New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_KO_pgi	2662491 =	73 (0.890)	9 (0.120)	8/264	8.8	11.5%	noncoding (183/266 nt)	REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences	REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences
	?	NC_000913_3_KO_pgi	2662521 =	69 (0.880)					noncoding (213/266 nt)	REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences	REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGG  >  NC_000913_3_KO_pgi/2662345‑2662640                                                                                                                                                   |                                                                                                                                                      ttCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCAGATGCGGCGTGAACGCCTTATCCGACCTACGGTGGTACTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACCGCTGTCg                                                                                                                                                    >  1:713979/1‑150 (MQ=11)      tACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAAGGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGGGGCTGCGCGTGACGCGTCGGATCAGGCAACGGGTGTCGGATgg                                                                                                                                               >  1:407766/1‑149 (MQ=11)      tACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTGTGTTCACTGTCGGCCTGATAAGACGCATTCCCCGTCTCTTCAGGCAACGGCTGTTGAATgc                                                                                                                                               >  2:106638/1‑150 (MQ=11)       tctcTGTAGTCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGCCGCGTGTTGGTTCGCATCAGGCAACGGCTGTCGGATgcg                                                                                                                                              <  1:357337/147‑1 (MQ=11)           tGTAGGCCTGATTGGCCGCATTACTCGTCGCATCAGGCAACGGCTTTCTGTTTCGGCGTGAACGCCTTATCCGACCTGCGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGt                                                                                                                                          <  2:526413/150‑1 (MQ=14)           tGTAGGCCTCATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGt                                                                                                                                          <  1:597217/150‑1 (MQ=255)                  cTGATAAGACGCATTACGCGTCGCAGCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGcc                                                                                                                                   <  2:762341/150‑1 (MQ=255)                   tgatgcgACGCGTAATGCGTCTTATCACGCAACGGCTGTCGGATGCGGCGTGAACGCCTTTTCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCCTTCGGATGGCGCGTGCACGccc                                                                                                                                  >  2:783676/7‑149 (MQ=11)                   ggATAAGCTGCATTACGCGTCGCATCAGGGAACGGGGGTCGGATGTGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCt                                                                                                                                  <  2:84603/149‑1 (MQ=14)                    gagccgACGCGTAATGCGTCTGATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCtt                                                                                                                                 <  2:1383992/145‑1 (MQ=14)                      tAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTAt                                                                                                                               <  2:955592/150‑1 (MQ=255)                        aGACTCATTACGTGTCGCATCAGGCAACGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTGCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATcc                                                                                                                             <  1:1250191/150‑1 (MQ=255)                          ccGCATTACGCTGCGCGTCAGGGAATGGCTGTCGGATGCGGCGTGCACGTCGTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGa                                                                                                                           <  2:235874/149‑1 (MQ=17)                            gCATTACGCGTCGCACCAGGCAACGTCTGTCGGAGGCGGCGCGAACGCCGTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGAcc                                                                                                                         <  2:1066110/150‑1 (MQ=17)                              aTTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGTACCCCTTTTCCGCCCtc                                                                                                                       >  2:1411770/1‑149 (MQ=255)                               atccgccTCGCAGCTGGCAACGTCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTAc                                                                                                                      <  2:1369998/147‑1 (MQ=17)                                tgcgcgTCGCATGTGGGAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGTCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACg                                                                                                                     <  2:1078072/148‑1 (MQ=255)                                  cgcgTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGt                                                                                                                   <  1:1360532/150‑1 (MQ=255)                                  cgccgcGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGt                                                                                                                   <  1:646998/145‑1 (MQ=255)                                     cggggctCAGGTAACGGCTGTCGGATGCGGCGGGAACGCCTTAGCCGACCTGGGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCt                                                                                                                <  2:333772/144‑1 (MQ=14)                                      gcGCAGCCGGCAACGGTTGTCGGATGCGGCGTGAACGCCTTATCCGCCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTg                                                                                                               <  2:841072/149‑1 (MQ=255)                                          aTCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAAc                                                                                                                                      >  2:656666/1‑123 (MQ=255)                                          aTCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAAc                                                                                                                                      <  1:656666/123‑1 (MQ=255)                                          aTCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACCCCTTATCCGACCTACGGTTCTGTTCa                                                                                                           >  1:71412/1‑150 (MQ=255)                                           tCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTTAACGCCTTATCCGACCTACGGTTCTGTTCAc                                                                                                          >  1:1361495/1‑150 (MQ=255)                                                cAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAg                                                                                                     <  2:381138/150‑1 (MQ=255)                                                 aaCGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTc                                                                                                                 >  1:115767/1‑137 (MQ=255)                                                 aaCGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTc                                                                                                                 <  2:115767/137‑1 (MQ=255)                                                    ggCTTTCGGATGCGGCGTGAACGCCTTAGCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCt                                                                                                 <  2:641225/150‑1 (MQ=255)                                                    ggCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCt                                                                                                 >  1:743326/1‑150 (MQ=255)                                                      ttGTCGGAGGCGGCGTGAACGGCTTATCCGACCTAGGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGa                                                                                               <  2:213739/149‑1 (MQ=255)                                                              tGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGc                                                                                       <  1:1202675/150‑1 (MQ=255)                                                                 ggcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTAGCATCAGGCAACGGCTGTCGGATGCGGCGAGAACGCCTTTTCCGCCGTACAATTCTGTTCACTGTCGGCCTGATAAGACGCAtt                                                                                    >  2:336019/1‑150 (MQ=14)                                                                     ggAACGCCTTATCCGACCTAGGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTAcgc                                                                                <  2:615115/149‑1 (MQ=37)                                                                           ccTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCa                                                                          >  1:543957/1‑150 (MQ=255)                                                                             ttATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATc                                                                        <  2:434700/150‑1 (MQ=40)                                                                               aTCCGACCTGCGGTTCTGTTAACTGTAGGCCTGATAAGACGCATTAGGCGTCGAATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAg                                                                      <  2:589653/150‑1 (MQ=255)                                                                                tCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGtt                                                                                                             <  2:913920/110‑1 (MQ=255)                                                                                tCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGtt                                                                                                             >  1:913920/1‑110 (MQ=255)                                                                                   gACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGcga                                                                  >  1:179320/1‑148 (MQ=38)                                                                                    gccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATACGACGCATTACGCGTCGCATCAGGCAAc                                                                 <  2:1427747/149‑1 (MQ=25)                                                                                         cGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATgcggcg                                                                                                                                           <  1:50449/71‑1 (MQ=35)                                                                                         cGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATgcggcg                                                                                                                                           >  2:50449/1‑71 (MQ=38)                                                                                              cTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTAtt                                                       <  2:371925/150‑1 (MQ=35)                                                                                                gtccaaggTAGGCCTGATAAGACGCCTTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCg                                                     <  1:627571/143‑1 (MQ=255)                                                                                                gTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCATGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACgg                                                                                                                    <  2:978125/87‑1 (MQ=18)                                                                                                gTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACgg                                                                                                                    >  1:978125/1‑87 (MQ=33)                                                                                                gTTCACTGTAGGCCTGATAAGACGCAGTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAATACGCATTACGTGGCTCATCAGGCAACCGCTGTTAATCg                                                     >  2:756593/1‑150 (MQ=11)                                                                                                    aCTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCt                                                 <  2:873024/150‑1 (MQ=38)                                                                                                    aCTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGCTCTGTTCACTGTAAGCCTGACAAGACGCATTACGCGTCGCATCAGGCAACGGCCGTTATTCAGCCt                                                 >  2:868617/1‑150 (MQ=11)                                                                                                        tAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCCTGtt                                             >  1:937049/1‑150 (MQ=255)                                                                                                        tAGGCCTGACAAGACGCATTATGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTTAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGACAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGtt                                             <  1:547446/150‑1 (MQ=255)                                                                                                           gCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTTTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTAcc                                          <  1:783676/150‑1 (MQ=255)                                                                                                           gCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTAcc                                          >  2:543692/1‑150 (MQ=255)                                                                                                           gCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTAAGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTAca                                          >  1:1421689/1‑149 (MQ=255)                                                                                                            catGATATGGCGCATTACGTGTCGCTTCAGGGACGGGCTGTCGGATGCGGCTTGAACGCCTTATCCGCCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCt                                         <  2:417259/148‑1 (MQ=14)                                                                                                             cTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCATTATCCGACCTACGGTTCTGTTCACTGTAGCCCTCATAAGACGCATTGCCCGTCGCCTCAGGCAACGCCTGTTATTCCGCCCTTTTACttt                                        >  2:168679/1‑150 (MQ=11)                                                                                                               gATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTa                                      <  1:868617/150‑1 (MQ=255)                                                                                                                   aGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTct                                  >  1:93076/1‑150 (MQ=255)                                                                                                                    gACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGCCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctg                                 <  2:1337338/150‑1 (MQ=255)                                                                                                                      cGCATTACGCGGCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctgct                               <  1:270733/150‑1 (MQ=255)                                                                                                                       gCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGAAGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctgctt                              >  1:951508/1‑149 (MQ=255)                                                                                                                       gCATTACGCGTCGCATCAGGCAACGCCTGTAGGATGCGGCGTGCACGCCTTATCCGCCCTACGGTTCTGTTCACTGTATGCCTGATAAGACGCATTACGCGTCGCATCAGCCAACAGCTGTTATTCGGCCTTATTACCTTTATTctgctt                              >  2:375153/1‑149 (MQ=17)                                                                                                                         aTTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTgctgct                            >  2:1360849/1‑150 (MQ=255)                                                                                                                            aCGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCaa                         >  1:975748/1‑150 (MQ=255)                                                                                                                                gTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGa                     >  1:793351/1‑150 (MQ=255)                                                                                                                                     ctCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCAGAACAGCTCTTGTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCa                <  1:851063/149‑1 (MQ=18)                                                                                                                                     aTCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCa                >  2:80547/1‑150 (MQ=255)                                                                                                                                     aTCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCa                >  2:860496/1‑150 (MQ=255)                                                                                                                                        aGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATa                       >  1:244418/1‑140 (MQ=255)                                                                                                                                        aGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATa                       <  2:244418/140‑1 (MQ=255)                                                                                                                                        aGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGaa             <  1:742874/150‑1 (MQ=255)                                                                                                                                             aCGGCTGTCGGATGCGGCGTGAACGCCTTATCCGCCCTACGTTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCcg        <  1:526342/150‑1 (MQ=255)                                                                                                                                                   gTCGGATAAGGCGTTCACGCCGCATCCGCCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTAACTTTATTCTGGTGCTCAATAGAAGCCAGAATCCCGCGCAgg  >  1:309903/1‑150 (MQ=21)                                                                                                                                                   |                                                                                                                                                      TTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGG  >  NC_000913_3_KO_pgi/2662345‑2662640

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.