| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_pgi | 3583428 = | NA (NA) | 54 (0.820) | 42/286 | 0.7 | 90.0% | intergenic (+10/‑55) | yrhA/insA | pseudogene, interrupted by IS1E/IS1 repressor TnpA |
| ? | NC_000913_3_hsa_pgi | 3665150 = | 6 (0.090) | coding (661/825 nt) | gadX | acid resistance regulon transcriptional activator; autoactivator | |||||
Only 100 of 132 total aligned reads displayed.
GCAGAACGGTCAGTGCCGTAAAAATTCCCTTGCGCAACAATACTTGCCGCCGAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCATGTATAACAATAAGTTGCAAAGCACGTTGCATTCTACACTCAGTAAGCAACTGTGAATATGATGTCTCTTCTTCGCGCAATTTTTTCTTTAACAGACTTGG > NC_000913_3_hsa_pgi/3665005‑3665297 | gCAGAACGGTCAGTGCCGTAAAAATTCCCTTGCGCAACAATACTTGCCGCCGAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCt > 2:111660/1‑149 (MQ=255)gCAGAACGGTCAGTGCCGTAAAAATTCCCTTGCGCAACAATACTTGCCGCCGAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACAACACCCt > 2:111651/1‑149 (MQ=255)gCAGAACGATCAGTGCCGTAAAAATTCCCTTGCGCAACAATACTTGCCGCCGAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGCACTACGTAAATGAAATCCGACAAGCt > 2:87674/1‑149 (MQ=255) agcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCtgt < 1:777093‑M2/6‑1 (MQ=255) agcgctgaagtccggcggtgctttggccgttacgcaccaccccgtcaggagctgaacagcaggcacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCtgt < 2:1044208‑M2/6‑1 (MQ=255) aGAACGGTCAGTGCCGGAAAAATTCCCTTGCGCAACAATACTTGCCGCCGAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCtgt < 1:466816/149‑1 (MQ=255) cggatgtccggcggtgctttctccatcacgcaccacccctgcagtaggcgaacatgagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCGGTGata < 1:828853‑M2/10‑1 (MQ=255) cGGTCAGTGCCGTAAAAATTCCCTTGCGCAACAATACTTGCCGCCGAGTCGCGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATg > 2:396660‑M2/1‑148 (MQ=255) cGGTCAGTGCCGTAAAAATTCCCTTGCGCAACAATACTTGCCGCCGAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATg < 1:64651‑M2/149‑2 (MQ=255) tgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCTGTGATATCca < 1:315180‑M2/14‑1 (MQ=255) aGTGCCGTAAAAATTCCCTTGCGCAACAATACTTGCCGCCGAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACCCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaat > 2:271093‑M2/1‑143 (MQ=255) tccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaggccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcagcCGCTGTGATATCccca > 2:817854‑M2/134‑149 (MQ=255) tGCCGTAAAAATTCCGTTGAGAGTTTAGACTTGCCGTCGAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATATGACACGCTGTGATggtaatga > 2:1132236‑M2/1‑141 (MQ=255) tGCCGTAAAAATTCCCTTGCGCAACAATACTTGCCGCCGAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGCAAGACATAAATGAAAGACGACACGGTGTGATgggactga < 1:301610‑M2/149‑9 (MQ=255) tGCCGAAAAAATCCCCTTGCGCAACAATACTTGCCGCCGAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatga > 2:554394‑M2/1‑141 (MQ=255) gTAAAAGTTCCCGTTCGCAACATTACTTCCCGCCGAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactcc > 2:503818‑M2/1‑137 (MQ=255) gTAAAAATTCCCTTGCGCAACAATACTTGCCGCCGAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGc > 1:430362/1‑131 (MQ=255) aaaaaTTCCCTTGCGCAACAATACTTGCCGCCGAGTCACGGTTCGACAATCTCGGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaa < 1:609122‑M2/149‑15 (MQ=255) tttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCTGTGATATCCACAGGATACTGCAAc > 1:685420‑M2/122‑149 (MQ=255) ttCCCTTGCGCAACAATACTTGCCGCCGAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttat > 1:585342‑M2/1‑130 (MQ=255) cTTGCGCAACAATACTTGCCGCCGAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtactgactccaacttattcat < 2:429551‑M2/149‑24 (MQ=255) cTTGCGCAACAATACTTGCCGCCGAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCAGAATAATTCCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgat < 1:1062757‑M2/149‑24 (MQ=255) aacaaTACTTGCCGCCGAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaccttattgctattgttt < 2:323255‑M2/149‑31 (MQ=255) aacaaTACTTGCCGCCGAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacgtattgatagtgttt < 1:297263‑M2/149‑31 (MQ=255) acaaTACTTGCCGCCGAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtgtttt < 1:1073698‑M2/149‑32 (MQ=255) gccaccccgtcagtagcttaacaggagggacagctgagagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcgccCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGaa > 2:1001373‑M2/109‑149 (MQ=255) accaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCTGTGATATCca > 2:935871‑M2/109‑122 (MQ=255) accaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCTGTGATATCca < 1:935871‑M2/14‑1 (MQ=255) ccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGaaa < 2:1016609‑M2/42‑1 (MQ=255) aaCACTTGCCGCCGAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACGCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtgttttat > 1:587182‑M2/1‑116 (MQ=255) caccccgtcagtagctgaacaggagggacggctgataggaacaggagccagtggagcccctaaaaaacactatcatacactaaatcggtaagttggcagcatcaccCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTCaaaa > 1:958293‑M2/107‑149 (MQ=255) ttGCCGCCGAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtggtttattttcc < 2:632055‑M2/149‑39 (MQ=255) ttGCCGCCGAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatga < 1:716100‑M2/119‑9 (MQ=255) ttGCCGCCGAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatga > 2:716100‑M2/1‑111 (MQ=255) ccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCa > 1:481526‑M2/103‑149 (MQ=255) ccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCa < 1:343643‑M2/47‑1 (MQ=255) ccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCa < 1:736546‑M2/47‑1 (MQ=255) cgccgAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtgtt > 2:893326‑M2/1‑107 (MQ=255) cgccgAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtgtt < 1:893326‑M2/136‑30 (MQ=255) gccgAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCGGTGATggtaatgactccaacttattgatagtgttttatgttcagataa < 1:348832‑M2/149‑44 (MQ=255) ccaAGTCACGATTCGACAAGCTCTTCGCCGATCGCTCCTGATACTCTGTTGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtgttttatgttcagataat > 2:109789‑M2/1‑105 (MQ=255) cgAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtgttttatgttcagataatg < 2:441269‑M2/149‑46 (MQ=255) ggtAACGGTTCGACAATCTCTGCGCCGATCGCTTCTGATATTCTGTGTGCGTCATCCCATAATAATGTCGAAAGACGTAAATGAAATACTACACGCTGTGATggtactgactccaacttattgatagtgttttatgttcagataatgcc > 2:305851‑M2/2‑102 (MQ=255) aCGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATCATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagcattttatgttcacataatgcccgat < 2:605066‑M2/149‑52 (MQ=255) aCGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgat < 1:1030389‑M2/149‑52 (MQ=255) cGGTTCGACAATCTCTGCGCCGATCGCTCCTGATAAGCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatg < 2:813242‑M2/149‑53 (MQ=255) ggTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgc < 2:471265‑M2/149‑54 (MQ=255) ggTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatga > 2:827489‑M2/1‑96 (MQ=255) caggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACAATGTATAACAATAAGt > 1:648689‑M2/88‑149 (MQ=255) ttCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgact < 2:703156‑M2/149‑56 (MQ=255) ggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagtcggcagcatcaccCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCATGTATAACAATAAGTTg < 2:504594‑M2/64‑1 (MQ=255) gATCGCGCCGTAGACCCTTTTGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATgttaatgactccaacttattgatcgtgttttatgttcagataatgcccgattattttgtcatgcagctccacc > 2:29757‑M2/1‑76 (MQ=255) aTCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtgttttatgttcagat < 1:125987‑M2/116‑42 (MQ=255) aTCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtgttttatgttcagat > 2:125987‑M2/1‑75 (MQ=255) tCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcatctccaccgatttt < 2:766342‑M2/149‑80 (MQ=255) tCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt < 2:798680‑M2/149‑80 (MQ=255) gccacgtgagcacctcaaaaacaccatcatacaccaaatcagtaagttggcagcatcaccCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCATGTATAACAATAAGTTGCAAAGCACGTTGCATTCTACACTCa < 2:557512‑M2/89‑1 (MQ=255) ccTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttg > 2:639087‑M2/1‑69 (MQ=255) gATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgaga < 1:540708‑M2/149‑84 (MQ=255) actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCATGTATAACAATAAGTTGCAAAGCACGTTGCATTCTACACTCAATa > 2:502477‑M2/58‑149 (MQ=255) aTACTCTGTGGTCGTCATTCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaa > 2:201784‑M2/1‑65 (MQ=255) tctGTGGGCGTCGTCCCATAATAATTTCGAAAGACGTAAATGAACTACGACACGCTGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcgagataacattgtcattcaactccacccatgttgaacacgaa < 2:539934‑M2/149‑89 (MQ=255) tgtgGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtgtt > 1:1131373‑M2/1‑59 (MQ=255) caaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCATGTATAACAATAAGTTGCAAAGCACGTTGCATTCTACACTCAGTAAGCAACTGTGaa < 1:719400‑M2/104‑1 (MQ=255) caaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCATGTATAACAATAAGTTGCAAAGCACGTTGCATTCTACACTCAGTAAGCAACTGTGaa < 1:767043‑M2/104‑1 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCATGTATAACAATAAGTTGCAAAGCACGTTGCATTCTACACTCAGTAAGCAACTGTGAat > 2:1085685‑M2/45‑149 (MQ=255) cATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccg < 2:383954‑M2/149‑100 (MQ=255) aTCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaaggagtccaactgattgatagtgttttatgttcagataatgcccgatgactttgtcatgaagctccaccgattttgaaaacgacagcgacttccgt < 1:39257‑M2/149‑101 (MQ=255) aTCCCACAATAATTTCGAAAGACGTCAATGAAATACGACACGCTGTGATggtaatgactccaacgtattgatagtgttttacattcagataatgcccgatgactttgtcatgcagctccaccggttttgagaacgacagcgacttccgt > 1:1025716‑M2/1‑49 (MQ=255) ttccatAATAATTTCGAAATACGTAAATGAAATATGACCCGATGCGTTtatgacgactcctacttattgatagtgttttctgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtc > 1:87674‑M2/3‑48 (MQ=255) accatcatacactaaatcagtaagttggcagcatcaccCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCATGTATAACAATAAGTTGCAAAGCACGTTGCATTCTACACTCAGTAAGCAACTGTGAATatgatg > 1:195257‑M2/39‑149 (MQ=255) tcatcgtacactaaatcagtaagtgtgcagcatcaccTGCTGGGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCATGTATAACAATAAGTTTCAAAGCACGTTGCATTCTACAGTCAGTAATCAACTGAAAATAGGATGt < 2:249553‑M2/112‑1 (MQ=255) ccATAATAGTTGAGAAAGACGTAAATGAAATACGACACGCGGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcctccgattttgagaacgacagcgacttccgtccc > 2:131756‑M2/1‑46 (MQ=255) tacactaaatcagtaagtgggcagcatcaccCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCATGTATAACAATAAGTTGCAAAGCACGTTGCATTCTACACTCAGTAAGCAACTGTGAATATGATGTCtcttc < 2:685420‑M2/118‑1 (MQ=255) aatTTCGAAAGACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtg < 2:434194‑M2/149‑111 (MQ=255) taaatcagtaagttggcagcatcaccCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCATGTATAACAATAAGTTGCAAAGCACGTTGCATTCTACACTCAGTAAGCAACTGTGAATATGATGTCTCTTCTTcgc < 1:1029498‑M2/123‑1 (MQ=255) taaatcagtaagttggcagcatcaccCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCATGTATAACAATAAGTTGCAAAGCACGTTGCATTCTACACTCAGTAAGCAACTGTGAATATGATGTCTCTTCTTcgc < 2:750575‑M2/123‑1 (MQ=255) gACGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccggttttgagaacgacagcgacttccgtcccagccgtgccaggtgctg < 1:153056‑M2/149‑121 (MQ=255) aCGTAAATGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgc > 2:348832‑M2/1‑28 (MQ=255) taagttggcagcatcaccCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCATGTATAACAATAAGTTGCAAAGCACGTTGCATTCTACACTCAGTAAGCAACTGTGAATATGATGTCTCTTCTTCGCGCAAtttt > 2:916381‑M2/19‑149 (MQ=255) gTAAATGAAATACGACACGCTATGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagctacttcagtcccagccttgccaggtgctgccc < 2:276863‑M2/149‑124 (MQ=255) ttcggcagcatcaccCGTGGTGATAGCCACAGGATACTGCAACTCGTTTAATTGAAAAACCATGTATAACAATAAGTTGCAAAGCACGTTGCATTCTACACTCAGTAAGCAACTGTGAATATGATGTCTCTTCTTCGCGCAATTTTTTc < 2:242040‑M2/134‑1 (MQ=255) gttgcgcgcatccccCGATGTACTATCCCCAGGTTACTGCATCTCTTTTAATTGAAAAACCATGTATAACAATACGTTGCAAAGCACGTTGCATTCTCCACTCAGTTAGCAACTGTGAATATGATGTCTCTTCTTCGCGCAATTTTTTc < 1:518120‑M2/134‑1 (MQ=255) aTGAAATACGACACGCTGTGATggtaatgactccaacttatttatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcaga > 2:609122‑M2/1‑22 (MQ=255) aTGAAATACGACACGCTGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcaga > 1:434194‑M2/1‑22 (MQ=255) ggcagcatcaccCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCATGTATAACAATAAGTTGCAAAGCACGTTGCATTCTACACTCAGTAAGCACCTGTGAATATGATGTCTCTTCTTCGCGCAATTTTTTCttt > 1:209608‑M2/13‑149 (MQ=255) cagcatcaccCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCATGTATAACAATAAGTTGCAAAGCACGTTGCATTCTACACTCAGTAAGCAACTGTGAATATGATGTCTCTTCTTCGCGCAATTTTTTCTTTaa < 1:681254‑M2/139‑1 (MQ=255) aTACGACACGCTGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcag > 1:111660‑M2/1‑17 (MQ=255) tACGACACGCTGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcagg > 1:798680‑M2/1‑16 (MQ=255) tACGACACGCTGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcagg > 2:1056088‑M2/1‑16 (MQ=255) atcaccCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCATGTATAACAATAAGTTGCAAAGCACGTTGCATTCTACACTCAGTAAGCAACTGTGAATATGATGTCTCTTCTTCGCGCAATTTTTTCTTTAACAGa > 1:679936‑M2/7‑149 (MQ=255) aagacACGCTGTGATggtaatgaatccaacttattgatggtgttttatgttcagataatccccgatgactttgtcatgcagctcccccgattttgagaacgacagcgacttccgtcccagccgtgcctggtgctgcctcagattcaggt > 2:102579‑M2/3‑15 (MQ=255) caccCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCATGTATAACAATAAGTTGCAAAGCACGTTGCATTCTACACTCAGTAAGCAACTGTGAATATGATGTCTCTTCTTCGCGCAATTTTTTCTTTaa < 1:883925‑M2/139‑1 (MQ=255) caccCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCATGTATAACAATAAGTTGCAAAGCACGTTGCATTCTACACTCAGTAAGCAACTGTGAATATGATGTCTCTTCTTCGCGCAATTTTTTCTTTaa > 2:883925‑M2/5‑143 (MQ=255) caccCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCATGTATAACAATAAGTTGCAAAGCACGTTGCATTCTACACTCAGTAAGCAACTGTGAATATGATGTCTCTTCTTCGCGCAATTTTTTCTTTAACAGACt > 2:1038090‑M2/5‑149 (MQ=255) accCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCATGTATAACAATAAGTTGCAAAGCACGTTGCATTCTACACTCAGTAAGCAACTGTGAATATGATGTCTCTTCTTCGCGCAATTTTTTCTTTAACAGACtt > 1:1108159‑M2/4‑149 (MQ=255) accCGCTGTGATATCCACAGGATACTGCAACTCGCTCAATTGAAAAACCATGTATAACAATAAGTTGCAAAGCACGTTGCATTCTACACTCAGTATGCAACTGTGAATATGAGGTCGCTTCATCGCGCAATTTTTTCTTTAACAGACtt < 2:943790‑M2/146‑1 (MQ=255) ccCGCTGTCATATCCACAGGATACTGCAACTCCCTTAATTGAAAAACCATGTATAACAATAAGTTGCAAAGCACGTTGCATTCTACTCGCAGTAAGCAACTGTGAATATGATGTCTCTTCTTCGCGCAATTTTTTCTTTAACAGACTTg < 1:502477‑M2/147‑1 (MQ=255) cCGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCATGTATAACAATAAGTTGCAAAGCACGTTGCATTCTACACTCAGTAAGCAACTGTGAATATGATGTCTCTTCTTCGCGCAATTTTTTCTTTAACAGACTTgg > 1:65199‑M2/2‑149 (MQ=255) acGCTGTGATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgactttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgc < 1:1054953‑M2/149‑140 (MQ=255) | GCAGAACGGTCAGTGCCGTAAAAATTCCCTTGCGCAACAATACTTGCCGCCGAGTCACGGTTCGACAATCTCTGCGCCGATCGCTCCTGATACTCTGTGGGCGTCATCCCATAATAATTTCGAAAGACGTAAATGAAATACGACACGCTGTGATATCCACAGGATACTGCAACTCGCTTAATTGAAAAACCATGTATAACAATAAGTTGCAAAGCACGTTGCATTCTACACTCAGTAAGCAACTGTGAATATGATGTCTCTTCTTCGCGCAATTTTTTCTTTAACAGACTTGG > NC_000913_3_hsa_pgi/3665005‑3665297 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |