcgaagtgcggtaat                                           <  1:1234487‑M2/149‑108 (MQ=255)
                                                                                                        gCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaag                                           <  2:549514‑M2/149‑108 (MQ=255)
                                                                                                        gCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaag                                           >  2:910084‑M2/1‑42 (MQ=255)
                                                                                                        gCGGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaag                                           >  2:730962‑M2/1‑42 (MQ=255)
                                                                                                         cTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagt                                          <  1:12519‑M2/149‑109 (MQ=255)
                                                                                                          tGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgagttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagta                                         <  1:541899‑M2/149‑110 (MQ=255)
                                                                                                          tGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggtgttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgctgtaagta                                         <  1:59964‑M2/149‑110 (MQ=255)
                                                                                                              ggCCACGGAACCGGGACACCACCAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactg                                     >  1:1003855‑M2/1‑36 (MQ=255)
                                                                                                               gCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttagagagccgttagcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgccaagtgcggtaattaactgg                                    <  2:71519‑M2/149‑115 (MQ=255)
                                                                                                                 cACGGAACCGGGACACCCACAGGTAATGCAGAGccttctcccaatccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtc                                  <  1:1285435‑M2/149‑117 (MQ=255)
                                                                                                                 cACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaacccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtcaggaactggtc                                  <  1:1317407‑M2/149‑117 (MQ=255)
                                                                                                                 cACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtc                                  <  2:1374526‑M2/149‑117 (MQ=255)
                                                                                                                  aCGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgaacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactgttcg                                 <  2:385918‑M2/149‑118 (MQ=255)
                                                                                                                  aCGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgattgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcg                                 <  2:911069‑M2/149‑118 (MQ=255)
                                                                                                                      aaCCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtg                               >  2:219314‑M2/1‑28 (MQ=255)
                                                                                                                      aaCCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtg                               <  1:219314‑M2/147‑120 (MQ=255)
                                                                                                                                 cAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagccgcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctcc                  <  1:519653‑M2/149‑133 (MQ=255)
                                                                                                                                 cAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctcc                  <  2:575272‑M2/149‑133 (MQ=255)
                                                                                                                                 cAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgcccc                        >  1:851940‑M2/1‑17 (MQ=255)
                                                                                                                                 cAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgcccc                        <  2:851940‑M2/143‑127 (MQ=255)
                                                                                                                                 cAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCt                  >  1:806172/1‑149 (MQ=255)
                                                                                                                                  aaCAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctcca                 <  2:862700‑M2/149‑134 (MQ=255)
                                                                                                                                   aCAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgcctaacggattcttgcggctgatcagccgcgcgcgaagtgcggtaagtacctggtcgtgccgccccttctccag                <  1:392994‑M2/149‑135 (MQ=255)
                                                                                                                                      ggTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacggtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggct             <  2:477592‑M2/149‑138 (MQ=255)
                                                                                                                                       gTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTATTACCAGGGGGATTTATCATGCTTATTGGCGATGTACGAGTATCAGCAAAGGACCAGAACACAGATCTACaagg            >  2:677447/1‑147 (MQ=255)
                                                                                                                                        tAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctgg           >  2:427611‑M2/1‑10 (MQ=255)
                                                                                                                                            gCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatttcgccaaacggattcttgcggcttaacagcagcgcgcgcagtgcggtaagtaactggtcgtgccgccccttctccaggctggcacc       <  2:351729‑M2/149‑144 (MQ=255)
                                                                                                                                            gCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcacc       <  1:130108‑M2/149‑144 (MQ=255)
                                                                                                                                              agagccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctcccggctggcaccgg     <  2:387982‑M2/149‑146 (MQ=255)
                                                                                                                                               gcgCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAATATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATgcgc    <  1:969190/147‑1 (MQ=255)
                                                                                                                                                 gccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatg  <  1:1488834‑M2/149‑149 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
GTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTG  >  NC_000913_3_hsa_pgi/1209457‑1209750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.