New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi = 291401NA (NA)32 (0.320) 26/296 4.5 33.3% intergenic (‑55/‑3) insA/yagJ IS1 repressor TnpA/CP4‑6 prophage; uncharacterized protein;Phage or Prophage Related
?NC_000913_3_hsa_pgi 314984 = 64 (0.630)pseudogene (628/872 nt) eaeH pseudogene, attaching and effacing protein homology;factor; Not classified
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 101 total aligned reads displayed.

TAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCA  >  NC_000913_3_hsa_pgi/291258‑291549
                                                                                                                                               |                                                                                                                                                    
tAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAtt                                                                                                                                                 >  1:768436/1‑149 (MQ=32)
   cgcTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTc                                                                                                                                              <  2:213330/149‑1 (MQ=34)
     cTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAg                                                                                                                                            <  2:953706/149‑1 (MQ=35)
           tCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGa                                                                                                                                      <  2:953025/149‑1 (MQ=40)
           tCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGa                                                                                                                                      >  1:1211779/1‑149 (MQ=40)
           tCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGa                                                                                                                                      >  1:1592645/1‑149 (MQ=40)
              ggCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACAACATCATACACTAATTCAGTAAGTTGGCAGCATCACCGAATTTTCAGCACGGTTGt                                                                                                                                   >  2:1470800/1‑149 (MQ=255)
               gCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGtt                                                                                                                                  >  2:300133/1‑149 (MQ=255)
                cAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGttt                                                                                                                                 <  1:646661/149‑1 (MQ=255)
                cAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGttt                                                                                                                                 >  2:88849/1‑149 (MQ=255)
                  gTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCa                                                                                                                               <  2:203864/149‑1 (MQ=255)
                   tGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGCCAGCTGATAGAAACAGCAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCATCCCGGATGTTTCAc                                                                                                                              >  1:128055/1‑149 (MQ=255)
                   tGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCAc                                                                                                                              >  1:677082/1‑149 (MQ=255)
                    gCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACg                                                                                                                             >  1:67454/1‑149 (MQ=255)
                    gCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACg                                                                                                                             <  2:501340/149‑1 (MQ=255)
                     cTTTTGCCGTTACGCACCACCCCGTCATTAGCTGAACATGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAATTTTCAGCCCGGATGTTTCACGt                                                                                                                            <  1:410713/149‑1 (MQ=255)
                     cTTTTGCCGTTACGCACCACACCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCATCCCGGATGTTTccctt                                                                                                                            >  2:870761/1‑145 (MQ=255)
                      ttttGCCGTAACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTa                                                                                                                           <  2:632978/149‑1 (MQ=255)
                       tttGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTAc                                                                                                                          <  1:1297296/149‑1 (MQ=255)
                                aCGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGa                                                                                                                 >  1:808663/1‑149 (MQ=255)
                                 cGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGaa                                                                                                                <  2:1546977/149‑1 (MQ=255)
                                  gCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAat                                                                                                               >  2:1351622/1‑149 (MQ=255)
                                    accaccCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAatat                                                                                                             >  2:639556/1‑149 (MQ=255)
                                    accaccCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGGAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAatat                                                                                                             >  2:1233511/1‑149 (MQ=255)
                                      caccGCGTCAGTAGCTGAATAGGAGTGACATCTGAAAGAAACCGCAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCt                                                                                                           <  2:1070322/149‑1 (MQ=18)
                                         cccGTCAGTAGCTGAACAGGAGGTACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGACCGGATGTTTCACGTACCTATGTCGAATATCTGGc                                                                                                        <  2:795609/149‑1 (MQ=255)
                                             tCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCGATGTCGAATATCTGGCCGaa                                                                                                    >  1:1545849/1‑148 (MQ=255)
                                                   gCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGtt                                                                                              <  2:627403/149‑1 (MQ=255)
                                                    cTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTTACTCATTAAGTTGGCAGCATCACCGAATTTTCAGCACGGATGTTTCCCGTACCTATGTCGAATTTCTGGCCGATAAGGTTg                                                                                             >  1:1070721/1‑149 (MQ=21)
                                                    cTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTCCCTATGTCGAATATCTGGCCGATAAGGTTg                                                                                             >  2:432595/1‑149 (MQ=255)
                                                      gAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCAGCATACACTAAATCAGTAAGTTGGCAGCATGACCGTAGTTTCAGCCCGGAGGTTTCACGTACCAATGTCGAATATCTGGCAGATAAGTTTgag                                                                                           >  2:1398912/1‑147 (MQ=18)
                                                           ggaggGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAACCACCATCAGACACTAAATCAGTAAGCTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGATTATCTGGCCGATAAGGTTGCGGATCg                                                                                      >  2:867283/1‑149 (MQ=255)
                                                           ggaggGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCAGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCg                                                                                      >  2:1158053/1‑149 (MQ=255)
                                                            gaggGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCga                                                                                     >  1:90133/1‑149 (MQ=255)
                                                              gggACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCgaga                                                                                   >  1:190699/1‑149 (MQ=255)
                                                               ggACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGagaa                                                                                  <  2:853805/149‑1 (MQ=255)
                                                                 aCAGCTGATAGAAACAGAAGCCCCTGGAGCACCTCCAAAACACCATCATACACTAAATCAGTAAGTGGGCAGCATCACCGAATTTACAGACCGGCTGTTTCACTGCCCTATGACGCATAAGTTGCAGATAAGGTTGCGGATCGagaagc                                                                                >  1:974949/1‑148 (MQ=17)
                                                                   aGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGACTTTTCCGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAgg                                                                              <  2:107407/149‑1 (MQ=255)
                                                                   aGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAgg                                                                              >  2:1198682/1‑149 (MQ=255)
                                                                    gatgttAGAAACAGAAGCAACTGGAGCAACTAAACACCAACATCATACACTAACTCAGTAAGTTGGCAGCTGCACCGAATTTTCAGCCCGGATGGTTCACGTACCTATGTCTAATCTCTGGCCGATAAGGTTGCGGATCGAGAAGAGGa                                                                             <  1:894368/144‑1 (MQ=255)
                                                                    gCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGa                                                                             <  1:1577409/149‑1 (MQ=255)
                                                                    gCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGa                                                                             <  1:88849/149‑1 (MQ=255)
                                                                      tGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCTTCATAGACTAATTCAGTAAGTTGGCAGCATCCCCGAATTTTCAGCCCGGATGTTTCCCGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATg                                                                           >  1:1216667/1‑149 (MQ=37)
                                                                       gATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGGCGATAAGGTTGCGGATCGAGAAGAGGATGc                                                                          >  2:330122/1‑149 (MQ=255)
                                                                       gATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGc                                                                          >  2:328438/1‑149 (MQ=255)
                                                                        aTAGAAACAGAAGCCACTGGAGCCCCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATATTCAGCCCGGATGTTTCACGTTCCTATGTCGAATATCTGGCCGATAAGTTTGCGGATCGACAAGAGGATTCa                                                                         >  2:1203884/1‑149 (MQ=25)
                                                                          tgAAACAGAAGCAATTGGATCATTTCAAAAACACGATCTTACAATAAATAAGTAAGTTGTCAGCTTCACCGAATTTTCAGCACGGATGTTTCAAGTACCTATGTGGAATATCTGGCCGATAAGGTTGCGGAGCGAGAAGAGGATGTaga                                                                       <  2:1554352/148‑1 (MQ=255)
                                                                          aGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCaga                                                                       >  1:154084/1‑149 (MQ=255)
                                                                            aaaCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAgg                                                                     <  1:176134/149‑1 (MQ=255)
                                                                             aaCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGa                                                                    <  1:300133/149‑1 (MQ=255)
                                                                              aCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGaa                                                                   >  1:1525783/1‑149 (MQ=255)
                                                                                  aaGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCTAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATTCAGAGGAATATc                                                               <  2:768436/149‑1 (MQ=255)
                                                                                       aCTGGAGCACCTCAAAAACACCATCATACACTACATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGAGCGAGAAGAGGATGCAGAGGAATATCTGGaa                                                          <  2:1321368/149‑1 (MQ=255)
                                                                                       aCTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGaa                                                          >  1:765978/1‑149 (MQ=255)
                                                                                       aCTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGAGCGAGAAGAGGATGCAGAGGAATATCTGGaa                                                          <  1:639556/149‑1 (MQ=255)
                                                                                          ggAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCa                                                       <  2:1592645/149‑1 (MQ=255)
                                                                                             gCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATc                                                    <  1:1023344/149‑1 (MQ=255)
                                                                                              cACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCa                                                   >  2:1310921/1‑149 (MQ=255)
                                                                                               aCCTCAAAAACACCATCATACACTAAATCAGTAAGGTGGCAGCATCCCCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGGTGCGGATCGAGAAGAGGATGCAGAGGATTATCTGGCAGCAATCAt                                                  >  2:356280/1‑149 (MQ=38)
                                                                                                 cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATg                                                 <  2:220834/148‑1 (MQ=255)
                                                                                                 cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATg                                                 >  1:220834/1‑148 (MQ=255)
                                                                                                  tCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGc                                                                                            <  2:33526/104‑1 (MQ=255)
                                                                                                  tCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGa                                               >  1:51773/1‑149 (MQ=255)
                                                                                                  tCAAAAACACCATCATACACTAAATCAGTAAGATGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGc                                                                                            >  1:33526/1‑104 (MQ=255)
                                                                                                  tCAAAAACACCATCATACACAAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTCCCAATGTCGAATATCTCGCCGATAAGGGAGCGGATAGAGAAGAGGATGCAGAGGAATTTCTGAAAGCAATCATgca                                               >  2:1430738/1‑147 (MQ=37)
                                                                                                   cAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAg                                              >  2:1300111/1‑149 (MQ=255)
                                                                                                    aaaaaCACCATCATACACTAAATCAGTAAGTTGGCTGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGACGAGAAGGTTGCGGCGCGAGAAGAGGATGCAGAGGAATATCTGGATGCAATCATGGCgg                                             >  2:1078699/1‑149 (MQ=38)
                                                                                                    aaaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAgg                                             >  1:277768/1‑149 (MQ=255)
                                                                                                    aaaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTAGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCATAGTAATATCTGGAAGCAATCATGGatg                                             >  1:1438917/1‑147 (MQ=255)
                                                                                                       aaCACCATCATACACTACAGCAGTATGTTGGCAGCATCTCCGAATTTTCAGCCCGGATGTTTCCCGTACCTATGTCGAATATCTGGGAGAGAAGGTGGCGGATCGAGAAGAGGTTGCAGAGGAATATAGGGAAGCACTCACGGAGGGTc                                          >  2:1078898/1‑149 (MQ=255)
                                                                                                       aaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTc                                          >  1:672662/1‑149 (MQ=255)
                                                                                                        acacCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCg                                         >  1:701367/1‑149 (MQ=255)
                                                                                                         cacCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCgt                                        <  2:808663/149‑1 (MQ=255)
                                                                                                            catcatACACTAAATCAGTAAGTTGGCAGCATCACCGATTTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGTTCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGtt                                     >  2:1520653/1‑149 (MQ=255)
                                                                                                            catcatACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGtt                                     >  2:798549/1‑149 (MQ=255)
                                                                                                             atcatACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTa                                    <  2:677082/149‑1 (MQ=255)
                                                                                                              tcatACACTAAATCAGTAAGTTGGCAGCATCACCGAATTATCAGCCCGGATGTTTCACGTACCTCTGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTAc                                   <  2:289622/149‑1 (MQ=255)
                                                                                                                atACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCg                                 <  1:328438/149‑1 (MQ=255)
                                                                                                                 tACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGAGGTTTCACGTACCTAGGGCGAATTTCTGGGCGATAATGTTGCGGATCGCGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGt                                >  2:1208438/1‑149 (MQ=255)
                                                                                                                     cTAAATCAGTAAGTTGGCAGCATCACAGAATTTTCATCCCGGATGTTTCCAGTACCTATTTCGAATATCTGGCCGATAAGGTTGCTGATCGAGAAGAGGATGCAGAGGAAAATCTGGAAGCAATCATGGAGGCTAGTGTTACCGTTGCt                            >  2:1296722/1‑149 (MQ=255)
                                                                                                                      tAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCCCGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCCTTGcgg                           >  2:933872/1‑147 (MQ=255)
                                                                                                                      tAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTg                           >  2:43020/1‑149 (MQ=255)
                                                                                                                      tAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAAGATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTg                           >  2:1262888/1‑149 (MQ=255)
                                                                                                                       acaTCAGTCAGCTCCCAGCATAAACGAAATTTCACCCTGCTTTTTTCACGTACATATGTCGAATATCTGGCCGCTAAGGTTGCGCATCGAGAAGAGGATGCAGAGGAATATCTGGCAGCACTCATGGAGGCTCGTGTTACCGTTGCTgg                          <  2:1119412/147‑1 (MQ=255)
                                                                                                                         aTCAGTAAGTTGGCAGCATCACCGATTTTTCAGCCCGTATGTTTCACGTACCTATGTCTAATATCTGGCCGATATGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCTTGGAGGCTCGTGTTACCGTTGCTGGCa                        <  1:1398912/149‑1 (MQ=255)
                                                                                                                             gTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCCCGTACCTATGTCGAATATCGGGCCGATAAGGTTGCGGATCGAGATGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCGCGTGTTACCGTTGCTGGCATggg                    >  2:1407206/1‑149 (MQ=255)
                                                                                                                             gTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCTGAGGATTATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATggg                    >  2:1595962/1‑149 (MQ=255)
                                                                                                                             gTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATggg                    >  1:1501703/1‑149 (MQ=255)
                                                                                                                                 ggtGGCAGCATCACCGAATTTTCAGCCCGGATGTGTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCTAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTg                <  2:128055/147‑1 (MQ=255)
                                                                                                                                 gTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTg                >  1:372171/1‑149 (MQ=255)
                                                                                                                                     gcagcaTCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGa            <  2:51773/149‑1 (MQ=255)
                                                                                                                                      catcaTCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGAt           <  1:1470800/146‑1 (MQ=255)
                                                                                                                                      cagcaTCACCGAATTTTCAGCCCGGATGGTTCACGTACCTATGTCGAATCTCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGAt           <  2:1211779/149‑1 (MQ=255)
                                                                                                                                       agcaTCACCGAATTATCAGCCCGGATGTTTCACGTACCTATGTCTAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCACTCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATg          <  1:870761/149‑1 (MQ=255)
                                                                                                                                          aTCCCCGAATTTTCATCCCCGCTGTTTCACGTACGTATGGAGAATTTCTTGCCGATATGGGTTCGTATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCACTCATGGAGGCTCGTGTTACCGTTGCTGCCATGTGGCTGGTGATGGAg       <  2:1070721/149‑1 (MQ=255)
                                                                                                                                          aTCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAg       <  2:154084/149‑1 (MQ=255)
                                                                                                                                             aCCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTg    >  2:747701/1‑149 (MQ=255)
                                                                                                                                              ccGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAAGCATGGAGGCTCGTGTGACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGc   >  2:285863/1‑149 (MQ=255)
                                                                                                                                               cGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCGGAGGAATATCTGGAAGAAATCATGGAGGCTCGAGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCa  >  1:1105403/1‑149 (MQ=255)
                                                                                                                                               cGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCa  >  2:1378628/1‑149 (MQ=255)
                                                                                                                                               |                                                                                                                                                    
TAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCA  >  NC_000913_3_hsa_pgi/291258‑291549

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.