New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_pgi	314984 =	64 (0.630)	16 (0.160)	14/294	7.6	18.5%	pseudogene (628/872 nt)	eaeH	pseudogene, attaching and effacing protein homology;factor; Not classified
	?	NC_000913_3_hsa_pgi	1049778 =	77 (0.770)					intergenic (‑34/‑55)	gfcA/insA	O‑antigen capsule production threonine‑rich inner membrane protein/IS1 repressor TnpA
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGGTGCCAGTAGTACCCGTCGTTGCCTCGGTCCCGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTC  >  NC_000913_3_hsa_pgi/1049630‑1049925                                                                                                                                                     |                                                                                                                                                    tggtgCCAGTAGTACCCGTCGTTGCCTCGGTCCCGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACgg                                                                                                                                                     <  1:1234444/149‑1 (MQ=255) gggtgCCAGTAGTACCCGTCGTTGCCTCGGTCCCGTTGGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACgg                                                                                                                                                     <  1:1201502/148‑1 (MQ=255)  ggtgCCAGTAGTACCCGTCGTTGCCTCGGTCCCGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACggg                                                                                                                                                    <  2:1137090/149‑1 (MQ=255)   gtgCCAGTAGTACCCGTCGTTGCCTCGGTCCCGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGt                                                                                                                                                   >  2:819295/1‑149 (MQ=255)   gtgCCAGTAGTACCCGTCGTTGCCTCGGTCCCGTTTGGTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGt                                                                                                                                                   <  1:901669/149‑1 (MQ=255)   gtgCCAGTAGTACCCGTCGTTGCCTCGGTCCCGTTTGCTGCTTCAGGGGCAGCAAACGCAGCGGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACgggg                                                                                                                                                   <  2:765307/149‑2 (MQ=255)   gtgCCAGTAGTACCCGTCGTTGCCTCCGTCCCGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGGGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGt                                                                                                                                                   <  2:501078/149‑1 (MQ=255)       cAGTAGTCCCCGTCGTTGCCTCGGTCCCGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCGTTATTCAGCGCAGGGACACTACGGGTGAtg                                                                                                                                               >  1:943808/1‑149 (MQ=255)       cAGTAGTACCCGTCGTTGCCTCGGTCCCGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATTAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGAtg                                                                                                                                               >  1:938802/1‑149 (MQ=255)       cAGTAGTACCCGTCGTTGCCTCGGTCCCGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGAtg                                                                                                                                               <  1:819295/149‑1 (MQ=255)           agtaCCCGTCGATGCCTCGGTCCCGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGAtgctgc                                                                                                                                           <  2:374352/149‑1 (MQ=255)             taCCCGTCGTTGCCTCGGTCCCGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCTTGGACAATACGGGTGATGCTGCCa                                                                                                                                         >  2:123633/1‑149 (MQ=255)              ccccGGCGTTGCCTCGGGCCCGTGGGTTGCGTCCGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATCAGGCTTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTCTTCCTCGCATGGACAATACGGGTGATGCTGCCaa                                                                                                                                        <  2:979784/148‑1 (MQ=255)               cccGTCGTTGCCTCGGTCCCGTTTGTTGCGTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTTATGCTGCCAAc                                                                                                                                       <  2:99760/149‑1 (MQ=255)               cccGGCGTTGCCTCGGTCCCGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAAc                                                                                                                                       <  1:1133313/149‑1 (MQ=255)                ccgtccgtGCCTCGGTCCCGTGTGTTGCTTCAGGGCCAGCAAACGCAGCGGGCGGCGTCAACATGCAGGGCATAAGGATTGCAGAAAGCTTTTGTTTCATAACTTTTCCTTTAATCATCGCATGGACAATACGGGTGATGCTGCCAACt                                                                                                                                      <  2:887913/149‑1 (MQ=255)                ccGTCGTGGCCTCGGTCCCGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACt                                                                                                                                      <  2:1462048/149‑1 (MQ=255)                 cgtcgtTGCCTCGGTCCCGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACtt                                                                                                                                     >  2:41248/1‑149 (MQ=255)                  gtcgtTGCCTCGGTCCCGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTa                                                                                                                                    >  1:597624/1‑149 (MQ=255)                   tcgtGGCCTCGGGCCCGTTTGTTGCTGCAGGGGCAGCAAAGGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCATAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGTCAATACGGGTGATGCTGCCAACTTAc                                                                                                                                   <  1:696879/149‑1 (MQ=255)                       tGCCTCGGTCCCGTTTGTTGCTTCAGGGGCAGCAAGCGCAGCTGGCGTCGTCCACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCGTTTAGTCATCGCATGGACAATACGGGTGCTGCTGCCAACTTACTGAt                                                                                                                               >  2:1304809/1‑149 (MQ=255)                       tGCCTCGGTCCCGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGAt                                                                                                                               <  1:656328/149‑1 (MQ=255)                        gCCTCGGTCCCGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGAtt                                                                                                                              >  2:477997/1‑149 (MQ=255)                          cTCGGTCCCGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTa                                                                                                                            <  2:1022410/149‑1 (MQ=255)                           tCGCTCCCGTTTGTTGCTTCAGGGTCAGCAAACGCAGCTGGAGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTATGTTTAAAAAAATTTCCTTTATTCATAGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAg                                                                                                                           >  2:1460313/1‑149 (MQ=255)                            cGGTCCGGTTTGTTTCTTCATTGGCAGCAAACGCATCTGGCGTCGTCATCATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCTTAACTTTTCCTTTATTCATGGCTTGGACAATACGGGTGATGCTGCCAACTTACTGATTTAgt                                                                                                                          <  2:255973/149‑1 (MQ=255)                            cGGTCCCGTTTGTTGCTTCAGGGGCTGCAAACGCAGCTGGCGGCGTCAACCTGAAGGCCTTAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAgt                                                                                                                          <  1:920566/149‑1 (MQ=255)                            cGGTCCCGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTatt                                                                                                                          <  1:167542/149‑3 (MQ=255)                            cGGTCCCGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAgt                                                                                                                          <  1:810963/149‑1 (MQ=255)                            cGGGCCCGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAgt                                                                                                                          <  1:1456132/149‑1 (MQ=255)                             ggTCCCGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAgtg                                                                                                                         >  2:101441/1‑149 (MQ=255)                              gTCCCGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAgtgt                                                                                                                        >  2:495940/1‑149 (MQ=255)                                 ccGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTatg                                                                                                                     >  2:730463/1‑149 (MQ=255)                                 ccGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTCGCGTCGGCAACATGAAGGCCATACGGATTGCATAAAGCTTGGGTTTCATACCATTTCCTTTATTAATCGCATGGACAATACCGGTGATGCTGCGAACTTACTGATTTTGTGTttg                                                                                                                     >  2:1027645/1‑149 (MQ=255)                                  cGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCCTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATATCTGTTCCTTTATTCATCGCATGGAAAATACGGGTGATGCTTGCACCTTACTGATGTAGTGTattt                                                                                                                    >  2:112936/1‑147 (MQ=255)                                        ttgCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGgtgt                                                                                                              <  1:451594/149‑1 (MQ=255)                                            ttCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGGGttttt                                                                                                          <  2:873915/149‑1 (MQ=255)                                            ttCAGGGGCAGCAAACGCAGCTGGAGTCGTCAAGATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGttttt                                                                                                          <  1:285874/149‑1 (MQ=255)                                              cAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAATCTTGTGTTTCATAACTTTTCCATTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGa                                                                                                        <  1:1246082/149‑1 (MQ=255)                                              cAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCAAAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGa                                                                                                        <  2:1022604/149‑1 (MQ=255)                                                  ggCAGCAATCGCAGCTGGCTTCGTCAACATGAAGTCCATATGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGtt                                                                                                    <  2:958194/149‑1 (MQ=255)                                                  ggCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGAGGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGtt                                                                                                    <  2:579172/149‑1 (MQ=255)                                                     agcaAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTtctc                                                                                                 <  1:477997/149‑1 (MQ=255)                                                     agcaAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTtctc                                                                                                 <  1:425941/149‑1 (MQ=255)                                                          aCGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTg                                                                                            <  1:382035/149‑1 (MQ=255)                                                           cGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGGGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTgg                                                                                           <  2:18673/149‑1 (MQ=255)                                                                     gtcgtcAACATGAAGGCCATACGGATTGCAGAAAGCTTGTGGTTCATAACTTTTCCTTTATTCATCGCCTGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTc                                                                                 <  2:1526967/149‑1 (MQ=255)                                                                        gtcAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTAt                                                                              <  1:477314/149‑1 (MQ=255)                                                                         tcAACATGCAGGCCTTAAGGATTGCAGTAAGCTTTTGTTTCATAACTTTTCCTTTATTCATCGCATGGACCATACGGGTGATGCTGCCTACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGGTCTCCAGTGGCTTCTGTTTCTATc                                                                             <  1:37819/149‑1 (MQ=25)                                                                         tcAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATTGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATc                                                                             >  1:219680/1‑149 (MQ=255)                                                                                gAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTc                                                                      <  1:101441/149‑1 (MQ=255)                                                                                    gCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCcctc                                                                  >  2:416448/1‑149 (MQ=255)                                                                                               tGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTa                                                       <  1:123633/149‑1 (MQ=255)                                                                                               tGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTa                                                       <  1:41248/149‑1 (MQ=255)                                                                                                  aGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTg                                                    >  1:1010250/1‑149 (MQ=255)                                                                                                   gAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGa                                                   >  2:584119/1‑149 (MQ=255)                                                                                                   caaaGATTGTGTTTCATAACTTTTCCTTTATTCTTCGCATGGACAATACGGGTGATGCTGCCAACTTTCTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCAATCAGCTGTCCCTCCTGTTCAGCTACTGa                                                   <  1:850926/148‑1 (MQ=255)                                                                                                    aaaGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGAc                                                  >  2:749681/1‑149 (MQ=255)                                                                                                      aGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACgg                                                <  1:495940/149‑1 (MQ=255)                                                                                                      aGCTTGTGTTTCATAACTTTTCCTTATTTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTGGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACgg                                                <  1:1460313/149‑1 (MQ=255)                                                                                                       gCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACggg                                               >  2:350215/1‑149 (MQ=255)                                                                                                          tgtgTTTCATAACTTTTCCTTTATTCATAGCATGGACAATACGGGGGATGCTGACAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGggtg                                            <  2:1522107/149‑1 (MQ=255)                                                                                                              tttCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGc                                        <  1:1304809/149‑1 (MQ=255)                                                                                                              tttCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTAAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGc                                        <  1:112936/149‑1 (MQ=255)                                                                                                                tCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCAGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGt                                      >  1:268586/1‑149 (MQ=255)                                                                                                                tCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGGGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGt                                      <  1:616922/149‑1 (MQ=255)                                                                                                                    aaCTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACg                                  <  2:597624/149‑1 (MQ=255)                                                                                                                           ccTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAg                           >  1:608791/1‑149 (MQ=255)                                                                                                                                    aTCGCATGGACAATACGGGTGATTCTGACAACATACTTATTTAGTTTATGATGGTGTTTTTGAGTTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCACTCCTGTTCAGATACTGAAGGGTTTGTGTTTAAAGGCAAAAGAAATGACgg                  >  1:50241/1‑149 (MQ=14)                                                                                                                                     tCGAATGGACAATACGGGGGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGa                 <  2:938802/149‑1 (MQ=255)                                                                                                                                     acGCAGGGAAAATACGGGTGATGCTGCCAACTTACTTATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGa                 <  2:943808/148‑1 (MQ=255)                                                                                                                                        cATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACAt              >  2:236915/1‑149 (MQ=255)                                                                                                                                          tGGCCAATACGGGTGATGCGGCCACCTTACTGATATAGTGTATGATGGTGTTTTTGTGGTTCGTCAGTGGCTTCTGTTTCTATCAGCTGTCCCTGCTGTTCAGCTACTTACGGGGTGGTGCGTAACGGCAAAAGCACTTCCggcgataa            >  2:552818/1‑143 (MQ=11)                                                                                                                                          tGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCATGTTCAGCTACTTACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGCCATCa            >  2:304073/1‑149 (MQ=255)                                                                                                                                           ggACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAg           >  1:272014/1‑149 (MQ=40)                                                                                                                                             aCAATACGGGTGATGCTGCCAACTTACTTATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAgcg         <  1:1027645/149‑1 (MQ=38)                                                                                                                                                 tACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTAt     >  2:1039916/1‑149 (MQ=35)                                                                                                                                                    gggTGATGCTGCCAACTTACGGAGTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACCGCAAAAGCACTGCCGGACATCAGCGCTAtctc  >  2:663142/1‑149 (MQ=12)                                                                                                                                                     |                                                                                                                                                    TGGTGCCAGTAGTACCCGTCGTTGCCTCGGTCCCGTTTGTTGCTTCAGGGGCAGCAAACGCAGCTGGCGTCGTCAACATGAAGGCCATAAGGATTGCAGAAAGCTTGTGTTTCATAACTTTTCCTTTATTCATCGCATGGACAATACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTC  >  NC_000913_3_hsa_pgi/1049630‑1049925

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.