| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_pgi | = 258674 | NA (NA) | 95 (0.950) | 72/294 | 0.3 | 95.0% | intergenic (+775/‑2) | crl/crl | pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers |
| ? | NC_000913_3_hsa_pgi | 319809 = | 5 (0.050) | coding (193/1326 nt) | rclA | reactive chlorine stress species (RCS) resistance protein; pyridine nucleotide‑dependent disulfide oxidoreductase family | |||||
Only 100 of 188 total aligned reads displayed.
CCTCAGGCCGATGAACACGCAGGCTATGATTATTGATAAACTCCGCCTGGCCGTCGATCACGTCGATATTGGGCATATCCGCAAGATTATGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTTTGCCAGCGTGACGGCTAATGTTTTT > NC_000913_3_hsa_pgi/319662‑319957 | gagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCa < 1:1063483‑M2/2‑1 (MQ=255)gagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCa > 2:835461‑M2/148‑149 (MQ=255)ccTCAGGCCGATGAACACGCAGGCTATGATTATTGATAAACTCCGCCTGGCCGTCGATCACGTCGATATTGGGCATATCCGCAAGATTATGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACa > 2:266619/1‑149 (MQ=255) tCAGGCCGATGAACACGCAGGCTATGATTATTGATAAACTCCGCCTGGCCGTCGATCACGTCGATATTGGGCATATCCGCAAGATTATGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACaaa > 1:1295113/1‑149 (MQ=255) atagcgctgatgtccggcggtgcttttgcagttacgcaccaccacgtcagtagctgaacaggagggacagacgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCaaaa > 1:604861‑M2/145‑149 (MQ=255) tagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaactggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagttagttggcagcatcacCAAGAt > 1:1361180‑M2/144‑149 (MQ=255) agcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATc > 1:676684‑M2/143‑149 (MQ=255) gCCGATGAACACGCAGGCTATGATTATTGATAAACTCCGCCTGGCCGTCGATCACGTCGATATTGGGCATATCCGCAAGATTATGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCt < 1:555283/149‑1 (MQ=255) gCCGATGAACACGCAGGCTATGATTATTGATAAACTCCGCCTGGCCGTCGATCACGTCGATATTGGGCATATCCGCAAGATTATGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCt < 1:602351/149‑1 (MQ=255) cGATGAACACGCAGGCTATGATTATTGATAAACTCCGCCTGGCCGTCGATCACGTCGATATTGGGCATATCCGCAAGATTATGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGg > 2:44827‑M2/1‑148 (MQ=255) gtccggcggtgcttttgccgttacgcaccaccccgttagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGtgctg > 1:833960‑M2/134‑149 (MQ=255) gtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTCTctgctg > 2:283825‑M2/134‑149 (MQ=255) acacGCAGGCTATGATTATTGATAAACTCCGCCTGGCCGTCGATCACGTCGATATTGGGCATATCCGCAAGATTATGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatg < 1:1586033‑M2/149‑8 (MQ=255) cacGCAGGCTATGATTATTGATAAACTCCGCCTGGCCGTCGATCACGGCGATATTGGGCATATCCGCAAGATTATGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatga > 1:1271023‑M2/1‑141 (MQ=255) cggcggtgcttttgccgttacgcacaaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGtgtgctgcgg > 1:780612‑M2/131‑147 (MQ=255) gCAGGCTATGATTATTGATAAACTCCGCCTGGCCGTCGATCACGTCGATATTGGGCATATCCGCAAGATTATGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactc > 2:992979‑M2/1‑138 (MQ=255) ggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCg > 1:1002594‑M2/127‑149 (MQ=255) ggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaacccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCg > 1:1596355‑M2/127‑149 (MQ=255) gtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagatgatagaaacagcagccactggagcacctcaaaaccaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTTTGCGt > 2:745272‑M2/126‑149 (MQ=255) gCTATGATTATTGATAAACTCCGCCTGGCCGTCGATCACGGCGATATTGGGCATATCCGCAAGATAATGAAAATTCTTATTACGTAAAAACTAAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaac > 1:883874‑M2/1‑134 (MQ=255) cttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagacacagcagccactggagcacctcaaaaccaccatcatacactaaatcagtaagtttgcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCAt > 2:554065‑M2/123‑149 (MQ=255) ttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATg < 2:767645‑M2/28‑1 (MQ=255) gATTATTGATAAACTCCGCCTGGCCGTCGATCACGTCGATATTGGGCATATCCGCAAGATTATGAAAATTCTTATTACGTAAAAAATTAACAACTTCATTTTTACGATGTATGTCACGGACAAAATCTGggtaatgactccaacttaat < 2:1029567‑M2/149‑21 (MQ=255) ttattGATAAACTCCGCCTGGCCGTCGATCACGTCGATATTGGGCATATCCGCAAGATTATGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaacttattga < 1:6147‑M2/149‑23 (MQ=255) ttattGATAAACTCCGCCTGGCCGTCGATCACGTCGATATTGGGCATATCCGCAAGATTATGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaacttattga > 1:591837‑M2/1‑127 (MQ=255) tgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAAc < 2:669620‑M2/31‑1 (MQ=255) tGATAAACTCCGCCTGGCCGTCGATCACGTCGATATTGGGCATATCCGCAAGATTATGAAAATTCTTATTACGTAAAAAATTACCCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaacttattgatagt < 1:1278810‑M2/149‑27 (MQ=255) gttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAAt < 1:1130016‑M2/35‑1 (MQ=255) gATAAACTCCGCCTGGCCGTCGATCACGTCGATATTGGGCATATCCGCAAGATTATGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaacttattgatagtg < 2:1640754‑M2/149‑28 (MQ=255) aTAAACTCCGCCTGGCCGTCGATCACGTCGATATTGGGCATATCCGCAAGATTATGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaacttattgatagtgt < 2:744157‑M2/149‑29 (MQ=255) caccaccccgtcagtagctgaacaggagggacagctgatagtaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTttg < 2:605685‑M2/41‑1 (MQ=255) tCCGCCTGGCCGTCGATCACGTCGATATTGGGCATATCCGCAAGATTATGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaacttagtgatagtgtttgatg < 2:1068955‑M2/149‑35 (MQ=255) cccccgtcagtagctgaacagtagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGAGCTGCTGTGCGTCATGAACCAATGTTttggttg < 2:1596355‑M2/45‑1 (MQ=255) accccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTttggttg < 1:280261‑M2/45‑1 (MQ=255) accccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTttggttg < 2:1002594‑M2/45‑1 (MQ=255) ggCCGTCGATCACGTCGATATTGGGCATATCCGCAAGATTATGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATATGggtaatgactccaacttattgatagtgttttatgttcagat < 2:581407‑M2/149‑42 (MQ=255) ccGTCGATCACGTCGATATTGGGCATATCCGCAAGATTATGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactcgaacttattgatagtgttttattttcagataa < 1:1075529‑M2/149‑44 (MQ=255) aagtagctgaacaggagggacagctgatagaaacagaagccactgtagcacctcaaaaacaccatcatacactaaatcagtaagttgtcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCa < 2:636889‑M2/52‑1 (MQ=255) aTCACGTCGATATTGGGCATATCCGCAAGATTATGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccg < 1:1617737‑M2/149‑50 (MQ=255) tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGata > 2:1357133‑M2/91‑149 (MQ=255) gaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGATGTGCGTCATGAACCAATGGTTTGGTTGGGATGCAGCCGatat > 2:1339067‑M2/90‑149 (MQ=255) gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGACGATATTAATAc > 2:1150165‑M2/84‑149 (MQ=255) gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcaacacCAAAATCTGTGTTCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATAc > 2:782594‑M2/84‑149 (MQ=255) tatTGGGCATATCCTCAAGATTATGAAAATTCTTATTACGTAAAAAATTACCCTCTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt > 1:1574026‑M2/1‑90 (MQ=255) gcacagctgatagaaacagaagccactggagcacctcaaaaacacgatcaaacactaaatcagtaagttggcagcatcacCAAACTCTGTGTGCTGCTGTGCGTCATGAAGCAATGGTTTGGTTGGGAAGCAGCAGATATTAATGCAgg > 2:753965‑M2/81‑149 (MQ=255) ttGGGCATATCCGCAAGATTATGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca < 1:1353396‑M2/149‑62 (MQ=255) gacagctgatagaaacagaagccactggagcacctcaaaaacaccatcataccctaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAAAGTTTAGTTTGGGATGCAGCCGATATTAATACagga > 2:101583‑M2/80‑148 (MQ=255) gggCATATCCGCAAGATTATGAAAATTCTTATTACGTAAAAAATTAAACACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg > 1:1370186‑M2/1‑86 (MQ=255) cagctgatagaaacagaagccactggagcacctcacaaacaccatcatacacttaatcagtaagttggcagcagcacCAAAAGCTGTGTGCTGCTGTGCGTCATGACCCAATGTATTGGTAGGGATGCAGCCGATATTAATACAGGTcc > 1:925104‑M2/78‑149 (MQ=255) agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagctgcagCTAACTCTGTGTGCTGCTGTGCGTCATGAAGCAATGTTTTGGTTGGGATGCAGCCGATATTACTACAGGTgcc > 2:1392282‑M2/77‑149 (MQ=255) ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGc > 1:1609429‑M2/75‑149 (MQ=255) tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATCTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCAGcc > 2:648717‑M2/74‑149 (MQ=255) tatCCGCAAGATTATGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagct > 2:1601999‑M2/1‑81 (MQ=255) gataggaacagaagccactggagcacctcaaaaacaccatcctacacttaatcagtaagttggcagcatcaaCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATTCAGGTCCCGCCa > 1:184076‑M2/73‑149 (MQ=255) gCAAGATTATGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccacc < 1:1457226‑M2/149‑74 (MQ=255) aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATTCAt > 2:439754‑M2/68‑149 (MQ=255) cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGc > 2:1187117‑M2/65‑149 (MQ=255) tatTATGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaactttttgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatt > 1:936123‑M2/2‑72 (MQ=255) aTTATGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattt > 2:652766‑M2/1‑71 (MQ=255) agccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCAttt < 1:218857‑M2/89‑1 (MQ=255) gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTg > 1:276125‑M2/60‑149 (MQ=255) aTGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga > 2:1295113‑M2/1‑68 (MQ=255) aTGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga > 1:439909‑M2/1‑68 (MQ=255) gAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaacttaatgatagtgttttatgttcagataatgcccgatgactttgtcatgcggctccaccgattttgaga < 1:1541888‑M2/149‑84 (MQ=255) actggagcacctcaaaaacaccatcattcactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGAtt > 2:308377‑M2/57‑149 (MQ=255) aaaTTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaac > 1:744157‑M2/1‑64 (MQ=255) ggagcacctcaaaaacaccatcatacactaactcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGtt < 1:372645‑M2/96‑1 (MQ=255) gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTc < 2:281971‑M2/97‑1 (MQ=255) tCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaca > 1:1014922‑M2/1‑60 (MQ=255) cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATga > 1:568511‑M2/48‑149 (MQ=255) ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATgag > 1:237049‑M2/47‑149 (MQ=255) aCGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGgggaatgactccaacttattgatagttttttatgttcagataatgcccgatgacgttgtcatgcagctccaccgattttgagaacgacagcgactt > 1:653247‑M2/1‑53 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGc > 1:694447‑M2/44‑149 (MQ=255) gTAAAAAATTAACCACTTCATTTTTACGATGTATGGCACGGACAAAATCTGgggaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccacagattttgagaacgacagcgacttcc < 2:577437‑M2/149‑99 (MQ=255) tAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccg > 1:470965‑M2/1‑50 (MQ=255) tAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccg < 2:470965‑M2/124‑75 (MQ=255) caccatcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTc < 1:765289‑M2/111‑1 (MQ=255) atcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCa > 2:1088494‑M2/35‑149 (MQ=255) tcatacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCTGCCGATATTAATACAGGTCCCGCCATACATTCCATTTGATTGTTAGATGAGAGCCACTCGCCaa > 1:963240‑M2/34‑149 (MQ=255) aCCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaacttattgatcgtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgt > 2:1278810‑M2/1‑40 (MQ=255) tacactaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCt > 1:725951‑M2/31‑149 (MQ=255) ctaaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTTCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCtt > 1:1311995‑M2/27‑149 (MQ=255) taaatcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCttt > 1:1448408‑M2/26‑149 (MQ=255) tCATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccagg > 1:380712‑M2/1‑34 (MQ=255) cATTTTTACGCTGTATGGCACGGACAAAATCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggt < 1:619433‑M2/149‑117 (MQ=255) aatcaggaagttggcagcatcacCAAAATCTGTGTGCTGCTGGGCGTCAGGACCCAATGTTTGGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTTCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTTTg < 2:780612‑M2/126‑1 (MQ=255) atcagtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTTTGc > 1:176940‑M2/23‑149 (MQ=255) tttaACGCAGAATGGCACGGACAAAAGCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgaagacttggtcatgcagctccaccgagtttgagaacgacagcgacttccgtcccagccgtgccaggtgct > 2:327512‑M2/1‑30 (MQ=255) ttACGCTGTATGGCACGGACAAAATCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgc > 1:540603‑M2/1‑28 (MQ=255) gtaagttggcagcatcacCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTTTGCCAGc > 1:284419‑M2/19‑149 (MQ=255) gtaagttggcagcatcacCAAAATCTGTGTGCTGCTGAGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTTTGCCAGc > 1:1043773‑M2/19‑149 (MQ=255) gCTGTATGGCACGGACAAAATCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctca > 2:597561‑M2/1‑24 (MQ=255) cTGTATGGCACGGACAAAATCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcag > 2:1457226‑M2/1‑23 (MQ=255) gTATGGCACGGACAAAATCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagat > 1:2508‑M2/1‑21 (MQ=255) ggCACGGACAAAATGTGggtaatgactccaacttattgatagagttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcag > 1:1068955‑M2/1‑17 (MQ=255) gcatcacCAAAATCTGTGTGCTGCGGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTTTGCCAGCGTGACGGCTaa < 1:1150165‑M2/142‑1 (MQ=255) gCACGGACAAAATCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcagg > 2:20930‑M2/1‑16 (MQ=255) aCGGACAAAATCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggtt < 2:879542‑M2/149‑136 (MQ=255) acCAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGATAGCCACTCGCCAACCTGCTTTTGCCAGCGTGACGGCTAATGttt > 1:1312577‑M2/3‑149 (MQ=255) cAAAATCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgcc < 1:400055‑M2/149‑141 (MQ=255) | CCTCAGGCCGATGAACACGCAGGCTATGATTATTGATAAACTCCGCCTGGCCGTCGATCACGTCGATATTGGGCATATCCGCAAGATTATGAAAATTCTTATTACGTAAAAAATTAACCACTTCATTTTTACGCTGTATGGCACGGACAAAATCTGTGTGCTGCTGTGCGTCATGAACCAATGTTTTGGTTGGGATGCAGCCGATATTAATACAGGTCCCGCCATACATTGCATTTGATTGTTCGATGAGAGCCACTCGCCAACCTGCTTTTGCCAGCGTGACGGCTAATGTTTTT > NC_000913_3_hsa_pgi/319662‑319957 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |