Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913_3_pae_pgi 3635047 3653122–3652030 16984–18076 34 [0] [5] 8 [yhiM]–[insH1] [yhiM],yhiN,pitA,uspB,uspA,dtpB,rsmJ,prlC,rlmJ,gor,dinQ,agrA,agrB,arsR,arsB,arsC,yhiS,[insH1]

CGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAATACGTTTTACAATACATTGTTCCCCATTATTGGCTATGCGGGGTCAATTATCACCATGATATGGGGTTGGGCACTGTTAGCAGGCAATGATGTGATGGCAGACGAGTTTGTCGCCGGCCATGTTATTTTCGGCGTTGGTATGATTGC  >  NC_000913_3_pae_pgi/3634903‑3635193
                                                                                                                                               |                                                                                                                                                   
cgcgTTAGGTGGCTTGGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaag                                                                                                                                                <  2:140498‑M1/149‑6 (MQ=255)
       ggTGGCTTTGTGCAGGAAAGTTCAGGCCAAAGCGAGTATTTCGTCGCGGGACATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaa                                                                                                                                         >  1:423894‑M1/1‑137 (MQ=255)
         tGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaata                                                                                                                                       >  1:436263‑M1/1‑135 (MQ=255)
         tGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGACGCGGGTCATGTGCTGATTTCTCTGGCGGCCAGATGCCTGGCATTATTCACTACCGCGTTTATTATCATTTCGCCGCTCGCGCCCGGCGTTAAggaaggtgcgaata                                                                                                                                       >  1:244081‑M1/1‑135 (MQ=255)
             tttGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcg                                                                                                                                   <  1:300871‑M1/149‑19 (MQ=255)
             tttGTGCTGGAAAGCTCATGGCAAAGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcg                                                                                                                                   <  2:377015‑M1/149‑19 (MQ=255)
               tgtgCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggg                                                                                                                                 <  1:208506‑M1/149‑21 (MQ=255)
                  gCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaa                                                                                                                              >  2:334054‑M1/1‑126 (MQ=255)
                   cTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaa                                                                                                                             <  1:498583‑M1/149‑25 (MQ=255)
                           ttCAGGGCAAAGCGAGTCTTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctc                                                                                                                     <  1:490656‑M1/149‑33 (MQ=255)
                                  cAAAGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATATATTATCCTTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgac                                                                                                              <  2:306375‑M1/149‑40 (MQ=255)
                                    aaGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgaccc                                                                                                            >  2:247662‑M1/1‑108 (MQ=255)
                                     aGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactca                                                                                                           <  2:338271‑M1/149‑43 (MQ=255)
                                     aGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactca                                                                                                           <  2:354844‑M1/149‑43 (MQ=255)
                                          gTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcat                                                                                                      <  1:334054‑M1/149‑48 (MQ=255)
                                                   cgcgGGTCATGTTCTTATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttct                                                                                             <  1:462561‑M1/149‑57 (MQ=255)
                                                           aTGTGCTGATTTCTGTGGCGGCCATATGGCTGGCATGATTCACTTCCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                     <  2:395599‑M1/149‑65 (MQ=255)
                                                           aTGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                     >  2:298522‑M1/1‑85 (MQ=255)
                                                           aTGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcgg                                                                                                                   >  1:28675‑M1/1‑85 (MQ=255)
                                                           aTGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcgg                                                                                                                   <  2:28675‑M1/119‑35 (MQ=255)
                                                           aTGGGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                     <  2:299584‑M1/149‑65 (MQ=255)
                                                             gtgCTGATTTCTCTGACAGCCAGGTTCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttga                                                                                   <  1:10115‑M1/149‑67 (MQ=255)
                                                                cTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagcc                                                                                >  2:363600‑M1/1‑80 (MQ=255)
                                                                            gcggcCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcc                                                                    >  1:283962‑M1/1‑68 (MQ=255)
                                                                            gcggcCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttcccggctgactcagtcatttcatttcttcatgtttgagccgattttttctcc                                                                    >  1:260089‑M1/1‑68 (MQ=255)
                                                                               gcCATATGCCTTGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt                                                                 <  2:222296‑M1/149‑85 (MQ=255)
                                                                                       ccTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatatacgctggtttgagccgattttttctcccgtaaatgcct                                                         <  1:510737‑M1/149‑93 (MQ=255)
                                                                                                    aCTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt                                                                                       >  2:429008‑M1/1‑44 (MQ=255)
                                                                                                    aCTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt                                                                                       <  1:429008‑M1/106‑63 (MQ=255)
                                                                                                        ccGCATTTATTATCATTTCGCAGCTCACGCGCGGTGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttag                                        >  1:243985‑M1/1‑40 (MQ=255)
                                                                                                                   atCATTTCGAAGCTCACGCGCGGCGTTAAggaaggtgcgaataagccgggaaattcttctcggctgactcagtcatttcattgcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttc                             <  2:363758‑M1/149‑121 (MQ=255)
                                                                                                                                tCACGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcg                >  1:185102‑M1/1‑16 (MQ=255)
                                                                                                                                  aCGCGCGGCGTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttagccatgtaaggcggt              >  1:197086‑M1/1‑14 (MQ=255)
                                                                                                                                              aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt  >  2:162598‑M1/1‑2 (MQ=255)
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CGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAATACGTTTTACAATACATTGTTCCCCATTATTGGCTATGCGGGGTCAATTATCACCATGATATGGGGTTGGGCACTGTTAGCAGGCAATGATGTGATGGCAGACGAGTTTGTCGCCGGCCATGTTATTTTCGGCGTTGGTATGATTGC  >  NC_000913_3_pae_pgi/3634903‑3635193

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: