| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_pgi | = 1207805 | 17 (0.220) | 50 (0.730) | 42/256 | 0.6 | 76.9% | coding (305/630 nt) | stfP | e14 prophage; uncharacterized protein |
| ? | NC_000913_3_pae_pgi | = 1209602 | 15 (0.220) | pseudogene (18/501 nt) | stfE | pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related | |||||
CACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGC > NC_000913_3_pae_pgi/1209454‑1209748 | gacGGAAATCAGGCAATTTATTGGTCGGATAAGCCTTTGGCAGTTCCGGGGATTCTTCAGCAGAAGAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAAACTGGACACCAACAGGTAA‑TGCagag < 2:766326/148‑1 (MQ=255) aCGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGc > 2:688347‑M2/1‑148 (MQ=255) aCGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGc > 1:288376‑M2/1‑148 (MQ=255) aCGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGCCCACGGAACCGGGACACCACCAGGTAA‑TGCAGAGc < 2:840411‑M2/149‑2 (MQ=255) aaTCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttct > 1:901026‑M2/1‑143 (MQ=255) tCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcc < 1:76930‑M2/149‑9 (MQ=255) ttatttGTCGGATAAGCCTTTTCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaagccaag > 2:505453‑M2/1‑132 (MQ=255) tttGTCGGATAAGCCTTTGCCAGTGCCGGGGATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGACTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGCGACCAACAGGGAA‑TGCCGGGccgtctccccaaacaagagt < 2:743503‑M2/149‑21 (MQ=255) tGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCAGGGAACCGGGACACCAACAGGTAA‑TGCAGAGCCTTCTCCCAAACCAACGTTTa < 2:1236929/149‑1 (MQ=255) tCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCCGGGCGGCTAAAGACCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGCCTTCTCCCAAACCAACATTTATg > 2:473980/1‑149 (MQ=255) cGGATAAGCCTCTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcga > 1:570424‑M2/1‑124 (MQ=255) gATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGGAGAGAAAGCGGCACCATTGCAGGCCAGCCAGTCGGCTCGCGGAATGGCTTAAGGCCACTGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgaga > 2:971397‑M2/1‑122 (MQ=255) tAAGCCTTTGCCAGTTCCGGGTATTCTTCCGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagc < 2:380627‑M2/149‑30 (MQ=255) tAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAAt < 1:469161/149‑1 (MQ=255) gCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCATGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgt < 1:236530‑M2/149‑33 (MQ=255) gCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgt > 1:24654‑M2/1‑117 (MQ=255) ccTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAATGGTTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtt < 2:1199075‑M2/149‑34 (MQ=255) ccTTTGCCAGTTCCGGGTATTCTTCAGCAAAAAAAGCGGCACCAATGCATGTCATCCAGCCTGTTGGCGGCGTGGCTGAAGGCCACAGAACCGGGACACCAACAGGTAA‑TACAGAGCCTTCTCCCCAACCAACGTTTATGAAAAGgaag > 1:1111351/1‑149 (MQ=255) tttGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCACAGccttctcccaaaccaaggttttcgcgacccgtggg < 2:858434‑M2/149‑36 (MQ=255) tGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAAt < 2:76930/149‑1 (MQ=255) ccAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcaca < 1:917058‑M2/149‑40 (MQ=255) ccAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCAAGCATGTTGGAGGAGTCGGTGAAAGCGCAGGCATGGGGACCTAAACAGGTAATTGAATATTC‑TATCGCAAACCAACGATAATGAAAATGAAGAAATaa > 2:1101809/1‑149 (MQ=255) aGTTCTGGGTATTCTTCCGCAGAAAAAGCGGCGCCATTGCATTTCCGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagt > 2:371837‑M2/1‑108 (MQ=255) cGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCaa > 2:721124/1‑149 (MQ=255) gggTACTCTTCAGCAGAGAGAGCGGCACCATTGCATTGCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCACCAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatc > 2:459827‑M2/1‑102 (MQ=255) tATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAAt < 1:44737/128‑1 (MQ=255) tATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAAt > 2:44737/1‑128 (MQ=255) cttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttg < 1:219576‑M2/149‑55 (MQ=255) ttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGcatca > 1:124137/1‑149 (MQ=255) agcagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatat < 2:812806‑M2/149‑59 (MQ=255) agcagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgaaagccgtttacacactccaatccgattgtggct < 2:71105‑M2/149‑59 (MQ=255) gcagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGtcttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatc < 1:298284‑M2/149‑60 (MQ=255) gcagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatc < 1:487493‑M2/149‑60 (MQ=255) aCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattct < 2:1281198‑M2/149‑74 (MQ=255) cATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttg > 2:293605‑M2/1‑74 (MQ=255) aTTGGATTTCGGGCAGCTTGGTGGCGGAGTGGCTGAAGGCCACGGAACCGTGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgc > 2:302716‑M2/1‑73 (MQ=255) ttGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcg < 1:1183740‑M2/149‑78 (MQ=255) ttGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAt > 2:656671/1‑149 (MQ=255) tGCATTTCAGCCAGCCTGTTGGCGGAGAGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttagagagccgtttgcaccgtgcaatccgatttgatctcgccaacaggagtgttgcgg < 2:865792‑M2/149‑79 (MQ=255) aTTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggctt < 1:1050978‑M2/149‑82 (MQ=255) aTTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttatttagaaccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggctt < 1:635968‑M2/149‑82 (MQ=255) tttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAAc > 1:440044/1‑149 (MQ=255) agccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcccagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagc > 1:858434‑M2/1‑59 (MQ=255) agccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagc < 1:145521‑M2/149‑91 (MQ=255) gTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCt < 1:411873/149‑1 (MQ=255) tGGCGGAGTGGCTGAAGGCCACGGAACAGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgagatcgccaaacggattcttgcggcttaacagcagcgcgcgaa > 1:840411‑M2/1‑52 (MQ=255) gCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcgcagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagg < 1:620485‑M2/149‑100 (MQ=255) gCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagt < 1:1046386‑M2/149‑100 (MQ=255) gAGTGGCTGAAGGCCACGGAACCGGGACAACAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcg < 1:320640‑M2/149‑103 (MQ=255) gTGGCTGAAGGCCACGGAACCGGTACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggt > 1:628933‑M2/1‑45 (MQ=255) gCTGAAGGCCACGGACCCGGGACACCAACAGGTAA‑TGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTAt < 1:1101809/149‑1 (MQ=255) gCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaccagcagggcgggaagtgcggtcag < 1:347826‑M2/149‑108 (MQ=255) gCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaag < 1:829357‑M2/149‑108 (MQ=255) cTGAAGGCCACGTAACCGGGACACCAATAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgacaagtgcggaaagt < 2:1296045‑M2/149‑109 (MQ=255) cTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATc < 1:354251/149‑1 (MQ=255) tGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgat < 1:1230583‑M2/91‑52 (MQ=255) tGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgat > 2:1230583‑M2/1‑40 (MQ=255) aaGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaac > 1:564566‑M2/1‑38 (MQ=255) ggCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactg > 2:1050978‑M2/1‑36 (MQ=255) gCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactgg > 2:487493‑M2/1‑35 (MQ=255) cACGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactcgtc < 2:227840‑M2/149‑117 (MQ=255) cGGAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgt > 1:1054327‑M2/1‑31 (MQ=255) gAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaagccaaggtttgcgagagccgtttgcacagtgccatccgatgtgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgc > 1:1255578‑M2/1‑29 (MQ=255) gAACCGGGACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgc > 2:1183740‑M2/1‑29 (MQ=255) gggACACCAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacaacagcgcgcgaagtgcagtacagaactggtcgtgccaccc < 2:127903‑M2/149‑126 (MQ=255) caaaccgtaa‑tgcAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctcc < 2:556873‑M2/143‑133 (MQ=255) cAACAGGTAA‑TGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattattgctgctaaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctcc < 1:965046‑M2/149‑133 (MQ=255) cAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccatgctggcaccg > 1:1281198‑M2/1‑5 (MQ=255) agagccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccacgctggcaccgg < 2:1085819‑M2/149‑146 (MQ=255) tggccttctcccaaacccaggttttcgagagccgtttgcacagtgccatccgagttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccgga > 2:1126304‑M2/3‑3 (MQ=255) gagtcttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccgga > 2:298284‑M2/1‑3 (MQ=255) | CACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAA‑TGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGC > NC_000913_3_pae_pgi/1209454‑1209748 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |