New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_pgi	= 1343176	20 (0.370)	3 (0.060)	3/258	NT	11.7%	coding (153/219 nt)	osmB	osmotically and stress inducible lipoprotein
	?	NC_000913_3_hsa_pgi	= 1343184	26 (0.510)					coding (145/219 nt)	osmB	osmotically and stress inducible lipoprotein

GTGCGTATTATTCAGTTATTTCGTACTGAACAGAATCAAGCGTATTATAATTGCGAGTCGATAATCGACATTTATTTACGATTATTTACCGACCTGGTGACCAATAACACCTCCGACAGCTGCACCACCTAATGTACCCAACGTACTGCCATCGGTCAGTACTGCACCGCCTAATGCCCCTGCACCCGCGCCGATTGCGGTGTTGCGGTCCCGTTTAGACCAGTTAGAACAGGCACTCAGAGACATTGCCAAAGTAATTGCCAGAACAGCCGCGGTCATTTTTTTGCTCGTTACA  >  NC_000913_3_hsa_pgi/1343029‑1343323                                                                                                                                                    |                                                                                                                                                    gtgCGCAGTATTCACTTATTTCGTACTGAACAGAATCAAGCTTATTATAATTGCGAGTCGATAATCGACATTTATTTACGATTATTTACCGACCTGGTGACCAATAACACCTCCGACAGCTGCACCACCTAATGTACCCAACGTACTGc                                                                                                                                                    <  2:783298/149‑1 (MQ=255)        ttattCAGTTATTTCGTACTGAACAGAATCAAGCGTATTATAATTGCGAGTCGATAATCGACATTTATTTACGATTATTTACCGACCTGGTGACCAATAACTCCTCCGACAGCTGCACCACCTAATGTACCCAACGTACTGacctatgg                                                                                                                                             <  2:380554‑M1/149‑9 (MQ=255)            tCAGTTATTTCGTACTGAACAGAATCAAGCGTAAAAAAATCAGGAGTCGATAATCGACATTTATTTACGATTATTTACCGACCTGGTGATCAATAACACCTCCGACAGCTGCACCACCTAATGTACCCAACGTACTGCCACCGGAcagt                                                                                                                                         <  2:925177‑M2/149‑5 (MQ=255)                                    tCAAGCGTATTATAATTGCGAGTCGATAATCGACATTTATTTACGATTATTTACCGACGTGGTGACCAATAACACCTCCGACAGCTGCACCACCTAATGTACCCAAGGTACTGCCATCGGTCAGTACTGCACCGCCTAATGCCCCTGCa                                                                                                                 >  2:687125/1‑149 (MQ=255)                                    tCAAGCGTATTATAATTGCGAGTCGATAATCGACATTTATTTACGATTATTTACCGACCTGGTGACCAATAACACCTCCGACAGCTGCACCACCTAATGTACCCAACGTACTGaccgatggcagtacgttgggtacattaggtggtgca                                                                                                                 >  1:318930‑M1/1‑113 (MQ=255)                                      aaGCGTATTATAATTGCGCGTCGATAATCGACATTTATTTACGATTATTTACCGACCTGGTGACCAATAACACCTCCGACAGCTGCACCACCTAATGTACCCAACATCCTCCCATCCGTCACTCCTGCACCTCCTAATGCCCCTGAAcc                                                                                                               >  2:440612/1‑149 (MQ=255)                                            attatAATTGCGAGTCGATAATCGACATTTATTTACGATTATTTACCGACCTGGTGACCAATAACACCTCCGACAGCTGCACCACCTAATGTACCCAACGTACTGaccgatggcagtacgttgggtacattaggtggtgcagctgtcgg                                                                                                         <  2:318930‑M1/149‑45 (MQ=255)                                                   ttGCGAGTCGATAATCGACATTTATTTACTATTATTTACCGACCGGGTGACCAATAACACCTCCGACAGCTGCACCACCTAATGTACCCAACGTACTGCCATCGGTCAGTACTGCACCGCCTAATGCCCCTGCACCCGCGCCGATTGCg                                                                                                  <  1:863014/149‑1 (MQ=255)                                                             aTAATCGACATTTATTTACGATTATTTACCGAACTGGTGACCAATAACACCTCCGAAAGCTGCACAACCTAATATACCCAACGAACTCCCATCAGTCAGTACTGCACCCACTAATGCCCCTGACCCCCCGCCGCTTTCGATGTTGCGGt                                                                                        >  2:445061/1‑149 (MQ=255)                                                                     cattcattTACGACGATTTACCGACCTGGTGACCAATAACACCTCCTACAGCTGCACCACCTAATGTACCCAACGTACTGCCATCGGTCAGTACTGCACCGCCTAATGCCCCTGCACCCGCGCCGATTGCGGTGTTGCGGTCCCGTTTa                                                                                <  2:696878/149‑1 (MQ=255)                                                                                   tattTACCGACCTCGTGACCAATAACACCTCCGACAGCTGCACCACCTAATGTACCCAACGTACTGCCATCGGTCAGTACTGCCCCGCCTAATGCCCCTGCACCCGCGCCGATTGCGGTGTTGCGGTCCCGTTTAGACCAGTTAGAACa                                                                  <  2:691769/149‑1 (MQ=255)                                                                                    attTACCGACCTGGTGACCAATAACACCTCCGACAGCTGCACCACCTAATGTACCCAACGTACTGCCATCGGTCAGTACTGCACCGCCTAATGCCCCTGCACCCGCGCCGATTGCGGTGTTGCGGTCCCGTTTAGACCAGTTAGAACAg                                                                 <  1:108755/149‑1 (MQ=255)                                                                                        acctacctGGTGACCAATAACACCTCCGAGAGCTGCACCACCTAATGTACCCAACGGACTGCCATCGGTCAGTACTGCACCGCCTAATGCCCCTGCACCCGCGCCGATTGCGGTGTTGCGGTCCCGTTTAGACCAGTTAGAACAGGCAc                                                             <  1:474277/149‑1 (MQ=255)                                                                                               gggTGACCCATAACACCTCCGACAGCTGCACCACCTAATGTACCCAACGTACTGCCATAGGTAAGTACTGCACCGCCTAATGCCCCTGCACCCGCGCCGATTGCGGTGTTGCGGTCCCGTTTAGACCAGTTAGAACAGGCACTCAgaga                                                      <  1:211410/148‑1 (MQ=255)                                                                                                    aCCAATAACACCTCCGACAGCTGCACCACCTAATGTACCAAACGTACTGCCATCGGTCAGTACTGCACCGCCTAATGCCCCTGCACCCGCGCCGATTGCGGTGTTTCGGTCCCGTTTAGACCAGTTAGAACAGGCACCCCGATACATTg                                                 >  2:403804/1‑149 (MQ=255)                                                                                                           acacCTCCGACAGCTGCACCACCTAATGTACCCAACGTACTGCCATCGGTCAGTACTGCACCGCCTAATGCCCCTGCACCCGCGCCGATTGCGGTGTTGCGGTCCCGTTTAGACCAGTTAGAACAGGCACTCAGAGACATTGCCAAAGt                                          >  1:41124/1‑149 (MQ=255)                                                                                                            cacCTCCGACAGCTGCACCACCTAATGTACCCAACGTACTGCCATCGGTCAGTACTGCACCGCCTAATGCCCCTGCACCCGCGCCGATTGCGGTGTTGCGGTCCCGTTTAGACCAGTTAGAACAGGCACTCAGAGACATTGCCAAAGTa                                         >  1:3075/1‑149 (MQ=255)                                                                                                             acCGCCGACAGCTGCCGCACCTAATGTCCCCAACGTACTGCCATAGGTCAGTACGGCACCGCCTAATGCCGCTGCACCCGCGCCGATTGCGGCGTTGCGGTCCCGTTTAGACCAGTTAGAACAGGCACTCAGAGACATTGCCAAAGTaa                                        <  2:419760/149‑1 (MQ=255)                                                                                                                 ccGACAGCTGCACCACCTAATGTACCCAACGTACTGCCATCGGTcagtacgttgggtacattaggtggtgcagctgtcggaggtgttattggtcaccaggtcggtaaataatcgtaaataaatgtcgattatcgactcgcaattataat                                    <  2:318930‑M2/149‑106 (MQ=255)                                                                                                                 cagACAGCTGCACCACCTAATGTACCCAACGTACTGCCATCGGTCAGTACTGCACCGCCTAATGCCCCTGCACCCGCGCCGATTGCGGTGTTGCGGTCCCGTTTAGACCAGTTAGAACAGGCACTCAGAGACATTGCCAAAGTAATTGc                                    >  2:318745/3‑149 (MQ=255)                                                                                                                  cGACAGCTGCACCACCTAATGTACCCAACGTACTGCCATCGGTCAGTACTGCACCGCCTAATGCCCCTGCACCCGCGCCGATTGCg                                                                                                  <  2:258519/86‑1 (MQ=255)                                                                                                                  cGACAGCTGCACCACCTAATGTACCCAACGTACTGCCATCGGTCAGTACTGCACCGCCTAATGCCCCTGCACCCGCGCCGATTGCg                                                                                                  >  1:258519/1‑86 (MQ=255)                                                                                                                   gACAGCTGCACCACCTAATGTACCCAACGTACTGCCATCGGTCAGTACTGCACCGCCTAATGCCCCTGCACCCGCGCCGATTGCGGTGTTGCGGTCCCGTTTAGACCAGTTAGACCACTCGCTCAGAGACATTGCCAAAGTAATTGCCa                                  <  1:745999/149‑1 (MQ=255)                                                                                                                         tGCACCACCTAATGTACCCAACGTACTGCCATCGGTcagtacgttgggtacattaggtggtgcagctgtcggaggtgttattggtcaccaggtcggtaaataatcgtaaataaatgtcgattatcgactcgcaattataatacgcttga                            >  1:318930‑M2/1‑36 (MQ=255)                                                                                                                              caccTAATGTACCCAACGTACAGCCATCGGTCAGTACTGCACCGCCTAATGCCCCTGCACCCGCGCCGATTGCGGTGTTGCGGTCCCGTTTAGACCAGTTAGAACAGGCACACAGAGACATTGCCAAAGTAATTGCCAGAACAGCcgcg                       >  1:290007/1‑149 (MQ=255)                                                                                                                                 cTAATGTACCCAACGTACTGCCATCGGTCAGTACTGCACCGCCTAATGCCCCTGCACCCGCGCCGATTGCGGTGTTGCGGTCCCGTTTAGACCAGTTAGAACAGGCACTCAGAGACATTGCCAAAGTAATTGCCAGAACAGCCGCGGTc                    >  1:622677/1‑149 (MQ=255)                                                                                                                                       tACCCAACGTACTGCCATCGGTCAGTACTGCACCGCCTAATGCCCCTGCACCCGCTCCGATTGCGGTGTTGCGGTCCCGTTTAGACCAGTTAGAACAGGCACTCAGAGGCATTGCCAAAGTAGTTCCCAGAACAGCCGCTGTCCttttt              >  1:790149/1‑149 (MQ=255)                                                                                                                                                 aCTGtccggtggcagtacgttgggtacattaggtggtgcagctgtcggaggtgttattgatcaccaggtcggtaaataatcgtaaataaatgtcgattatcgactcctgatttttttacgcttgattctgttcagtacgaaataactga    <  2:925177‑M1/149‑146 (MQ=255)                                                                                                                                                   tGCCATCGGTCAGTACTGCACCGCCTAATGCCAATCGGGACGCGCCGATTGCGGTGTTGCGGTCCCGTTTAGACCAGTTAGAACAGGCACTCAGAGACATTGCCAAAGTAATTGCCAGAACAGCCGCGGTCATTTTTTTGCTCGTTACa  >  1:993952/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                    GTGCGTATTATTCAGTTATTTCGTACTGAACAGAATCAAGCGTATTATAATTGCGAGTCGATAATCGACATTTATTTACGATTATTTACCGACCTGGTGACCAATAACACCTCCGACAGCTGCACCACCTAATGTACCCAACGTACTGCCATCGGTCAGTACTGCACCGCCTAATGCCCCTGCACCCGCGCCGATTGCGGTGTTGCGGTCCCGTTTAGACCAGTTAGAACAGGCACTCAGAGACATTGCCAAAGTAATTGCCAGAACAGCCGCGGTCATTTTTTTGCTCGTTACA  >  NC_000913_3_hsa_pgi/1343029‑1343323

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.