| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_pae_pgi | 3,486,599 | C→A | H160Q (CAC→CAA) | crp → | cAMP‑activated global transcription factor, mediator of catabolite repression |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_pgi | 3,486,599 | 0 | C | A | 97.7% | 461.9 / 0.6 | 134 | H160Q (CAC→CAA) | crp | cAMP‑activated global transcription factor, mediator of catabolite repression |
| Reads supporting (aligned to +/- strand): ref base C (1/2); new base A (60/70); total (61/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.15e-01 | |||||||||||
Only 100 of 135 total aligned reads displayed.
CCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCAC > NC_000913_3_pae_pgi/3486450‑3486745 | gACATTCTGATGCGTTTGTCTGCACNGATGGCGCGTCGNCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCg > 3:781958/1‑150 (MQ=255) gACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCg > 1:1629763/1‑150 (MQ=255) tttGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAAt < 1:189484/150‑1 (MQ=255) gTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCaa < 3:626656/150‑1 (MQ=255) tCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCGGACGCTATGACTCAACCGGACGGTATGCAAATCaaa < 3:1029054/150‑1 (MQ=255) tGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAAt > 3:679594/1‑150 (MQ=255) gCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCGTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAAtt > 1:1264817/1‑150 (MQ=255) gCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAAtt > 1:614832/1‑150 (MQ=255) cacaGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTa > 1:1113496/1‑150 (MQ=255) acaGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTAc < 3:1010816/150‑1 (MQ=255) acaGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTAc < 2:708399/150‑1 (MQ=255) acaGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTAc > 2:321834/1‑150 (MQ=255) ggCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCa < 4:516236/150‑1 (MQ=255) ggCGCGTCGCCGGCAAGTCACTTCGGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCa < 2:572813/150‑1 (MQ=255) gcgcGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCACGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAg > 2:983531/1‑150 (MQ=255) gcgTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGa > 2:962314/1‑150 (MQ=255) gtcgtcTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGaaa < 2:211235/150‑1 (MQ=255) gtcTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTg < 1:1597205/150‑1 (MQ=255) cTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGt < 2:1455293/150‑1 (MQ=255) cTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTAccc < 3:815980/136‑1 (MQ=255) cTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTAccc > 4:815980/1‑136 (MQ=255) tGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTc > 2:1420739/1‑150 (MQ=255) gCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCa < 2:804794/150‑1 (MQ=255) gCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCa < 2:472055/150‑1 (MQ=255) cAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAg > 4:415946/1‑150 (MQ=255) aaGTCACTTCAGAGAAAGGGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGa < 2:753301/150‑1 (MQ=255) aGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGAt < 3:783996/150‑1 (MQ=255) gTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGAtt > 3:19167/1‑150 (MQ=255) tCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTg < 1:1109402/150‑1 (MQ=255) tCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTg > 2:1186486/1‑150 (MQ=255) ttCCGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCgg > 4:810496/1‑150 (MQ=255) tCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGc > 1:1277013/1‑150 (MQ=255) gagagAAAGGGGGCAAACTGGCGGTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCt < 4:781958/149‑1 (MQ=255) agagAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTg > 3:829451/1‑150 (MQ=255) gagaAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGt < 1:1145254/150‑1 (MQ=255) gagaAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGt > 3:554564/1‑150 (MQ=255) gagaAAGTGGGCAACCTGGCGTTCATCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGt > 2:1688305/1‑135 (MQ=255) gagaAAGTGGGCAACCTGGCGTTCATCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGt < 1:1688305/135‑1 (MQ=255) agaAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCGGATTGTCGGCTGtt < 1:962314/150‑1 (MQ=255) agaAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGtt > 1:920198/1‑150 (MQ=255) agaAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGAAAATCAAAATTACCCGCCAGGAAATTGGTCCGTTTGTCGGCTGtt < 4:406660/150‑1 (MQ=255) aaaGGGGGCAACCTGGCGTGCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTtct < 2:1020606/150‑1 (MQ=255) gTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGt > 1:112607/1‑150 (MQ=255) ggCAAGCTGGCGTTCCACGACGTGACGGGCCGCATTGCACAGGCGCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGACAGGAAATTGGACAGATTGTCGGCTGTTCACGTGaa > 4:518941/1‑150 (MQ=255) gCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGaaa > 1:1505954/1‑150 (MQ=255) aaCCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAAcc > 1:1555931/1‑150 (MQ=255) aaCCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGATGAATCTGCCAAAACAACAAGACGCAATGACTCATCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAAcc < 1:1429428/150‑1 (MQ=255) ccTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGt < 1:956596/150‑1 (MQ=255) ccTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGt < 1:797771/150‑1 (MQ=255) tGGCGTTCCTCGACCTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAATCGGACGGTATAAAAAACAAAATTAACAGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTgg < 2:396288/150‑1 (MQ=255) ccTCGGCGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCAt < 2:425817/150‑1 (MQ=255) cGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCt > 2:498749/1‑150 (MQ=255) aCGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGa < 2:614832/150‑1 (MQ=255) cGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGaa < 1:1671100/150‑1 (MQ=255) cGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGaa < 3:849284/150‑1 (MQ=255) cGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGaa < 2:1398131/150‑1 (MQ=255) cGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACAAGACGCTATGACTCAACAGGACGGCATGCAACTCAACATTCCCCCCCAGGAAATTGGTCAGCTGGTCTGCTGTGCGCGTGTAGCCGTGGGACTCATTCTGaa < 2:579646/150‑1 (MQ=255) cGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGc < 2:912797/150‑1 (MQ=255) ggCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGCCTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTg < 2:975499/150‑1 (MQ=255) ggCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTg < 4:554564/150‑1 (MQ=255) cGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTATCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGaa < 2:1079876/150‑1 (MQ=255) cGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGaa < 1:998389/150‑1 (MQ=255) ttGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATc < 3:901312/150‑1 (MQ=255) ttGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATc < 3:415946/150‑1 (MQ=255) cacaGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGaa < 1:42756/133‑1 (MQ=255) cacaGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGaa > 2:42756/1‑133 (MQ=255) cacaGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGa > 4:1026448/1‑150 (MQ=255) cacaGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGa > 4:1026540/1‑150 (MQ=255) cacaGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGa > 1:263995/1‑150 (MQ=255) acaGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGt > 1:46158/1‑55 (MQ=255) acaGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGt < 2:46158/55‑1 (MQ=255) acaGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGaa < 3:161127/150‑1 (MQ=255) acaGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGaa > 3:508523/1‑150 (MQ=255) caGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAAc < 3:521039/150‑1 (MQ=255) gACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCt < 4:679594/150‑1 (MQ=255) tctGCTGAATCTGGCAAAACAACCCGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGAt < 2:1264817/150‑1 (MQ=255) tctGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGAt < 2:1561239/150‑1 (MQ=255) tgctgAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGa > 4:509475/1‑136 (MQ=255) tgctgAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGAtct > 1:1341527/1‑150 (MQ=255) gctgAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTTGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGAtctc < 1:572403/150‑1 (MQ=255) gctgAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCACGTGCCCCAGTGCGATGCATTCTGAAGATGCTGGAAGATCAGAACCTGAtctc < 2:920198/150‑1 (MQ=255) gAATCTGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGc < 1:1186486/150‑1 (MQ=255) tCTGGCAAAACAACCAGACGCTATGAATCAACCGGACGGTATGCAAATCAAACTTACCCGCCCGGAAATTCGTCAGATTGTCGGCTGTTATCGTGACACCGTGGGACGCACTCTGAAGATGCTGGAAGGTCAGGACGTGATCTCCGcaca > 2:120559/1‑150 (MQ=255) tGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACg < 1:713910/150‑1 (MQ=255) tGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACg > 2:1426188/1‑150 (MQ=255) tGGCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACg > 1:124160/1‑150 (MQ=255) ggCAAAACAACCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACgg > 4:318227/1‑150 (MQ=255) aacCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCa > 3:917718/1‑150 (MQ=255) acCAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAAccct < 4:261125/150‑3 (MQ=255) ccAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCAtc < 2:433617/150‑1 (MQ=255) ccAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCAtc < 4:19167/150‑1 (MQ=255) ccAGACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCAtc > 4:259607/1‑150 (MQ=255) gACGCTATGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCAtcgtc < 1:1426188/150‑1 (MQ=255) tGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACg < 3:259607/150‑1 (MQ=255) tGACTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACg < 2:681134/150‑1 (MQ=255) aCTCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGc < 2:1113496/150‑1 (MQ=255) tCAACCGGACGGTATGCAAATCAAAATTACCCGTc > 2:185657/1‑35 (MQ=255) tCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTa > 2:688745/1‑144 (MQ=255) tCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTa < 1:688745/144‑1 (MQ=255) tCAACCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCAc > 4:100331/1‑150 (MQ=255) | CCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCAC > NC_000913_3_pae_pgi/3486450‑3486745 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |