New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_KO_pgi 2219625 =NA (NA)5 (0.100) 5/272 6.7 6.7% noncoding (1/34 nt) REP152 (repetitive extragenic palindromic) element; contains 1 REP sequences REP152 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913_3_KO_pgi 3114542 = 70 (1.450)noncoding (165/168 nt) REP219 (repetitive extragenic palindromic) element; contains 3 REP sequences REP219 (repetitive extragenic palindromic) element; contains 3 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AACGCCTTATCCGTCCTACGGGTGTCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATCGAGTGACGCGAGCGTGTTGTAAGCCGACTGGCTCACACCGCCCTCGAAGCTCATCTCGCTCGCCCC  >  NC_000913_3_KO_pgi/3114394‑3114687
                                                                                                                                                     |                                                                                                                                                 
aaCGCCTTATCCGTCCTACGGGTGTCTGCCAGCGCAAATAATAGCGACATTCCCAGTATGTAGGGCCGATAAGCAAGGGCATCGGGCAAATTTGGTAACCCGGTGCGCCTTCTTTCCTGCCAGATGACGGCGACAACCCTTATCCCGcc                                                                                                                                                   >  2:264670/1‑149 (MQ=255)
 aCGCCTTATCCGTCCTACGGGTGTCTGCCTGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCt                                                                                                                                                  >  1:765979/1‑149 (MQ=255)
      ttATCCGTCCTACGGGTGTCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGAGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGCTGCGGCGCGCGCGCCTTATCCGTCCTACggg                                                                                                                                             >  2:392028/1‑149 (MQ=255)
       tATCCGTCCTACGGGTGTCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGc                                                                                                                                            <  2:407782/149‑1 (MQ=255)
         tCCGTCCTACGGGTGTCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCtt                                                                                                                                          >  1:466062/1‑149 (MQ=255)
          ccGTCCTACGGGTGTCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTa                                                                                                                                         <  2:448366/149‑1 (MQ=255)
            gTCCTACGGGTGTCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCATTAGTTCATGCCTGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACt                                                                                                                                       >  1:748800/1‑149 (MQ=255)
                tACGGGTGTCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCGCGTAAGAAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTCCTGGGc                                                                                                                                   >  2:829419/1‑149 (MQ=39)
                tACGGGTGTCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGc                                                                                                                                   >  1:600697/1‑149 (MQ=255)
                 aCGGGTGTCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCa                                                                                                                                  <  2:508311/149‑1 (MQ=255)
                    ggTGTCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGAc                                                                                                                               <  2:659993/149‑1 (MQ=255)
                    ggTGTCTGCCAGCCCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGAc                                                                                                                               <  2:661848/149‑1 (MQ=255)
                    ggTGTCTGCAAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGTGCCTTATCCGGCCTACGGGCTTACTCGGCAGAc                                                                                                                               <  1:182839/149‑1 (MQ=255)
                     gtgtCTGCCAGCGCAAATGATCGCGGCTTTGCGCGTCTGTAGGCCCGATAAGCAGGCGCGTCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTCCGGGCTTACCGGGCAGACa                                                                                                                              >  2:135198/1‑149 (MQ=39)
                     gtgtCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACa                                                                                                                              >  2:706457/1‑149 (MQ=255)
                            tccgcgcAAAACATCGCGGTGTGCCTCGGCGGAAGGCCCGAACAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCAGGCCGGATGCGGCGCGAGCGCCTTAGCCGGTCTACGGGCTTACTCGGCAGACATCTTATg                                                                                                                       <  2:289508/146‑1 (MQ=255)
                            gcAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATg                                                                                                                       <  1:235178/148‑1 (MQ=255)
                              aGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCt                                                                                                                     >  1:122333/1‑149 (MQ=255)
                                cgcAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCg                                                                                                                   <  1:560355/149‑1 (MQ=255)
                                     ataatCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTGACCCGGTGCGCCTGATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAAc                                                                                                              >  2:501833/1‑149 (MQ=255)
                                         tCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGa                                                                                                          <  1:499449/149‑1 (MQ=255)
                                             ggCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTaa                                                                                                      <  1:747107/149‑1 (MQ=255)
                                              gCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAAt                                                                                                     >  1:652399/1‑149 (MQ=255)
                                              gCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAAt                                                                                                     <  1:743414/149‑1 (MQ=255)
                                               cTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCTCCTTATCCGGCCTACGGGCTTACTCGGCAGAGATCTTGTGCTCGGTAATCTGATTAATg                                                                                                    <  2:308257/149‑1 (MQ=255)
                                                tttCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATgg                                                                                                   >  2:602043/1‑149 (MQ=255)
                                                    cccGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTc                                                                                               >  2:747140/1‑149 (MQ=255)
                                                      cGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCg                                                                                             >  1:366486/1‑149 (MQ=255)
                                                      cGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCg                                                                                             <  2:600697/149‑1 (MQ=255)
                                                        tCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGt                                                                                           <  2:773210/149‑1 (MQ=255)
                                                         gcagacgCCCGAGAAGCATGCGCATCGGGCAAATGTGTTAATCCGGTGCCCCTTATTGCATGCCCGATGCGGCGCGAGCGCCTTATCCGGCCTACGCGCTTACTCGGCAGACATCGTACGCTCGGTAACCTGATTAATGGCTTCCGGTc                                                                                          <  2:567980/143‑1 (MQ=255)
                                                         cTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTc                                                                                          <  2:567367/149‑1 (MQ=255)
                                                         cTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTc                                                                                          <  2:342485/149‑1 (MQ=255)
                                                          tGTCGGCCCGATAAGTCGGCGCATGGAGGCAATGTGTTCACACTGTCATCCTTATTTGATGCCGGATGATGTGCGTGCGCGTTATCCTGTCCACTGTCTTACTTGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTcc                                                                                         <  2:666707/149‑1 (MQ=255)
                                                          tGTAGGCCCGATAAGCAGGGGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTcc                                                                                         <  2:277834/149‑1 (MQ=255)
                                                                cccGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTc                                                                                   <  1:378467/149‑1 (MQ=255)
                                                                 ccagtAAGCAGGCGCATCGGGCAAATGTGTGAGCCCGGGGCGCCTTATTCCATGCCGGATGCGGCGCGAGCGCCTTCGCCGGCCTACGGGCTTTCTCGGCAGACATCTTATGCTCGGTAACCTAAGTAATGGTTTCCGGTCCCTCTTcc                                                                                  <  2:60554/145‑1 (MQ=255)
                                                                  cGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTCTCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCg                                                                                 <  1:404801/149‑1 (MQ=255)
                                                                       aGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTc                                                                            >  1:738893/1‑149 (MQ=255)
                                                                        gCAGGAGCATCGGACAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCGGGTTTCg                                                                           >  2:786838/1‑149 (MQ=255)
                                                                           ggCGCATGGGGCCAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCa                                                                        <  2:171939/149‑1 (MQ=255)
                                                                             cgcATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGa                                                                      <  2:102850/149‑1 (MQ=255)
                                                                               cATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATc                                                                    <  1:755818/149‑1 (MQ=255)
                                                                                   gggCAAATGTGTGACCCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGCGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGTTCCCTGTTCCGGTTTCGGCAGATCGAGt                                                                <  2:315738/149‑1 (MQ=255)
                                                                                    ggCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGAGGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTATTCGGCAGACATCTTATGCTCGATAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGGTTACGTAGATCAAGTg                                                               >  2:24603/1‑149 (MQ=38)
                                                                                        aaTGGGTTAACCCGGGGCGCGTTATTTCATGCCGGATGCGGCGCGAGCGCCTGAGCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGCTCGCTGGTTCGGTGTCGGCAGAGCGAGTGAcgc                                                           <  2:103946/149‑1 (MQ=255)
                                                                                               tAACCCGGTGGTGCATATTGCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCGTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATCGAGTGACGCGAGCgtg                                                    <  2:365162/149‑1 (MQ=39)
                                                                                               tAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATCGAGTGACGCGAGCgtg                                                    <  1:901300/149‑1 (MQ=255)
                                                                                                 ccccGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATCGAGTGACGCGAGCGtgtt                                                  <  1:380649/148‑1 (MQ=255)
                                                                                                 aCCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGGCATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGCTCTGATGACGCCAGCGtgtt                                                  >  2:140144/1‑149 (MQ=39)
                                                                                                 aCCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATCGAGTGACGCGAGCGtgtt                                                  <  1:459103/149‑1 (MQ=255)
                                                                                                     ggggtgcCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAGCCTGATTAATGGTTTCCGGTCAATGTTCCGGTCTCGGCAGATCGAGTGACGCGAGCGTGTTGTaa                                              <  1:706457/144‑1 (MQ=39)
                                                                                                     ggTGCTCCTTATTTCATACCGGGTGCGCCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATCGAGTGACGCGAGCGTGTTGTaa                                              <  1:842280/149‑1 (MQ=255)
                                                                                                     ggTGCGCCTCATTTCATGCCGGGTGCGGCGCGGGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACAACCTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATCGAGTGACGCGAGCGTGTTGTaa                                              <  2:164992/149‑1 (MQ=255)
                                                                                                       tGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATCGAGTGACGCGAGCGTGTTGTAAGc                                            <  2:466062/149‑1 (MQ=255)
                                                                                                         cgcCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATCGAGTGACGCGAGCGTGTTGTAAGCCg                                          >  1:13312/1‑149 (MQ=255)
                                                                                                            cTTATTTCATGCCGGGTGCGGCGCGAGAGCCTTATCCGGCCTAGGGGCTTACTCGGCAGACATCTTATGCTCGGTAGCCTGATTAATGGTTTCCGGTCCCTGTTTCGGTTTCGGCAGCTCGAGTATCGCGAGCGTGTTGTTCGTCGACt                                       >  2:429443/1‑149 (MQ=255)
                                                                                                            cTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATCGAGTGACGCGa                                                         <  2:582068/131‑1 (MQ=255)
                                                                                                            cTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATCGAGTGACGCGa                                                         >  1:582068/1‑131 (MQ=255)
                                                                                                              tATTTCATGCCGGATGCGGCGCGAGCGCCTTATACGGCCTACGGGCTTACTTGGCAGACATCTTATGCTCTGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATCGAGTGACGCGAGCGTGTTGTAAGCCGACTgg                                     <  2:351733/149‑1 (MQ=255)
                                                                                                               aTTTCATGCCGGATGCGGCGCGAGCGCCTTATGCGGCCTACGCCCTTACCCAAAAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATCGAGTGACGCGAGCGTGTTGTAAGCCGACTGGc                                    <  1:345044/149‑1 (MQ=255)
                                                                                                               aTTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGt                                                                               <  1:183379/106‑1 (MQ=255)
                                                                                                               aTTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGt                                                                               >  2:183379/1‑106 (MQ=255)
                                                                                                                  tcgtGCCGGATGCGGCGGGAGGGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTGGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATCGAGTGACGCGAGCGTGTTGTAAGCCGACTGGCTca                                 <  2:155545/146‑1 (MQ=255)
                                                                                                                    aTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATCGAGTGACGCGAGCGtgttg                                                 >  1:197683/1‑131 (MQ=255)
                                                                                                                    aTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATCGAGTGACGCGAGCGtgttg                                                 <  2:197683/131‑1 (MQ=255)
                                                                                                                        cGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATCGAGTGACGCGAGCGTGTTGTAAGCCGCCTGGCTCACACCGc                           >  1:60507/1‑149 (MQ=255)
                                                                                                                             gcggcgCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATCGAGTGACGCGAGCGTGTTGTAAGCCGACTGGCTCACACCGCCCTCg                      <  1:648221/149‑1 (MQ=255)
                                                                                                                                ggcgCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATCGAGTGACGCGAGCGTGTTGTAAGCCGACTGGCTCACACCGCCCGCGaa                    >  1:636121/1‑149 (MQ=255)
                                                                                                                                       gcgcCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATCGAGTGACGCGAGCGTGTTGTAAGCCGACTGGCTCACACCGCCCTCGAAGCTCAtc             <  2:13312/149‑1 (MQ=255)
                                                                                                                                             caTCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATCGAGTGACGCGAGCGTGTTGTCAGCCGTCCTGCGGTCACCGCCCTCGAAGCTCATctcgctc       <  1:441821/148‑1 (MQ=255)
                                                                                                                                               tCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATCGAGTGACGCGAGCGTGTTGTAAGCCGACTGGCTCACACCGCCCTCGAAGCTCATCtcgctcgc     >  2:64061/1‑149 (MQ=255)
                                                                                                                                                  ggCCGACGGGCTTACTCGTCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATCGAGTGACGCGAGCGTGTTGTAAGCCGACTGGCTCACACCGCCCTCGAAGCTCATCTCGCTCGtccc  <  2:608647/149‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                 
AACGCCTTATCCGTCCTACGGGTGTCTGCCAGCGCAAATAATCGCGGCTTTCCCCGTCTGTAGGCCCGATAAGCAGGCGCATCGGGCAAATGTGTTAACCCGGTGCGCCTTATTTCATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGGGCTTACTCGGCAGACATCTTATGCTCGGTAACCTGATTAATGGTTTCCGGTCCCTGTTCCGGTTTCGGCAGATCGAGTGACGCGAGCGTGTTGTAAGCCGACTGGCTCACACCGCCCTCGAAGCTCATCTCGCTCGCCCC  >  NC_000913_3_KO_pgi/3114394‑3114687

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.