| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913_3_pae_pgi | 3,439,589 | G→C | 6.1% | intergenic (‑80/+27) | yhdN ← / ← rplQ | DUF1992 family protein/50S ribosomal subunit protein L17 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_pgi | 3,439,589 | 0 | G | C | 6.1% | 173.1 / 5.4 | 68 | intergenic (‑80/+27) | yhdN/rplQ | DUF1992 family protein/50S ribosomal subunit protein L17 |
| Reads supporting (aligned to +/- strand): ref base G (33/30); new base C (2/2); total (36/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.27e-01 | |||||||||||
TTATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCAT‑CGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACG > NC_000913_3_pae_pgi/3439442‑3439732 | ttATCAAACTCACCTTTGTCCTGTCCTTCTTCTATATTGCGCTCTGCCCACTGGTTAAGTAACCACATAAATACTCCAGGGGAAAAACAAAAAGTTTTATGCTATTGTAGATAAGTGGGGCTACTACGTGTATAAAAAAACCAGCCggg < 2:213093/149‑1 (MQ=255) aTCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGc > 1:395672/1‑149 (MQ=255) aaCTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATACACAGAAGGAGTACAGCTATTGTAGATCAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGt < 1:443353/149‑1 (MQ=255) aCTCTCCTTACTCTTGCACTTTTTGTATTTGGCCCTCTGCCCACGGGTCAATTAACCACATAAATAGCCCAGGGGATGAACCAACAGAGTTTACCTTATGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGtt < 2:418502/149‑1 (MQ=255) tCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTGAAGTAACCACATAAATACTTGAGGGGATGAACAAAAATAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTAGAAAAAAACCCGCCGGGGCGGGtttt > 1:907167/1‑149 (MQ=255) cACCTTTCGCTTTCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGttttt < 1:520961/149‑1 (MQ=255) aCCTTTCGCTTGCGCTTGTGTTATATGGCGCTCTGTCCACTGGTCAAGTAACCACATAAATACTCCAGTGGATGAACAAAAAGAGGACAGCTATTGTAGATAAGTGGGGATACTACGGCTTCAAATTAACCCGCCGGGGCGGGtttttt < 2:972396/149‑1 (MQ=255) aCCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGtttttt < 1:622989/149‑1 (MQ=255) tttCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGAGAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGAGGCGGGgttttttgc > 2:243831/1‑147 (MQ=255) gcgcTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTc < 1:96680/149‑1 (MQ=255) gcTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAg > 1:811082/1‑149 (MQ=255) cTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTa > 1:469339/1‑149 (MQ=255) tGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGTTTTAAAAAAACCCGCCGGGGCGGGTTTTTTTACATTGCTTCAgcctac > 1:439607/1‑144 (MQ=255) gCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTAct > 1:952048/1‑149 (MQ=255) gCTATATGGCGCTCTGACAACTGGTCAAGAAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTAct < 1:289262/149‑1 (MQ=255) cTATATGGCGCCCTGCCCACTGGTCAAGTAACCACATAAATAGTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTGTTTTACGTCGCTGCAGACTAgtc > 2:605253/1‑149 (MQ=255) tataTGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTActct < 1:738104/149‑1 (MQ=255) tataTGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGAATACTACGGGTATAACAAAACCCCCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTActct > 2:950622/1‑149 (MQ=255) tatGGCGCTGTGCCCATGGTTCCAGTTCCCAGCGAAATACACCACGGGACGTACAAAAAGTGTCCATCTATAGTTGTTAAGGTGGGTTATGTCTGGTTTAAAAAGACCCTCTGGGTCAGGTTTTTTTACGTTGCTTCCGATTACTCTgc < 2:950793/149‑1 (MQ=255) atGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGCGTAAAGCTATTGTAGATAAGTGGGGATCCTACGGGTATAAAAAAACGCGCCGGGGCGGGTTTGTTTTCGTTGCTTGTGCTTACTCTgca > 1:410363/1‑149 (MQ=255) tGGCGCTCCGCCAACTGGTCAAATAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTgcag < 2:717998/149‑1 (MQ=255) ggCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTgcagc < 1:857518/149‑1 (MQ=255) cgcgcggCCCAGTGGTCAAGTAGCCACATAAATACTCCAGGGGATGAACAAAAAGAGGACAGTTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGcagcag < 2:426169/143‑1 (MQ=255) cccACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATATAAAAACCCGCCGGGGCGGGGTTTTTTACGTTGCTTCAGATTAGTCTGCAGCAGATTCTgt > 1:435625/1‑148 (MQ=255) cccACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGc > 2:38147/1‑149 (MQ=255) ggTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCgg > 2:185960/1‑101 (MQ=255) ggTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCgg < 1:185960/101‑1 (MQ=255) aaGTAACCACATAAATACTTCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGaa < 1:734474/149‑1 (MQ=255) aaGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGAACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAACCCCGCCGGGGCGGGTGTTTTTACGTTGCTTCAGATTACTCTGCACCAGCTTCTACTTTCTATGaa > 2:831020/1‑149 (MQ=255) aaGTAACCACATAAATACTCAAGGGGATGAACACAACGAGTACCGCAATAAAAGATAGGAGGGGATACTAGGGGTATAAAAAAACCCGCCGGGGCGCGTTTTTTTGCTTTACTGCACTTTCATCTGCAGCACCTCGCGCTATCTCTgca > 2:369571/1‑147 (MQ=255) tAACCACATAAATACTCCTGGGGATGTATAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGGATAAAAAAACCCGCCGGGGCGGGTTTTTTTAGGTTGCTTGAGATTGGTCTGCAGCAGCTTTTGGTTTCTGTGataga > 2:703134/1‑145 (MQ=255) tAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAACCCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGa < 2:811082/149‑1 (MQ=255) cacaTAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGCTACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGATCCTGCTTTCTCTGATCGATCaa > 1:229772/1‑149 (MQ=255) caTAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGGTTTTTTACGTTGCTTCAGATTACTCTGCCGCAGCTTCTGCTTTCTCTGAACGATCAAcc > 2:742385/1‑149 (MQ=255) aTACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTc > 1:242820/1‑149 (MQ=255) cAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTACTTTCTCTGAACGATCAACCAGCTCGATGTa > 1:838568/1‑149 (MQ=255) gggATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGAATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCAGAACGATCAACCAGCTCGATGTCAGc > 2:976829/1‑149 (MQ=255) aTGAACAAAAAGATCACAGCTATTGGAGATAAGTGGGTATACTACGGGTATAAAAAATCCCGCCAGGGCGGGTTCTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCAt < 2:935609/149‑1 (MQ=255) aaCAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCAT‑Cgg > 1:766574/1‑149 (MQ=255) aaCAAAAAGAGTACAGCTATTGTAGATAAGTGAGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCATATTCTGCTTTCTCTTAACGATCAACCAGCTCGATGTGAGCCAT‑Cgc > 2:265125/1‑148 (MQ=255) aaaaaGAGTACGGGTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTTCTGCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCAT‑CGgcgc < 1:641580/149‑1 (MQ=255) aaaaGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTGTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAAACAGCTCAATGTAAACCAT‑CTgcgca > 1:164344/1‑148 (MQ=255) aaaaGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCCCGGCGGGTTTTTTTa < 1:672994/73‑1 (MQ=37) aaaaGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCCCGGCGGGTTTTTTTa > 2:672994/1‑73 (MQ=37) gagTACAGATATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCAT‑CGGCGCGTTGt < 2:333246/149‑1 (MQ=255) tatctcTATTGTAGATAAGTGGGGATACTATGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGAAGCTTATGCTTTCGCTGAACGATCAACCAGCTCGATGTAAGCCAT‑CGGCGCGTTGTCGc < 2:5198/144‑1 (MQ=255) gTAGATAAATGGGGAAACTACGGTTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCAT‑CGGCGCGTTGTCGCCTGCACGGaa < 1:997044/149‑1 (MQ=255) gaGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGATTCTGCTTTCTCTGAACGATCAACCAGCTCGAAGTAAGCCAT‑CGACGCGTTGTCGCCGGCACGGAAg > 1:801651/2‑149 (MQ=255) gATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCAT‑CGGCGCGTTGTGGGCTGCACGGAAggc > 1:632248/1‑147 (MQ=255) aTAAGTGGGGATACTACGGGTATAAAAAAACCCCCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATTTAAGCCAT‑CGGCGCGTTGTCGCGGCCACAGAAGcaa > 1:344122/1‑147 (MQ=255) gggATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCCAGCAGGTT‑TCGCCTGCACGGAAGCCACACTTCa < 2:469339/149‑1 (MQ=255) aTACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACTATCAACCAGCTCGATGTAAGCCAT‑CGGCGCGTTGTCGCCTGCACGTACGCAACACTTCAGaa < 2:907167/149‑1 (MQ=255) aTACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCAT‑CGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGaa < 1:38147/149‑1 (MQ=255) aTACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCAT‑CGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGaa < 2:661145/149‑1 (MQ=255) tacGGTTATAAAAAAACCCGCCGGGGCGCGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCAT‑CGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACg < 1:183939/149‑1 (MQ=255) gggggTACAATAGAACCCGGCGGGGCGGGTTTTTTTACGTTCGTTCGGATTACTCTGTAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCAT‑CGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGa < 2:77700/147‑1 (MQ=255) atgggTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCAT‑CGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGa < 1:220920/147‑1 (MQ=255) acGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCAT‑CGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGa < 2:242820/149‑1 (MQ=255) aagtgTATAAAAAAACCCGCCGGGGCCGGTTTTTTTACTTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCAT‑CGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGa < 2:164344/145‑1 (MQ=255) gTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCAT‑CGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAgtgt > 1:357458/1‑149 (MQ=255) aaaaaCCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCAT‑CGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAaccac > 2:365162/1‑149 (MQ=255) aaaaaCCCGCCGGGGCGGGTTGTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCAT‑CGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAaccac < 1:950622/149‑1 (MQ=255) aaaaaCCCGCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGt < 1:943799/89‑1 (MQ=255) aaaaaCCCGCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCACCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGt > 2:943799/1‑89 (MQ=38) aaaaCCCGCCGGGGCGGGTTTTTTTACGTTGCTTAAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCAT‑CGGCGCGTTGTCGCATGCACGCAAGCCAAACTTCAGAATCCGAGTGTAaccacc > 2:98221/1‑149 (MQ=255) aaaaCCCGCCGGGGCGGGTTTTTTGACGTTGCTTCAGATTGCTCTGGGGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCAT‑CGGCGCGTCGTCACCTGCACGGAAGCTACACTTCGGATTACGACCGTAaccccc > 2:168195/1‑149 (MQ=255) ccgccgGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCAT‑CGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCAc > 2:17368/1‑149 (MQ=255) ccgccgGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCAT‑CGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCAc > 2:969001/1‑149 (MQ=255) cgccgGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTGAGTAAA‑AGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCaag > 1:737114/1‑147 (MQ=255) | TTATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAGTGGGGATACTACGGGTATAAAAAAACCCGCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCAT‑CGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACG > NC_000913_3_pae_pgi/3439442‑3439732 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |