| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_pae_pgi | 1,195,102 | T→G | intergenic (‑151/‑21) | rluE ← / → icd | 23S rRNA pseudouridine(2457) synthase/isocitrate dehydrogenase; e14 prophage attachment site; tellurite reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_pgi | 1,195,102 | 0 | T | G | 99.1% | 407.4 / NA | 116 | intergenic (‑151/‑21) | rluE/icd | 23S rRNA pseudouridine(2457) synthase/isocitrate dehydrogenase; e14 prophage attachment site; tellurite reductase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base G (65/50); minor base A (1/0); total (66/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 116 total aligned reads displayed.
TAATAACGCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAA > NC_000913_3_pae_pgi/1194959‑1195246 | taataaCGCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCt > 1:434567/1‑150 (MQ=255) ataaCGCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTGTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCg > 2:874301/1‑150 (MQ=255) aCGCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTCACAAAAAATTGCTCTATAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAg < 1:1010491/150‑1 (MQ=255) aCGCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTTGTGGCAGACGAGCAAACCAGGAGCGCTCGAAg < 2:646410/150‑1 (MQ=255) cgcgCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAgg < 2:299201/150‑1 (MQ=255) cgcATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGgag < 1:882850/150‑1 (MQ=255) cATCCTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGagag < 3:691856/150‑1 (MQ=255) aTCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAgg > 2:327618/1‑150 (MQ=255) aCGGCAAACAATAGGGGAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGaaa < 4:649660/150‑1 (MQ=255) ggCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGaaagt > 1:1017866/1‑150 (MQ=255) gCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGaaagta > 3:626617/1‑150 (MQ=255) gCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGaaagta > 2:1129061/1‑150 (MQ=255) aaaCAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGaaagtaaa > 1:1099666/1‑150 (MQ=255) aaaCAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGaaagtaaa < 1:581664/150‑1 (MQ=255) tAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAgtt < 2:51745/150‑1 (MQ=255) tAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAgtt < 2:1099666/150‑1 (MQ=255) gtagtaTTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAACGCATCCGTATCGCAGGACGCAAACGCATATGCAACGCGGTGGCAGACGCGCAAACCAGGAGCGCTCGAAGGCGCGGTGAACGGAAAGCACAGTAGTTGTTc > 2:308589/1‑150 (MQ=255) gtaggaTTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCATGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCTCTCGAACGAGAGGTGAATGGAAAGTAAAGTAGTTGTTc < 2:172857/150‑1 (MQ=255) tagtaTTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTcc > 1:958318/1‑150 (MQ=255) taTTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACTCAAAAGCATATGCAACGTGGTGGCAGACGATCAAACCACAAGCGCTCGAAGGAGAGGTGAATGGAAAGTAGAGTAGTTGTTCCGGc > 2:589331/1‑150 (MQ=255) taTTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGc > 4:268049/1‑150 (MQ=255) tGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGcaca > 2:355182/1‑150 (MQ=255) gACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGaa > 3:236631/1‑121 (MQ=255) gACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGaa < 4:236631/121‑1 (MQ=255) gCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAgg < 3:170021/147‑1 (MQ=255) gCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAgg > 4:170021/1‑147 (MQ=255) ccAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCaag > 2:1092408/1‑150 (MQ=255) ccAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCaag > 1:292955/1‑150 (MQ=255) cAAGTACAAATCAATAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCaaga < 4:455374/150‑1 (MQ=255) aaTTACAAATCATTCACAAAAAATTGCTCTAGAGCATGCGTATCGCAGGACGGAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCaagaa < 2:632686/150‑1 (MQ=255) cAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCa < 3:476393/150‑1 (MQ=255) aaaTCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGTGGAGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCAc > 4:411090/1‑150 (MQ=255) aaaTCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGa > 2:322362/1‑111 (MQ=255) aaaTCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGa < 1:322362/111‑1 (MQ=255) aaTCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCAcc < 1:327618/150‑1 (MQ=255) aaTCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCAcc > 2:56237/1‑150 (MQ=255) aTTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGc > 2:793890/1‑150 (MQ=255) ttAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCa > 2:1067519/1‑150 (MQ=255) tAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCaa > 1:70448/1‑150 (MQ=255) aCAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCaaaa < 2:593773/150‑1 (MQ=255) aCAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGAGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCaaaa > 4:147725/1‑150 (MQ=255) cAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGCGGTGGCAGACGAGCAAACCAGGAGCGCCCGAAAGAGAGGAGAATGGAAAGTAACGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAAc > 2:175449/1‑150 (MQ=255) aaaaaaTTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACg > 3:60917/1‑150 (MQ=255) aaaaaaTTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACg > 1:1075471/1‑150 (MQ=255) aaaaaTTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACgg > 4:106505/1‑150 (MQ=255) aaaaaTTGCTCTAAAGCAACCGTATCGCAGGACGCAAACGCATATGCTACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGAGAATGGAAAGTAAAGCAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACgg > 2:732423/1‑150 (MQ=255) aaaaTTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGc > 2:834977/1‑150 (MQ=255) aaaTTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTcc > 4:606722/1‑115 (MQ=255) aaaTTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTcc < 3:606722/115‑1 (MQ=255) aaTTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCaaaataccat < 2:594141/150‑7 (MQ=255) aTTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCaaa > 1:964370/1‑150 (MQ=255) aTTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCaaa > 3:725921/1‑150 (MQ=255) tAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACg > 1:85423/1‑150 (MQ=255) aaaGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTcc < 3:340366/105‑1 (MQ=255) aaaGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTcc > 4:340366/1‑105 (MQ=255) aGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTc < 4:60917/150‑1 (MQ=255) ccGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGaa < 1:1129061/150‑1 (MQ=255) ccGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGaa < 2:199059/150‑1 (MQ=255) tCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATcc > 2:213581/1‑150 (MQ=255) cGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCg > 4:548381/1‑150 (MQ=255) cGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACAAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCg < 2:1004201/150‑1 (MQ=255) gCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGa < 1:213581/150‑1 (MQ=255) gCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGa < 2:188882/150‑1 (MQ=255) gCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGa < 2:958318/150‑1 (MQ=255) cAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGAt > 4:461197/1‑150 (MQ=255) cAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGAt < 3:268049/150‑1 (MQ=255) aaaCGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCtt > 3:450906/1‑150 (MQ=255) aaaCGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCtt > 2:610109/1‑150 (MQ=255) aaaCGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCtt > 2:342947/1‑150 (MQ=255) aaCGCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTa < 2:82461/150‑1 (MQ=255) gCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACAt > 4:551125/1‑150 (MQ=255) gCATATGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACAt > 3:676925/1‑150 (MQ=255) atatGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTg > 2:225940/1‑150 (MQ=255) tatGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATGGa > 1:352443/1‑150 (MQ=255) atGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTc > 2:1007007/1‑121 (MQ=255) atGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTc < 1:1007007/121‑1 (MQ=255) atGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGaa < 3:548381/150‑1 (MQ=255) tGCAACGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAg > 2:836646/1‑150 (MQ=255) tGCAACGTGGGGGCAGACGAGCAAACCATGAGCGCTGGAAGGAGAAGTAAAGGGAAATTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAg < 1:943034/150‑1 (MQ=255) aaCGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGAt > 2:1165449/1‑88 (MQ=255) aCGTGGTGGCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGa < 1:834977/150‑1 (MQ=255) tggCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAAt > 2:983800/1‑150 (MQ=255) tggCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAAt > 2:138067/1‑150 (MQ=255) ggCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAAc > 2:910992/1‑105 (MQ=255) ggCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAAc < 1:910992/105‑1 (MQ=255) ggCAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGATCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATc > 1:679434/1‑150 (MQ=255) cAGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCgn < 4:450906/150‑2 (MQ=255) aGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGc > 1:1152818/1‑93 (MQ=255) aGACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGc < 2:1152818/93‑1 (MQ=255) gACGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGgtg > 2:800446/1‑150 (MQ=255) aCGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGgtgt > 3:191636/1‑150 (MQ=255) aCGAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGgtgt < 3:106505/150‑1 (MQ=255) gAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAg > 2:628545/1‑150 (MQ=255) gAGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAg < 3:462178/150‑1 (MQ=255) aGCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTGCCTGAAAACCCGATTATCCCTTACATTGAAGGGGAGGGAATCGGTGTAGa > 4:325009/1‑150 (MQ=255) gCAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGAt < 4:676925/150‑1 (MQ=255) cAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCaagaag < 4:121453/68‑1 (MQ=255) cAAACCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCaagaag > 3:121453/1‑68 (MQ=255) aaCCAGGAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTa > 3:503263/1‑150 (MQ=255) aCCAGGAGCGCTCGAAGGAGCGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGCTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTaa > 2:568930/1‑150 (MQ=255) | TAATAACGCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAA > NC_000913_3_pae_pgi/1194959‑1195246 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |