| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913_3_hsa_pgi | 4,235,433 | Δ1 bp | 100% | intergenic (‑2200/‑501) | lysC ← / → yjbE | lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_hsa_pgi | 4,235,433 | 0 | A | . | 93.0% | 4047.4 / 264.7 | 1083 | intergenic (‑2200/‑501) | lysC/yjbE | lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein |
| Reads supporting (aligned to +/- strand): ref base A (34/32); new base . (482/525); total (520/563) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: Polymorphic indel expands or contracts a homopolymer stretch. | |||||||||||
Only 100 of 1136 total aligned reads displayed.
TTTGACCAGTGGGGAGTGGAGCTGGGAAAGCAGCTGGCTAAGAAAATAGAGCCTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAATAAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATT > NC_000913_3_hsa_pgi/4235285‑4235577 | tttGACCAGTGGGGAGTGGAGCTGGGAAAGCAGCTGGCTAAGAAAATAGAGCCTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATTAAGCAGCAGAGCGAGGCCAGAAGCCAATa > 1:49805/1‑149 (MQ=255) gACCAGTTGGGAGGGGAGCTGGGAAAGCAGCAGGCTAAGAAAATAGAGCCTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACGTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAATaatc < 2:237972/149‑3 (MQ=255) gACCAGTGGGGAGTGGAGCTTGGAAAGCAGCTGGCTAAGAAAATAGAGCCTGGGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCGCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAATactc < 2:396585/149‑4 (MQ=255) cAGGGGGGAGTGGAGCTGGGAAAGCAGCTGGCTAAGAAAATAGAGCCTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑Aatcatc < 1:633623/149‑1 (MQ=255) tGGGGAGTGGAGCTGGGAAAGCAGCTGGCTAAGAAAATAGAGCCTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCAtcgtc < 1:922702/149‑1 (MQ=255) gggAGTGGAGCTGGGAAAGCAGCTGGCTAAGAAAATAGAGCCTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGa < 1:173281/149‑1 (MQ=255) gAGTGGAGCTGGGAAAGCAGCTGGCTAAGAAAATAGAGCCTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGata > 1:214588/1‑149 (MQ=255) aGCTGGGAAAGCAGCTGGTTAAGAAAATAGAGCCTGAGCTTGATGGCCGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAATAA‑TCATCGTCGATATGTAGg > 1:805670‑M2/1‑148 (MQ=255) aGCTGGGAAAGCAGCTGGCTAAGAAAATAGAGCCTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAATAA‑TCATCGTCGATATGTAGg < 2:76359‑M2/149‑2 (MQ=255) gtgGGAAAGCAGCTGGCTAAGAAAATAGAGCCTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAACCAGCAGCGCGAGGCCAGAGTCCAATAAC‑CATCGTCGATATGTAGgcc < 2:517459‑M2/148‑4 (MQ=255) tGGAAAAGCAGCTGGTTAAAAAAATAGAGCCTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAATAA‑TCATCGTCGATATGTAGgccg > 2:740404‑M2/1‑145 (MQ=255) ggAAAGCAGCTGGCTAAGAAAATAGAGCAGGAGCGGGGGGGGGGTGGTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAATAA‑TCATCGTCGATATGTAGgccgga > 1:437260‑M2/1‑143 (MQ=255) gAAAGCAGCTGGCGAAGAAAATAGAGCCTGAGTTTGATGGCCGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAATAAAA‑ATCGGCTATATGTAGgccggat > 2:319488‑M2/1‑142 (MQ=255) aaaGCAGCTGGCTAAGAAAATAGAGCCTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCCACTTCCTCATGCAGCAGCGCGAGTCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATa < 1:534954/149‑1 (MQ=255) aaGGAGCTGGCTAAGAAAATTGAGCCTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATaa < 2:912084/149‑1 (MQ=255) aaGCAGCTGGCTAAGAAAATAGGGCATGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATaa < 1:429464/149‑1 (MQ=255) aaGCAGCTGGCTAAGAAAATAGAGCCTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATaa < 2:539949/149‑1 (MQ=255) gcagcTGGCTAAGAAAATAGAGCCTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAgg < 1:150139/149‑1 (MQ=255) agcTCGCTAAGAAAATAGAGCCTGAGTTTGATTGTATTGCTTAAGTTACCTCTTACGTCGCTTTTACCAATGGGCTCAGCAACTTCATCAAGCAGCAGCGCGAGGCCATGGTCCAAT‑AATCCTCGTCTATATGTAGGCCGGATAAGGCg < 2:34432/149‑1 (MQ=255) gCTAAGAAAATAGTGCCTGAGCTTGATGTCATTGCTCAAGTTACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAc < 1:381430/149‑1 (MQ=255) tAAGAAAATAGAGCCTGAGCTTGATGGCAGTGCTCAATTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgc < 1:549103/149‑1 (MQ=255) tAAGAAAATAGAGCCTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCCTCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCTATATGTAAGCCGGATAAGGCGTTCAcgc > 1:400523/1‑149 (MQ=255) tAAGAAAATAGAGCCTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGTATAAGGCGTTCAcgc > 2:44499/1‑149 (MQ=255) tAAGAAAATAGAGCCTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgc > 1:103288/1‑149 (MQ=255) aaGAAAATAGAGCCTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgcc < 1:969123/149‑1 (MQ=255) gAAAATAGAGCCTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGATCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTCGCCCGGAAAAGGCGTTCAcgcccc > 2:60231/1‑147 (MQ=255) aaTAGAGCCTGAGCCTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATc > 2:198461/1‑149 (MQ=255) tatagCCTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCg < 1:661103/146‑1 (MQ=255) tAGAGCCTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACCCCGCATccc > 2:181492/1‑148 (MQ=255) gagCCTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGAGATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc < 1:646912/149‑1 (MQ=255) gCCGGAGGTTGTTGGCAGGGCCCAGTGGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCaa < 2:83311/149‑1 (MQ=38) ccTGAGCTTGATGGCAGTGCTCAAGTTACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAc < 1:311924/149‑1 (MQ=255) ccTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATaa > 2:803988/1‑125 (MQ=255) ccTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAc < 1:521462/149‑1 (MQ=255) cTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGTGCTTATCAATTTCATCAAGCAGCAGCTCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAcc < 1:27585/149‑1 (MQ=39) tGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTGCATCAAGCAGCGGCGCCAGGCCAGAGTCCAAT‑AATCATCGTCTATATGTAGGCCGGATAAGGCCTTTACGCCCCATCCGGCAACCg > 2:1625/1‑149 (MQ=255) gAGCTTTATGTCAGTTCTTAAGTGACCTCTCACGACGCTTCTACCAATGGGATCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGa < 1:416899/149‑1 (MQ=38) cTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGc > 2:118057/1‑149 (MQ=255) cTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGT‑CAACTACTGAACCGCGATACGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGc > 1:784580/1‑149 (MQ=38) ttGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGcc > 2:254433/1‑149 (MQ=255) tGAGGGCAGTGCTCAAGTGACCCCACACGACGCTTCTACCTTTGGGCTCATCAACTTCATCAAGCAGGAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCt < 2:790325/149‑1 (MQ=38) aTGGCAGTTCTCAAGTGCCCTCTCACGACGCTTATACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGa < 1:93865/149‑1 (MQ=255) tGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGAt > 1:677198/1‑149 (MQ=255) ggCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGAACCGCGAGGCCAGAGGCGGAT‑AATCGTCCTCCTTACGGAACCCGGATAAGGCATTCACCCCGCATCCGGCAACCGATACCCGAtc > 2:964995/1‑148 (MQ=255) gCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGc < 1:729108/149‑1 (MQ=255) gCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCAGCAACCGATTCCTGATGc > 1:791866/1‑149 (MQ=255) cAGTGCTTAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCC‑CCACCTCACCGGCGTTCTGCTTCTGCCATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCg < 1:740659/149‑1 (MQ=255) aGTGCTCAAGTGACCTCTCACGACGTTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGa < 1:71657/149‑1 (MQ=255) tGCTCAAGTGACCTCTCACGACGCGTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcg > 1:901405/1‑149 (MQ=255) aaGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCATAAAGCGAcgcgagc > 2:356741/1‑146 (MQ=39) gACCACTCACGACGCTACAACCATAGAGCCCATCAATTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGt < 1:766923/149‑1 (MQ=25) aCCTCTCAGGGCGCTTCTACCTATGGGCTTATCAACTTCTTCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATAGGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTc < 1:198066/149‑1 (MQ=38) aCCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTc > 2:682449/1‑149 (MQ=255) ccTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCt > 1:872871/1‑149 (MQ=255) ctctCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCtt > 2:776466/1‑149 (MQ=255) ctctCACGACGCTTCTACCAATGGGCTCATCAACTTCACCAAGCAGCAACGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGATCACGCCGCATCCGGCAACCGATGCCTGACTCTCCGCGGACGCATCtc > 2:880728/1‑148 (MQ=38) tctcACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTa > 1:480793/1‑149 (MQ=255) ctcACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAATAA‑TCATCGTCGATATGTAGgccg < 2:21633‑M2/89‑5 (MQ=255) cactgcgCTGCTACCAATTGGCTTATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCa < 2:94451/144‑1 (MQ=37) cACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCa < 1:1000162/149‑1 (MQ=255) acgacgCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGACAAGCCTTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAg < 1:697181/149‑1 (MQ=255) acgacgCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCACGGGAAGCA‑AGATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATAAGACGCGACCGCGTcgcatcat < 1:986541/149‑8 (MQ=21) gacgCTTCTACCAATGGGCTCATCAACCTCATCAACCAGCAGCGCGAGCCCAGAGT‑CACACAATCATCGTCGATATGTAGGCCGGATAAGGCTTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTAAAAGGc < 1:457628/149‑1 (MQ=38) cTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAATAA‑TCATCGTCGATATGTAGgcc > 1:99738‑M2/1‑76 (MQ=255) cTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAAGCGGTCGCGTCTTATCAGGCCtcc > 1:451539/1‑147 (MQ=255) ttCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACa < 1:757305/149‑1 (MQ=255) cTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTCCAgg > 2:669937/1‑149 (MQ=255) cAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATg > 2:570265/1‑107 (MQ=255) cAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGa > 2:137684/1‑149 (MQ=255) cAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTAAAGGTCGa > 1:257673/1‑149 (MQ=255) tGGGCTAATCTACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATTGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGc < 1:333803/149‑1 (MQ=255) gggCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGTCAACCGATGACTGATACGACGCGGACGCGTCTTATCAGGACTACCGGTCGATGcc > 1:584443/1‑149 (MQ=37) tcatcaACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGata > 2:703161/1‑149 (MQ=255) catcaACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcgc > 2:71324/1‑111 (MQ=255) catcaACTGCATTACGCAGCTGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGatat < 2:280385/149‑1 (MQ=25) atcaACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCa > 2:980534/1‑76 (MQ=255) atcaACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATg > 2:591479/1‑149 (MQ=255) tcaACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTTATTCGACGCGGTCGCGTCTTATAAGGCCTACAGATCGATGCCGCTATGt > 2:629991/1‑149 (MQ=37) tcaACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGa < 2:857205/101‑1 (MQ=255) aCTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCa > 2:553668/1‑121 (MQ=255) aCTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGAGGTCGCGTCTTATCAAGCCTACAGGTCGATACCGATATGTACa > 1:23745/1‑149 (MQ=255) cTTCCTCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCTGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACAt < 1:139953/149‑1 (MQ=255) cTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACAt > 2:294797/1‑149 (MQ=255) cTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACAt < 2:374969/149‑1 (MQ=255) ttCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATAAGTACATc > 1:119741/1‑149 (MQ=255) ttCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTAACAGGCCTACAGGTCGATGCCGATATGTACATc > 1:363358/1‑149 (MQ=255) ttCATCAAGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGCAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATc < 1:28545/149‑1 (MQ=255) aaGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGGCTTATCAGGCCTACAGGACGATGCCGATATGTACATCGTATTc > 1:614014/1‑149 (MQ=255) aaGCAGCAGCGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATACGACACGGTCGCATCTTATCAGGCCTACAGGTCGATGACGATATGTACATCGTATTc > 1:622189/1‑149 (MQ=38) aaGCAGCAGCGCGACGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTc < 2:650256/149‑1 (MQ=255) gcagcagcGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGGCTACAGGTCGATGCCGATATGTACATCGTATTCgg < 2:423307/149‑1 (MQ=255) gcagcagcGCGAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCgg < 1:950854/149‑1 (MQ=255) agcagcGCGAGGCAAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCTTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCa < 2:496572/149‑1 (MQ=255) cgcgcgGCCAGAGTCCAAT‑AATCATCGTCAAGAGGGAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCGGATGCGACGCGGTCGCGTCGTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTaa < 1:824876/149‑1 (MQ=37) gcgAGGTCAGAGTCCAAT‑AACAATAGTCGATATGTAGGCCGGGTCAGGCGTTCGCGCCGCAGCCTGCGACCGTGGGCGGATGCGACGGGGTCGCTTCTTATGATGCCTGCAGGGCGATGCCGATATGTACATCGTATTCGGCAATTAAt < 2:89222/149‑1 (MQ=255) gcgAGGCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAAt < 1:561763/149‑1 (MQ=255) ggCCAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACAt < 1:85606/149‑1 (MQ=255) gacAGAGTCCAAT‑AATCATCGTCGATAGTGAGGCCGGATATTGTGTTCTGTTCGCATGCGGAAACCGATGCCTGATGCGACGCTGTCGCGTCTGATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATa < 2:461440/147‑1 (MQ=25) accAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCGTGATGCGACGCGGCCGCTTCTTATCAGGCCTACAGGTCGTTGCCGATATGTACATCGTATACGGCAATTAATACATa > 2:927158/2‑149 (MQ=37) ccAGAGTCCAAT‑AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAg < 1:603626/149‑1 (MQ=255) | TTTGACCAGTGGGGAGTGGAGCTGGGAAAGCAGCTGGCTAAGAAAATAGAGCCTGAGCTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCATCAAGCAGCAGCGCGAGGCCAGAGTCCAATAAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATT > NC_000913_3_hsa_pgi/4235285‑4235577 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |