New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi = 31499270 (0.690)21 (0.210) 21/294 5.6 19.6% pseudogene (636/872 nt) eaeH pseudogene, attaching and effacing protein homology;factor; Not classified
?NC_000913_3_hsa_pgi = 1050545 103 (1.030)intergenic (+15/+418) insB1/cspH IS1 transposase B/stress protein, member of the CspA‑family
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 104 total aligned reads displayed.

AATTGAGCGGTATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATCCCCCTCTG  >  NC_000913_3_hsa_pgi/1050398‑1050692
                                                                                                                                                   |                                                                                                                                                   
tgcacaGCGGTATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCg                                                                                                                                                    <  1:15067/144‑1 (MQ=17)
         gTATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAAtacgt                                                                                                                                           >  2:576214/1‑149 (MQ=35)
           ataACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAAtacgtac                                                                                                                                         >  1:555674/1‑149 (MQ=35)
           ataACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAAtacgtac                                                                                                                                         <  1:1511009/149‑1 (MQ=35)
               ccTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCtt                                                                                                                                     >  2:848476/1‑149 (MQ=39)
                cTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTg                                                                                                                                    >  1:818190/1‑149 (MQ=40)
                 tGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTga                                                                                                                                   <  1:272981/149‑1 (MQ=40)
                 tGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGGCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTga                                                                                                                                   <  2:1091527/149‑1 (MQ=255)
                      cTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACATAGTCATCGGGCATTTTCTGAACATAAATCACTATCAATAAGTTGGAGTCATAACCGACAATACGTACGCTTGAGATCa                                                                                                                              <  1:344429/149‑1 (MQ=255)
                      cTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCa                                                                                                                              <  1:1158025/149‑1 (MQ=255)
                       tGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGTAGCTGAATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAg                                                                                                                             <  1:1389933/149‑1 (MQ=255)
                        gAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAgg                                                                                                                            >  1:424963/1‑149 (MQ=255)
                         cggCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGGGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACTCTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGa                                                                                                                           <  2:58183/148‑1 (MQ=255)
                         aGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGTAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGa                                                                                                                           <  2:51933/149‑1 (MQ=255)
                             agcaCCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGt                                                                                                                       >  2:427091/1‑149 (MQ=255)
                              gcaCCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTTGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTc                                                                                                                      <  2:1652049/149‑1 (MQ=255)
                                aCCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACATAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTa                                                                                                                    <  1:477074/149‑1 (MQ=255)
                                   tGGCACGGCTGGGACGGCACTCGCTGTCGTTCTCAACATCCGCGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACtt                                                                                                                 <  2:409328/149‑1 (MQ=17)
                                    ggCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACttt                                                                                                                <  1:669759/149‑1 (MQ=255)
                                    gccACGGCGGGGACGGAAGTCGCTCTCGGTCTCAAAATCGTATGATCTGCATGACAAACTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCACGATTGTCTACttt                                                                                                                <  2:788026/147‑1 (MQ=17)
                                     gCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTg                                                                                                               <  1:237147/149‑1 (MQ=255)
                                      cACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTTGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCTTTACCGACACTACGTACGCTTGAGATCAGGATTGTCTACTTTGa                                                                                                              <  2:1517850/149‑1 (MQ=255)
                                      cACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGa                                                                                                              <  2:111651/149‑1 (MQ=255)
                                            tGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATaa                                                                                                        >  2:528887/1‑149 (MQ=255)
                                            tGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATaa                                                                                                        >  1:554443/1‑149 (MQ=255)
                                                  ggAAGTCGCAGTCGTTCTCAAAATCGGTGGAGCTGCTTTACAAAGTCATCGGGCATTATCTGAACATAAAAAACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGGTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCt                                                                                                  >  2:406578/1‑149 (MQ=18)
                                                   gAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAATCACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCtt                                                                                                 <  2:1641124/149‑1 (MQ=255)
                                                   gAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCtt                                                                                                 >  1:745975/1‑149 (MQ=255)
                                                    aaGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAAAAAAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACTTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTtg                                                                                                >  1:573471/1‑149 (MQ=255)
                                                     aGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTtgt                                                                                               <  1:848476/149‑1 (MQ=255)
                                                        cGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGaa                                                                                            <  1:521964/149‑1 (MQ=255)
                                                              cGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTcc                                                                                      <  2:555674/149‑1 (MQ=255)
                                                              cGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTcc                                                                                      <  2:471601/149‑1 (MQ=255)
                                                              cGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTcc                                                                                      <  1:771597/149‑1 (MQ=255)
                                                              cGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTcc                                                                                      <  1:971720/149‑1 (MQ=255)
                                                               gTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAAAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTTAAAACTcca                                                                                     >  2:885456/1‑148 (MQ=255)
                                                                   tcAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTc                                                                                 >  1:370969/1‑149 (MQ=255)
                                                                    cAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAACCACTATCAATAAGTTGGAGTCAATACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACCTCCTTGTGAAATCTCCCATTcc                                                                                >  1:917250/1‑149 (MQ=255)
                                                                     aaaaTCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCt                                                                               >  1:1230313/1‑149 (MQ=255)
                                                                     aaaaTCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCt                                                                               >  2:861481/1‑149 (MQ=255)
                                                                     aaaaTCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACAGACAATACTTACGCTTGATATCAGTATTGTCTACTTTGAGTATAACATCCTTGTGAAATCACCCTTTcat                                                                               >  2:697098/1‑147 (MQ=21)
                                                                            gTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCg                                                                        >  2:195638/1‑149 (MQ=255)
                                                                             tGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGc                                                                       >  1:326602/1‑149 (MQ=255)
                                                                              ggAGCTGGATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCt                                                                      <  2:424963/149‑1 (MQ=255)
                                                                                aGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTg                                                                    <  1:252188/149‑1 (MQ=255)
                                                                                 gCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGc                                                                   >  1:299153/1‑149 (MQ=255)
                                                                                  cTGCATGACAAAGTCATCGGGCATTATCTTAACATAAAACACTATGAATAAGTTGGAGTCATTACCGACATTACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCa                                                                  <  2:1364409/149‑1 (MQ=255)
                                                                                   tGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCAc                                                                 <  1:576214/149‑1 (MQ=255)
                                                                                    gCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACt                                                                >  1:448401/1‑149 (MQ=255)
                                                                                      aTGACTAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACtat                                                              <  1:557796/149‑1 (MQ=255)
                                                                                       tGACAAAGTCATCGGGCATTATCTGAACATAAAACACTTTCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACtata                                                             >  2:540393/1‑149 (MQ=255)
                                                                                       tGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACtata                                                             >  1:571906/1‑149 (MQ=255)
                                                                                       tGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACtata                                                             <  1:19347/149‑1 (MQ=255)
                                                                                         aCAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACATTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACtatatt                                                           >  1:355785/1‑148 (MQ=255)
                                                                                          cAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATAc                                                          >  1:1661644/1‑149 (MQ=255)
                                                                                          cAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATAc                                                          >  1:1052476/1‑149 (MQ=255)
                                                                                               tCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCgg                                                     >  1:286381/1‑149 (MQ=255)
                                                                                                 aTCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGt                                                   <  1:37967/149‑1 (MQ=255)
                                                                                                 aTCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGt                                                   <  1:171056/149‑1 (MQ=255)
                                                                                                  tCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTCCCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATACCATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTa                                                  >  2:133519/1‑149 (MQ=255)
                                                                                                    gggCATTATCTGAACATAAAACACTATCAATAAGTTGGATTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTTAGTATAACATCCTTGTGAAAACTCACTTTCCTCATACCGCTTGCAATATATACTGCCGGTAgg                                                >  1:937483/1‑149 (MQ=38)
                                                                                                    gggCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAgg                                                >  2:710593/1‑149 (MQ=255)
                                                                                                     ggCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGa                                               <  2:1048287/149‑1 (MQ=255)
                                                                                                               gAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATGACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCa                                     >  1:400018/1‑149 (MQ=255)
                                                                                                               gAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCa                                     >  1:982335/1‑149 (MQ=255)
                                                                                                               gAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCa                                     <  1:710593/149‑1 (MQ=255)
                                                                                                               gAACATAAAACACTATCAATAAGTAGGAGTCATTACAGACAATACGTACGCTTGAGATCAGGATTGTCTACTATGAGTATAACATCCTAGTGAAAACTCCCATTCCTCATACCGCTTGCACTATATACTCCGGGTAGTAAAGGCGCTCa                                     >  2:1408298/1‑149 (MQ=38)
                                                                                                                aaCATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCag                                    >  2:1405580/1‑149 (MQ=255)
                                                                                                                aaCATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCag                                    >  2:47396/1‑149 (MQ=255)
                                                                                                                 aCATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCaga                                   <  2:818190/149‑1 (MQ=255)
                                                                                                                  cATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCagag                                  >  1:1307711/1‑149 (MQ=255)
                                                                                                                    tAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAggg                                <  2:299153/149‑1 (MQ=255)
                                                                                                                     aaaaCACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAATGCGCGCAGAGGGa                               >  2:920680/1‑149 (MQ=255)
                                                                                                                     aaaaCACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGa                               >  1:75271/1‑149 (MQ=255)
                                                                                                                     aaaaCACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGAACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGa                               >  2:1022677/1‑149 (MQ=255)
                                                                                                                       aaCACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGTGGGTAGGAAAGGCGCGCAGAGGGaaa                             <  1:427091/149‑1 (MQ=255)
                                                                                                                       aaCACTATCAATAAGTTGGAGTCATTACCGACAATACGTAAGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGaaa                             >  2:574458/1‑149 (MQ=255)
                                                                                                                                  tAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGt                  <  1:528887/149‑1 (MQ=255)
                                                                                                                                   aaGTTTGAGTCATTACCGACAATCCGTACCCTTGAGATCATGATGGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCAAACCGCTTGCACTATATACTGCGTGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGtt                 <  2:658209/149‑1 (MQ=255)
                                                                                                                                    aGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTa                >  1:757068/1‑149 (MQ=255)
                                                                                                                                    aGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTa                >  1:1166831/1‑149 (MQ=255)
                                                                                                                                    aGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTa                >  1:1626155/1‑149 (MQ=255)
                                                                                                                                      ttGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAAc              >  1:689743/1‑149 (MQ=255)
                                                                                                                                        ggAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTa            >  2:446666/1‑149 (MQ=255)
                                                                                                                                        ggAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTa            >  2:651058/1‑149 (MQ=255)
                                                                                                                                         gAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTAt           >  1:921639/1‑149 (MQ=255)
                                                                                                                                         gAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTAt           >  1:1413521/1‑149 (MQ=255)
                                                                                                                                           gTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATcc         >  1:712031/1‑149 (MQ=255)
                                                                                                                                            tCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGCATTATAAGATTGTTAACTATccc        >  2:157872/1‑149 (MQ=255)
                                                                                                                                            tCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATccc        >  1:1388464/1‑149 (MQ=255)
                                                                                                                                            tCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATccc        >  1:1474308/1‑149 (MQ=255)
                                                                                                                                            tCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATccc        >  2:1601971/1‑149 (MQ=255)
                                                                                                                                            tCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGAGCGCAGAGGGAAATATAAGATTGTTAACTATccc        >  1:461178/1‑149 (MQ=255)
                                                                                                                                            tCATTACCGACAATACGTACGCTTGAGATCACGATTGTGTACTTTGAGTATAACATCCTTGTTAAATCTCCCTTTCCTCATACCGCATGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATccc        >  1:1388470/1‑149 (MQ=255)
                                                                                                                                             aaTTACCGACAATACGTAAGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATcccc       <  2:917250/148‑1 (MQ=255)
                                                                                                                                              aTTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTTCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATccccc      >  2:233553/1‑149 (MQ=255)
                                                                                                                                                 aCCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATCCCCctct   <  1:1272226/149‑1 (MQ=255)
                                                                                                                                                  ccGACAATACGTACGCTTGAGATCATGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATCCCCCTCTg  <  1:473920/149‑1 (MQ=255)
                                                                                                                                                  ccGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTGTATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATCCCCCTCTg  >  2:1335153/1‑149 (MQ=255)
                                                                                                                                                  acGATAATACTTACGATTGAGATCATGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTGATACCGCTTGCACTTTATACTGCGGTTAGGAAAGGCGCTCAGATGGAAATATAAGATTGTTAACTATCCCCCTCTg  <  1:885456/148‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
AATTGAGCGGTATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATCCCCCTCTG  >  NC_000913_3_hsa_pgi/1050398‑1050692

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.