New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_pgi	4239417 =	NA (NA)	7 (0.140)	6/256	NT	NA	noncoding (1/37 nt)	REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences
	?	NC_000913_3_pae_pgi	4239450 =	NA (NA)					noncoding (34/37 nt)	REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences

TCACAGTGGCGAGCTTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_pae_pgi/4239571‑4239417 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggcCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCT  >  NC_000913_3_pae_pgi/4239450‑4239597                                                                                                                                                                                                                                                                                                                 TCACAGTGGCGAGCTTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGGCCCTGGCGGCGCA                                                                                                                                                            >  1:976873/1‑149 TCACAGTGGCGAGCTTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATATGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCGGGCGGCGCA                                                                                                                                                            >  1:254817/1‑149   ACAGTGGCGAGCTTCCTGTATAACGCAAAAATGTGACGGGGATCTATATTTTTTGTGTATGTTTTGTTCAACCCGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGACGGCGCATC                                                                                                                                                          >  1:917442/1‑149   ACAGTGGCGAGCTTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATC                                                                                                                                                          <  2:319310/149‑1   ACAGTGGCGAGCTTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATC                                                                                                                                                          >  1:362381/1‑149   ACAGTGGCGAGCTTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATC                                                                                                                                                          >  1:506638/1‑149   ACAGTGGCGAGCTTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATC                                                                                                                                                          >  2:416676/1‑149   ACAGTGGCGAGCTTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATC                                                                                                                                                          >  2:385241/1‑149   ACAGTGGCGAGCTTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAACCGGATATACCTACCCGTAGACCGGATAAGCCGCGCCAGGCGGCGCATC                                                                                                                                                          >  1:359672/1‑149    CAGTGGCGAGCTTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTATTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGACGGCGCATCC                                                                                                                                                         >  1:874247/1‑149     AGTGGTGGGCTTCCTGTACAACGCTAAAATGTTACGGAGATCTATATTTTTTGTGTATTTTTTGTTCAACCTGGATTTGGAGCGCGCCTTCTCCAAGGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATCCG                                                                                                                                                        <  1:21940/149‑1     AGTGGCGAGCTTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTTTGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCATAGATGGATATACTTACCTGTTGGTCGGATAAGCCGCGCCTGGCGGCGTATCCG                                                                                                                                                        >  2:859178/1‑149      GTGTCGAGCTTCCTGTATACTGCAAAAATGGGGCGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGACTTGGAGCGTGCCTCCTCCAAAGCCGGATATTCCTACCCGTAGGCCTGATAAGCCGCGCCTGGCGGCGCATCCGG                                                                                                                                                       <  2:985898/149‑1      GTGGCGAGCTTCGTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCATCCTGGATTTGGGGCGCGCGGCAACGAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATCCGG                                                                                                                                                       <  1:6236/149‑1      GTGGCGAGCTTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGATCGCGTCTCCACCAGAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATCCGG                                                                                                                                                       <  2:841380/149‑1      GTGGCGAGCTTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATCCGG                                                                                                                                                       <  1:462532/149‑1      GTGGCGAGCTTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATCCGG                                                                                                                                                       <  1:621725/149‑1       TGGCGGGTTTCCTGGATAACTCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGGGCGCGCCTCTACCAAAGCCCGATATACCTCCCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATCCGGC                                                                                                                                                      <  2:450720/149‑1       TGGCGAGCTTCCTGTATACAGCAAAAATGTGACGAAGTTATTTGTCTGTTTTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATCCGGC                                                                                                                                                      <  1:579934/149‑1       TGGCGAGCTTCCTGTATAACGCAAAGATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGAGATACCTAGCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATCCGGC                                                                                                                                                      >  1:763928/1‑149       TGGCGAGCTTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGCGCGCGCCTCCAAAAAAGCCGGACATACCTACCCGTAGCCCGCAAAAGCCGCACCTGGCGACTCAGCCGGC                                                                                                                                                      >  2:660952/1‑149       TGGCGAGCTTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCTTAGGCCGGATACGCCGCGCCTGGCGGCGCATACGGC                                                                                                                                                      >  1:171919/1‑149       TGGCGAGCTTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATCCGGC                                                                                                                                                      >  2:79386/1‑149       TGGCGAGCTTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATCCGGC                                                                                                                                                      >  1:520105/1‑149       TGGCGAGCTTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATCCGGC                                                                                                                                                      <  1:520263/149‑1         GCGAGCTTCCTGTATAACGTAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAACCCGCGCCCGCCGCCGCACCCGGCCa                                                                                                                                                    >  2:846591/1‑148         GCGAGCTTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGCTAAGCCGCGCCTGGCGGCGCATCCGGCCa                                                                                                                                                    >  2:303687/1‑148         GCGAGCTTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATCCGGCCa                                                                                                                                                    >  2:130228/1‑148         GCGAGCTTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACATACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGAATCCGcaca                                                                                                                                                    >  1:125828/1‑145             GCTTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCCTCCGGacagaca                                                                                                                                                >  2:738401/1‑142               TTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATCCGG                                                                                                                                                       <  1:587859/140‑1               TTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATCCGG                                                                                                                                                       >  2:587859/1‑140                           GCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATCCGG                                                                                                                                                       <  1:916420/128‑1                           GCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATCCGG                                                                                                                                                       >  2:916420/1‑128                                                 TATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATCC                                                                                                                                                         <  1:935543/104‑1                                                 TATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATCC                                                                                                                                                         >  2:935543/1‑104                                                                                        GCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATC                                                                                                                                                          <  1:249109/64‑1                                                                                        GCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATC                                                                                                                                                          >  2:249109/1‑64                                                                                                    AAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATCCGGCCTACGGGTAGGTATATCCGGCTTTGATGGAGGCGCGCTCCAAATCCAAGTTGAACAAAACATACACAAAAAATATAAATAACCGCCACATcta                                                         >  1:80767/1‑146                                                                                                                           GCCGGATAAGCCGCGCCTGGCGGCGCATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCA                                  >  1:839640/1‑149                                                                                                                           GCCGGATAAGCCGCGCCTGGCGGCGCATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGC                                                                                                                   <  1:153907/68‑1                                                                                                                           GCCGGATAAGCCGCGCCTGGCGGCGCATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGC                                                                                                                   >  2:153907/1‑68                                                                                                                             CGGATAAGCCGCGCCTGGCGGCGCATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACT                                >  1:972427/1‑149                                                                                                                               GATAAGCCGCGCCTGGCGGCGCATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGT                              >  1:503921/1‑149                                                                                                                                    GCCGCGCCTGGCGGCGCATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGG                         <  2:972427/149‑1                                                                                                                                                   tgATCCGGCCTACGCGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAAGATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCTCCACTTTGAAGGAGGTACTGCTATGAC          <  1:165953/147‑1                                                                                                                                                   gtagCCGGCCTACGGGTAGACATATCCCGCCTTGGTGTATGCTCGTTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTTGCCACTGTGAAGGAGGTACTGCTATGAC          <  2:394990/145‑1                                                                                                                                                     agCCGGCCTACGGGTAGGTATTCCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGTTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGT        <  2:977374/147‑1                                                                                                                                                     ATCCTGCCTACGGGTAGGTATATCCGGCGTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATGCACAAAAAATATAGATCTCCGTCAGATTTTTGCGGTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGT        <  1:104621/149‑1                                                                                                                                                     ATCCGGCCTATGTGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGT        <  1:823996/149‑1                                                                                                                                                     ATCCGGCCTAGCGTTTGGTCTATTCTGCTTTGGGTGAGGCGCGCTCCAAATCCAGCTTGAACAAAACATACACAAAAAATATAGATCTACGTCACATCTTTGCTTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACtt        <  2:164114/149‑3                                                                                                                                                     ATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGT        <  1:367673/149‑1                                                                                                                                                     ATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGT        <  1:165633/149‑1                                                                                                                                                     ATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGT        >  2:498001/1‑149                                                                                                                                                     ATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGT        <  2:66336/149‑1                                                                                                                                                     ATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTAGCCACTGTGAAGGAGGTACTGCTATGACGT        >  2:989857/1‑149                                                                                                                                                     ATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTACGTTATACAGGAACCTCGCCACTATGAAGGAGGAACTGCTATGACtg        >  1:681499/1‑147                                                                                                                                                     ATCCGGCCTACGGGTAGGTATATCCGGCTTCGGTGGAGGCGCGCTCCAATTTCATGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGT        <  1:505643/149‑1                                                                                                                                                     ATCCGGCCGACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGT        <  2:406286/149‑1                                                                                                                                                     ATCCGGACTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGT        <  1:958685/149‑1                                                                                                                                                      TCCGGCTTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTC       <  2:16740/149‑1                                                                                                                                                      TCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACCTACACAACAAATATAGATCTCCGTCACATTTTTGCGTTATACCGGAAGCTCGCCACTGTCAAGCAGGTCCTGCCATaccgta       >  2:730979/1‑143                                                                                                                                                      TCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTC       >  2:39169/1‑149                                                                                                                                                      TCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTC       >  2:832997/1‑149                                                                                                                                                      TCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGAAAGCTCGCCACTGTGAAGAAGGACCTGCTATGACGTa       >  1:582696/1‑148                                                                                                                                                       CCGGCGTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCTGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTCTGACGacc      <  2:878059/149‑4                                                                                                                                                       CCGGCCTACGTGCAGCTATAGCCGGCTCTACTTGAGGCTCCCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATATATCTCCGTCACATTGTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCA      <  2:190452/149‑1                                                                                                                                                       CCGGCCTACGGGTTGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGTACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCA      <  1:89811/149‑1                                                                                                                                                       CCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCA      <  2:813472/149‑1                                                                                                                                                       CCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCA      <  1:960155/149‑1                                                                                                                                                       CCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCA      <  1:109243/149‑1                                                                                                                                                        CGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAGTATAGATCTCCGTCACATTTTTGCGTTATACAGTTTGCTCGCTACTGTGATGGAGGTACTATTTTGATGTCAC     >  1:47882/1‑149                                                                                                                                                        CGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGCCGTCAC     >  1:321500/1‑149                                                                                                                                                        CGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCAC     >  2:768355/1‑149                                                                                                                                                        CGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCAC     >  1:878853/1‑149                                                                                                                                                        CGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAAGAAGCTCGCCACTGTGAAGGAGTCACTGATATGACGTCAC     >  2:432768/1‑149                                                                                                                                                        CGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTAGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCAC     <  1:196672/149‑1                                                                                                                                                        CGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTACAAATCCAGGTTGAACAAAACATACACAACAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACttaac     >  2:763796/1‑144                                                                                                                                                        CGGCCGAGGGGTAGGGATATCCGGCTTTGGTGGAGGCGCGCTCCAATGCAAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCAC     <  2:775449/149‑1                                                                                                                                                         cGCCTACCTGTAGGTATATCCGGCTTTGATCGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACT    <  1:203895/148‑1                                                                                                                                                         GGCCTACGGGTAGGTATATCCTGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACT    <  1:818766/149‑1                                                                                                                                                         GGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTAAACAGGAAGCTCGCCACTGGGAAGTAGGTACTGCTATGACGTCCCT    >  2:466344/1‑149                                                                                                                                                         GGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGATGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGACCTGCTATGACGTCACT    >  2:943513/1‑149                                                                                                                                                         GGCCTACGGGTAGGTATATCCGGCTTAGGTGGAGGCGCGATCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAGGGAGGTACTACAATAACGTCcat    >  2:323685/1‑146                                                                                                                                                         GGCCTACGGGTAGGTATATCCGGCTCTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACAGACACAAAAAATATAGATGTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTTAAGGAGGTACTGCTATGACGTCACT    <  1:910191/149‑1                                                                                                                                                          GCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCCCTGTGAAGGAGGTACTGCTATGACGTCACTC   >  1:295289/1‑149                                                                                                                                                          GCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCCCCACTGTGAAGGAGGTACTGCTATGACGTCACTC   >  1:173259/1‑149                                                                                                                                                           CCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCT  <  2:730990/149‑1                                                                                                                                                           CCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCT  <  2:834820/149‑1                                                                                                                                                           CCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTACGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATTACGTCACTCT  >  1:681865/1‑149                                                                                                                                                                                                                                                                                                                 TCACAGTGGCGAGCTTCCTGTATAACGCAAAAATGTGACGGAGATCTATATTTTTTGTGTATGTTTTGTTCAACCTGGATTTGGAGCGCGCCTCCACCAAAGCCGGATATACCTACCCGTAGGCCGGATAAGCCGCGCCTGGCGGCGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_pae_pgi/4239571‑4239417 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggcCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCT  >  NC_000913_3_pae_pgi/4239450‑4239597

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.