| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_hsa_pgi | 4,296,088 | 0 | C | T | 24.4% | 106.0 / 43.3 | 83 | intergenic (+266/+376) | gltP/yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| Reads supporting (aligned to +/- strand): ref base C (33/29); new base T (8/12); total (42/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.59e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCC > NC_000913_3_hsa_pgi/4295941‑4296235 | ccGGATAAGGCGTTTATGCCGCATCCGCCAGCAACGCCTGATGCGACGCGTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACg < 1:913565/148‑1 (MQ=12) gATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCt > 1:687085/1‑149 (MQ=32) gATAAGGCGTTTATGCCGCAGCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCt > 1:1129404/1‑149 (MQ=17) aTAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACCGCGCAATAGCCTGATTTAGCGTGCTTTTGTAGGTCGGACAAGGCGATCGCACCGCCTCCGACACCAACGcgag > 2:125631/1‑146 (MQ=11) aaGGGGTTTATGCCCCATCCGGCATCAACGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGAt < 1:540501/149‑1 (MQ=11) ggCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGc > 2:242468/1‑149 (MQ=17) ttATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGc < 2:259539/149‑1 (MQ=17) cGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTCCGCCGCATCCGACATCAATGCCTGCTGCGACGCTTGC‑cg > 2:370759/1‑149 (MQ=255) aTCCGACATCCACGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACGCCAGACAGCGCAATAGCATGATTGACCGTGATCTGCTAGGTCGTATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGt < 1:836669/149‑1 (MQ=11) cGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGC‑CGCGTCtt < 1:201360/149‑1 (MQ=25) gACATCAACGCCTGATGCGATGCTTAACGCGTCTGATCAGGCCTACGCCAGACAGTGCAATAGCCTGATTTAGCGTGATTTTGCAGGTAGGATAAGGCGTTTACACAGAATCCGACATCAACGCCTGATGCGACGCGCGC‑AGCGTCTTa > 2:897168/1‑149 (MQ=11) gACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTa > 1:939985/1‑149 (MQ=38) aCATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGCTTTAGCGTGATTTTGTATGTCGGATAGGGCGGTTACGCCGCATCCGACATCAGTGCCTTATGCGACGCTTGA‑CTCGCCTTAt > 2:347548/1‑149 (MQ=11) aTCAACGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATCGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGC‑CGCGTCTTATCa < 1:227461/149‑1 (MQ=255) aTCAACGCCTGATGCGACGCTTAACGCGTTTTATCAGGCCTACGCCAGACAGCGAAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATct < 2:860035/149‑2 (MQ=255) aTCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGC‑CGCGTCTTATCa < 1:242468/149‑1 (MQ=21) cAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGC‑CGCGTCTTATCAgg < 1:309791/149‑1 (MQ=21) aaCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTAGGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCTTGATGCGACGCTTGC‑CGCGTCTTGTCAGGc > 1:557771/1‑149 (MQ=255) aaCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGc > 2:852150/1‑149 (MQ=21) aaCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGc < 1:207436/149‑1 (MQ=39) cGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCt > 2:1085491/1‑149 (MQ=38) gCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGCTGCGACTCTTGC‑CGCGTCTTATCAGCCCTa > 1:14705/1‑149 (MQ=255) cTGATAAGACGCGTTAAGCGTCGCATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTat < 2:356850/148‑2 (MQ=11) gATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTatctt > 1:950676/1‑145 (MQ=9) cGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAAGGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGAc > 1:661268/1‑149 (MQ=38) tgaCGTGTCTTATCAGGCGTAAGGCATACAGAGAAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCaa < 2:262105/147‑1 (MQ=11) gcgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCtt > 1:546141/1‑110 (MQ=32) gTCTTATCAGGCCTACGCCAGACAGCGTAATAGCCCAATTTCGCTTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCACCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCt < 2:1050041/149‑1 (MQ=11) aTCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCACCCAGCGCATGATCCTCAttt > 2:349741/1‑149 (MQ=11) aTCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAAc < 2:149793/87‑1 (MQ=35) tCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGcc > 2:245376/1‑89 (MQ=35) tCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGcc < 1:245376/89‑1 (MQ=35) aGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGcc < 1:707656/87‑1 (MQ=25) aCGCCATACAGCGCAATAGCCTAATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAtt < 1:106904/149‑1 (MQ=255) ccAGACAGCGCAAAAGCCTGATTTAGAGTGATTTTGTAGGTCGGATAAGGGGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATATAGCGTGATTTTg > 1:929191/1‑149 (MQ=255) cAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTg < 1:1069981/91‑1 (MQ=35) aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTa < 1:765078/149‑1 (MQ=39) gtgaGCGCAAGATCGGGATTTAGCGTGATTGTGTAGGTCGGATGAGGCGTTTAGGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAg < 2:25949/146‑1 (MQ=11) ggcgcAATAGCCTGATTTCGGGTGATTTTGTAGAGCGGATAAGGGGTTTACGCCGCACACGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTc < 2:564026/148‑1 (MQ=11) agagcAATAGCCGGATTTAGCGTGATTTTGTTGGTCGGATAAGGCGTTTAACCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCGTAGTTTAGCTTGATTTTGTAgtgc < 2:537088/146‑4 (MQ=11) aGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCGAGACATCGCAATAGCCTGCTTTAGCGTGATTTTGTAGGTc > 1:907396/1‑149 (MQ=255) gcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGAc < 1:523420/78‑1 (MQ=255) cAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGC‑CGCGt < 1:901273/88‑1 (MQ=255) cAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGt > 2:901273/1‑88 (MQ=255) cAATAGCCTGATTTAGCGCGATTTTGTACCTCGGATAAGGCGCTTACGCCGCATCCGACATCAGCCCCTGATGGGAGGCTCGC‑CGCGTCTTATCAGGCCTACAGTAGCCAGCGCACTAGCGTTCTTTCTCTTGATTTTGTCGGGCGGAt > 2:269872/1‑149 (MQ=19) aGCCTGATTTAGCGTGATTTTGTAGGTCGGACAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAgg < 1:459700/149‑1 (MQ=38) ccTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGcc < 1:316551/62‑1 (MQ=255) ccTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGcc > 2:316551/1‑62 (MQ=37) ccTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCACAAAAGCCTGGTTTAGCGCGATTTAGTACGCCGGATAAGCCg > 2:446050/1‑149 (MQ=11) tttAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGa < 1:388427/60‑1 (MQ=255) tttAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGa > 2:388427/1‑60 (MQ=35) gTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCa > 2:828733/1‑149 (MQ=38) gTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGCGAGATAAGGCGCTTCAGCCGCa > 2:718820/1‑149 (MQ=11) tGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGc > 1:138612/1‑80 (MQ=25) tGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGc < 2:138612/80‑1 (MQ=255) ttttGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAg < 2:322163/75‑1 (MQ=255) ttGTAGGTCGGACAAGGCGTTTCCGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGAc < 1:768859/149‑1 (MQ=255) gTAGGTCGGATAGGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACAt < 1:692270/149‑1 (MQ=38) atgTCGGATGCGGCGTAAACGCCTTATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAg > 2:675178/3‑115 (MQ=14) atgTCGGATGCGGCGTAAACGCCTTATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAg < 1:675178/113‑1 (MQ=14) ggTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCaa > 1:86136/1‑149 (MQ=38) gTCGTAGAAGGTGTTTACGCCGCATCGGACATCAACGCCGGATGAG‑CTGTAGCACTCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCTTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAAc < 1:783806/149‑1 (MQ=11) gTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGc < 2:312711/101‑1 (MQ=255) gTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGc > 1:312711/1‑101 (MQ=255) gTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTc > 1:757210/1‑116 (MQ=40) ctCGGATAAGGCGTTTACGCCGCATCCGACATCAACTCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTAATCTTGTAGGTCAGATAAGGCTTTTATGCCGCATCCGACATCaat < 1:897168/148‑2 (MQ=11) aTAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAACCAGCGCAATAGCCTGATTTATCGTCATTTTGTAGGTCAGATAAGGCCTTTCTGCTCCATTCGACACCGACCCCTg > 2:665987/1‑149 (MQ=11) cagggggTTTAGGCCTCATCCGACGTCGACGCGTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGa < 2:543392/143‑1 (MQ=11) aaGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGAt > 1:122820/1‑149 (MQ=37) gggCGTGTACGCCGCATCCGACATGAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATg < 2:267458/148‑1 (MQ=255) ggCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGc > 2:910926/1‑149 (MQ=39) gCGTTTACGCCGCATCCGACATCACCGACTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGAGATCAACGCCTGATGCg > 1:843633/1‑149 (MQ=255) cgccgcATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTa > 1:642789/1‑149 (MQ=37) gccgcATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCg > 1:359355/1‑99 (MQ=39) ccgcgaccGACATCAACGTCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTTGTGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAAc < 2:929191/143‑1 (MQ=11) gcATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCCCATCCGACATCAACCCCGAATGCGACCCTTACcgc > 2:486481/1‑149 (MQ=11) atcctgcATAAACGCGTGGTGTGACGTTGGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGCATAAGGCGTTTATCCCTCATCCGACATCAACGCCTGATGCGACGCTTAACGCGt < 1:20791/143‑1 (MQ=11) tCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTc > 2:460404/1‑149 (MQ=35) cGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCtt < 1:446050/149‑1 (MQ=35) gACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGc > 2:141479/1‑74 (MQ=39) aaCGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATaa < 1:151068/89‑1 (MQ=33) aaCGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGc < 2:86136/149‑1 (MQ=32) aaCGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTAAGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATGAGGc > 2:1069388/1‑149 (MQ=17) aCGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTACCGCGTCTTATCAGGcc > 1:925550/1‑149 (MQ=14) | TCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGC‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCC > NC_000913_3_hsa_pgi/4295941‑4296235 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |