Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913_3_hsa_pgi1,708,6550AG20.3% 95.8 / 19.0 66E579E (GAA→GAGrsxCSoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base A (14/33);  new base G (7/5);  total (25/41)
Fisher's exact test for biased strand distribution p-value = 9.30e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCC  >  NC_000913_3_hsa_pgi/1708509‑1708781
                                                                                                                                                  |                                                                                                                              
cGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCCGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGATcc                                                                                                                              >  1:1461822/1‑149 (MQ=255)
cGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAAcc                                                                                                                              <  1:1476599/149‑1 (MQ=255)
 gTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCa                                                                                                                             <  2:1614038/149‑1 (MQ=255)
     atcgcAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGaac                                                                                                                         <  2:48833/147‑1 (MQ=255)
     aGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGaac                                                                                                                         <  1:58375/149‑1 (MQ=255)
      gcgcAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCGAGCGGCTTATGCGGGACGAGacca                                                                                                                        >  2:825438/1‑149 (MQ=38)
        gcAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGaacaac                                                                                                                      <  1:1209018/149‑1 (MQ=255)
        gcAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGaacaac                                                                                                                      <  1:747045/149‑1 (MQ=255)
        gcAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAACCAGaacaac                                                                                                                      >  1:978899/1‑149 (MQ=255)
         cAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCCGCTATCGCCCGCGCCAAAGCGCGCAAGCTCGAACAGCAACAGCCTAATGCGGAACCAGAacaaca                                                                                                                     >  2:1322430/1‑149 (MQ=255)
           aGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAgg                                                                                                                   <  1:343754/149‑1 (MQ=255)
            gCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGt                                                                                                                  <  2:56667/149‑1 (MQ=255)
            gCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGt                                                                                                                  <  2:257012/149‑1 (MQ=255)
            aactgagCGAACCAGGAACAACTTCAGGAAACTCACGACGCAGCACAACATGCTGATCCTCGTAAATCTGCCGTAGAAGCAGCTATAGCCCGAGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGt                                                                                                                  <  1:190866/145‑1 (MQ=14)
                  gCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATcc                                                                                                            <  2:580251/149‑1 (MQ=255)
                      aaCAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGTCTAATGCGGAACCAGAACAACAGGTCGATCCgcgc                                                                                                        <  1:1201896/149‑1 (MQ=255)
                        cAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCaa                                                                                                      <  1:603413/149‑1 (MQ=255)
                           gCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGACCCAGATCTTCAGGTCGATCGgcgctatgc                                                                                                   >  2:888167/1‑144 (MQ=25)
                           gCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAgc                                                                                                   >  1:875581/1‑149 (MQ=255)
                           gCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAgc                                                                                                   >  2:142489/1‑149 (MQ=255)
                           gCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAgc                                                                                                   <  1:142489/149‑1 (MQ=255)
                              gAACTGATGCAAACTAACGAAGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAgccgc                                                                                                <  2:1531082/149‑1 (MQ=255)
                                       caAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGc                                                                                       <  2:638304/149‑1 (MQ=255)
                                            tAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGTCGCCGCTa                                                                                  >  1:1426319/1‑149 (MQ=255)
                                               cgacgCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCAAAACGCGAAAACCCTCCGAAGAAGCCCCTAtag                                                                               >  1:1555808/1‑147 (MQ=21)
                                                gccgCAGCAACCGTTGCAGATCCACCTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGc                                                                              <  2:916067/147‑1 (MQ=255)
                                                gacgCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATAGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACAAGAACAACAGGTCGATCCGCGCAAAGCCGCCATCGGAACCGCTaaggg                                                                              >  2:1563529/1‑145 (MQ=18)
                                                 acgCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTGATGCGGAGCCCGCACGTCAGGTCGCACCGCGCGAGGCGGCCGGCGAAGCCGCTTTTGcc                                                                             >  1:559788/1‑149 (MQ=18)
                                                          ccGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCACCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCaaa                                                                    <  1:485579/149‑1 (MQ=255)
                                                              tGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAgcgc                                                                <  1:1537797/149‑1 (MQ=255)
                                                                gtGATCCACGTAAAACTGCCGTTTAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAgcgcgc                                                              <  1:1386451/148‑1 (MQ=255)
                                                                    tCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGc                                                          <  2:735102/149‑1 (MQ=255)
                                                                      ctcgaaaaaCTGCCGTAGAAGCAGCTATTGCCCGGGCCTAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTg                                                        <  1:543627/144‑1 (MQ=11)
                                                                       aCGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGACCCAGAACAACAGGTCGATACCCGCACACACCCCGTCGAACCCGCTATGGCCCGGGCCAACGCGCGCAAGCTgg                                                       >  1:1182494/1‑149 (MQ=17)
                                                                         gTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGaa                                                     <  1:964748/149‑1 (MQ=255)
                                                                          tAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGAAAGCTGGAACAGCAACAGGCTAATGCGGACCCAGAACAACAGGTCGAACCGCGCAAAGCCGCCGGCGAAGCCGCTAGTGCGCGGGCGAACGCGAGCGAGCTGGagc                                                    >  1:1004567/1‑147 (MQ=17)
                                                                             aaCTGCCGTTGAAGCAGCTAGCGCCCGCGCCACCGCGCGCAAGCTGGAACAGCAACAGCCTAATGCGGAACCAGAACACCAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGc                                                 <  1:888167/149‑1 (MQ=14)
                                                                                tGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAgg                                                                                                                   >  2:985235/1‑80 (MQ=255)
                                                                                tGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAgg                                                                                                                   <  1:985235/80‑1 (MQ=255)
                                                                                 gCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACa                                             <  1:1627195/149‑1 (MQ=255)
                                                                                 gCCGTTGAAGCAGCTATCGACCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACa                                             <  2:20276/149‑1 (MQ=255)
                                                                                       gAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGt                                                                                                                  <  2:1332571/74‑1 (MQ=255)
                                                                                       gAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGt                                                                                                                  >  1:1332571/1‑74 (MQ=255)
                                                                                       gAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGt                                                                                                                  >  1:298278/1‑74 (MQ=255)
                                                                                       gAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGt                                                                                                                  >  1:304054/1‑74 (MQ=255)
                                                                                       gAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGt                                                                                                                  <  2:298278/74‑1 (MQ=255)
                                                                                       gAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGt                                                                                                                  <  2:304054/74‑1 (MQ=255)
                                                                                              cTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAgccg                                                                                                 <  2:201708/84‑1 (MQ=18)
                                                                                              cTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAgccg                                                                                                 >  1:201708/1‑84 (MQ=255)
                                                                                               aaTCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGACCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAAc                               <  2:20688/148‑1 (MQ=255)
                                                                                                  ctcacgcgACAAAGCGCGCAATCTGGAACATCAACAGGCTAATTCGGAACCAGAACAACATGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCag                            <  1:706804/145‑1 (MQ=14)
                                                                                                   cccccCGCCCACGCGCGCAAGCAGGAACAGCATCAGCCTACTCCCGACCCAGCACCCCAGGCCGATCCCCGCAAACCCGCCGTCGAAGCCGCTATAGCCCGGGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCaga                           <  2:1421703/148‑1 (MQ=14)
                                                                                                   cacccggcCAAAGCGCGCAATCTGGCACAGCAACAGGCAACTGAGGAACCAGAACAACATGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCaga                           <  2:573603/143‑1 (MQ=14)
                                                                                                    cccGCGCCATATCTAGCAATCTGGAACAGCAACAGGATAATTCGGAACCATAAAAACATGGCGATCCTCGTAAAGCTGCCGTAGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCagaa                          <  2:875581/149‑1 (MQ=14)
                                                                                                    cccGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGaacaac                                                                                                                      >  2:1260761/1‑57 (MQ=255)
                                                                                                            cacgctcgcAATCAGGAACATCATCAGGATAATGAGGAACCAGAACAACTTGTCGATCCGCGAAAACCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGt                  <  1:1322430/143‑1 (MQ=14)
                                                                                                            aaaGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGc                                                                              <  1:858048/89‑1 (MQ=18)
                                                                                                            aaaGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGc                                                                              >  2:858048/1‑89 (MQ=33)
                                                                                                               gcgcgcAAGCTGGAACAGCAACAGGCTAATGCGGATCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCg                                                                                     <  2:1652503/79‑1 (MQ=21)
                                                                                                               gcgcgcAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCg                                                                                     >  1:1652503/1‑79 (MQ=34)
                                                                                                                 gcgcAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAGCGGGaa                                                     >  1:1017347/1‑109 (MQ=16)
                                                                                                                     aaGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGc                                                                                       <  2:935282/71‑1 (MQ=34)
                                                                                                                     aaGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGACGAAGc                                                                                       >  1:935282/1‑71 (MQ=21)
                                                                                                                         tGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCAGCAGTCGAGGCCGCTATTGAGCGTGCGAAAGCGCGGAAGCTGGAGCAGGAAGCGGCTACTGCGGAGCCAGAAGAGCAGGTCGATACGCGaaaa     >  2:596230/1‑149 (MQ=11)
                                                                                                                            aactgtaaCATGCTTATGCGGAAGCAGAACAAGTGGTTGATCCTCGAAAATCTGCCGTAGAAGCAGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACATCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAgcc  <  1:1563529/143‑1 (MQ=14)
                                                                                                                              cAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAgc                                                                  >  2:1472191/1‑83 (MQ=18)
                                                                                                                                                  |                                                                                                                              
CGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCC  >  NC_000913_3_hsa_pgi/1708509‑1708781

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: