| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_pgi | = 1028822 | 114 (1.130) | 13 (0.130) | 11/286 | 8.5 | 10.7% | coding (1148/1191 nt) | rlmI | 23S rRNA m(5)C1962 methyltransferase, SAM‑dependent |
| ? | NC_000913_3_hsa_pgi | = 1028857 | 108 (1.110) | coding (1113/1191 nt) | rlmI | 23S rRNA m(5)C1962 methyltransferase, SAM‑dependent | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TAACAGGGAATGGCGGACCTGCTGGCCGATACCGAATTTGCTGGCAATCATAGTCACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATAGCCCTTCC‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_hsa_pgi/1028671‑1028822‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcc‑gTCAGGCAGCCGATCATCCGGTGATCGCTACCTATCCGGAAGGGCTATATCTGAAAGGGTTTGCCTGTCGCGTCATGTAACTTGAAATGTGGAATTTTACCCTTATATCAAAGGTAAAGATTTCCCGGGAGGTGACTATGATTGCCAGC < NC_000913_3_hsa_pgi/1028857‑1028710 TAACAGGGAATGGCGGACCTGCTGGCCGATACCGAATTTGCTGGCAATCATAGTCACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATAGCCCTT > 2:1164147/1‑149TAACAGGGAATGGCGGACCTGCTGGCCGATACCGAATTTGCTGGCAATCAAAGTCACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGTAAACCCTTTCAGATATAGCCCTT > 1:891396/1‑149 AACAGGGAATGGCGGACCTGCTGGCCGATACCGAATTTGCTGGCAATCATAGTCACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATAGCCCTTC < 1:28761/149‑1 GGGAATGGCGGACCTGCTGGCCGATACCGAATTTGCTGGCAATCATAGTCACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATTGCCCTTCC‑GTt > 1:346112/1‑148 CGGACCTGCTGGCCGATACCGAATTTGCTGGCAATCATAGTCACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATAGCCCTTCC‑GTCAGGCAGCC > 1:1395075/1‑149 AATTTGCTGGCAATCATAGTCACCTCCCGGGAAATCTTTTCCTTTGATATAAGGGTAAAAATCCACATATCAAGTTACATGACGAGACAGGCAAACCCTTTCAGATGTAGCCCTTCCGGTTAGGCAGCCTATCATCCGGTGATCGCTAC < 2:150530/149‑1 TGCTGGCAATCATAGTCACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATAGCCCATCC‑GTCAGGCAGCCGATCATCCGGTGATCGCTACCTATC < 2:113603/149‑1 TGCAGGCAATCATAGTCACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATAGCCCTTCCGGATAGGCAGCCGATCATCCGGTGATCGCTACCTAT < 2:1287525/149‑1 GCTGTCAATCATAGTCACCTCCCGGGAAATCTTTACCTTTCATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCATATATAGACCTTCC‑GTCAGGCAGCCGATCATCCGGTTATCGCTACCTATCC < 2:927177/149‑1 GCTGGCAATCATAGTCACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATAGCCCTTCCGGATAGGCAGCCGATCATCCGGTGATCGCTACCTATC < 2:841055/149‑1 GGCAATCATAGTCACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATAGCCCTTCC‑GTCAGGCAGCCGATCATCCGGTGATCGCTACCTATCCGGA < 1:8576/149‑1 GGCAATCATAGTCACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATAGCCCTTCC‑GTCAGGCAGCCGATCATCCGGTGATCGCTACCTATCCGGA < 2:1395075/149‑1 AATCATAGTCACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATAGCCCTTCC‑GTCAGGCAGCCGATCATCCGGTGATCGCTACCTATCCGGAAGG < 1:655626/149‑1 ATCATAGTCACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATAGCCCTTCC‑GTCAGGCAGCCGATCATCCGGTGATCGCTACCTATCCGGAAGGG < 1:1199449/149‑1 ACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATAGCCCTTCC‑GTCAGGCAGCCGATCATCCGGTGATCGCTACCT < 1:768383/129‑1 ACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATAGCCCTTCC‑GTCAGGCAGCCGATCATCCGGTGATCGCTACCT > 2:768383/1‑129 TTCC‑GTCAGGCAGCCGATCATCCGGTGATCGCTACCTATCCGGAAGGGCTATATCTGAAAGGGTTTGCCTGTCGCGTCATGTAACTTGAAATGTGGAATTTTACCCTTATATCAAAGGTAAAGATTTCCCGGGAGGTGACTATGATTGC < 1:36481/149‑1 CC‑GTCAGGCAGCCGATCATCCGGTGATCGCTACCTATCCGGAAGGGCTATATCTGAAAGGGTTTGCCTGTCGCGTCATGTAACTTGAAATGTGGAATTTTACCCTTATATCAAAGGTAAAGATTTCCCGGGAGGTGACTATGATTGCCA < 1:486955/149‑1 CC‑GTCAGGCAGCCGATCATCCGGTGATCGCTACCTATCCGGAAGGGCTATATCTGAAAGGGTTTGCCTGTCGCGTCATGTAACTTGAAATGTGGAATTTTACCCTTATATCAAAGGTAAAGATTTCCCGGGAGGTGACTATGATTGCCA < 2:480054/149‑1 GTCAGGCAGCCGATCATCCGGTGATCGCTACCTATCCGGAAGGGCTATATCTGAAAGGGTTTGCCTGTCGCGTCATGTACCTTGAAATGTGGAATTTTACCCTTATATCAAAGGTAAAGATTTCCCGGGAGGTGACTATGATTGCCAGC > 1:1196002/1‑149 GTCAGGCAGCCGATCATCCGGTGATCGCTACCTATCCGGAAGGGCTATATCTGAAAGGGTTTGCCTGTCGCGTCATGTAACTTGAAATGTGGAATTTTACACTTATATCAAAGGTAAAGATTTCCCGGGAGGTGACTATGATTGCAAGC > 1:402544/1‑149 TAACAGGGAATGGCGGACCTGCTGGCCGATACCGAATTTGCTGGCAATCATAGTCACCTCCCGGGAAATCTTTACCTTTGATATAAGGGTAAAATTCCACATTTCAAGTTACATGACGCGACAGGCAAACCCTTTCAGATATAGCCCTTCC‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_hsa_pgi/1028671‑1028822‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcc‑gTCAGGCAGCCGATCATCCGGTGATCGCTACCTATCCGGAAGGGCTATATCTGAAAGGGTTTGCCTGTCGCGTCATGTAACTTGAAATGTGGAATTTTACCCTTATATCAAAGGTAAAGATTTCCCGGGAGGTGACTATGATTGCCAGC < NC_000913_3_hsa_pgi/1028857‑1028710 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |