Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913_3_pae_pgi	3423732–3424234	3424545–3424238	5–814	30 [29]	[29] 30	[rrfD]–[rrlD]	[rrfD],[rrlD]

TCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGT  >  NC_000913_3_pae_pgi/3424506‑3424694                                         |                                                                                                                                                      tccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTaa                                          >  1:1148501/1‑149 (MQ=32) tccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTaa                                          >  1:1165906/1‑149 (MQ=32)   cGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCACGC‑GGGAGTACGGGTCAACGTTAGAACATCAAACATTAAAGGGGGGTATGTCAATGTCGTCTCCATTCTGACTGGCGTCCACACTTCTGAGc                                        >  1:444789/1‑149 (MQ=11)    gTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGcc                                       >  1:18946/1‑149 (MQ=32)       aCTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAGCC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTcc                                    <  1:579365/149‑1 (MQ=17)         tctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCa                                  >  2:968461/1‑149 (MQ=32)               ggaggaGACCGCCCCAGTGAAACTACCCACCAGACACTGT‑AGCGTCAGCGTAATACGCGTACGAGTTGGAGCATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGGTCACACTTCTAAGCCTCCCACCTATc                            >  1:1296517/1‑149 (MQ=2)               ggaggaGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATc                            >  1:253427/1‑149 (MQ=32)               ggaggaGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATc                            >  1:1083837/1‑149 (MQ=32)                gaggagACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTACGCCTCCCACCTATcc                           >  2:69304/1‑149 (MQ=17)                 aggagACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCt                          <  2:502210/149‑1 (MQ=32)                  ggagACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCtc                         <  2:230893/149‑2 (MQ=17)                   gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCtcc                        >  2:835758/1‑147 (MQ=17)                   gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTac                        >  2:644316/1‑149 (MQ=32)                     gcaccacccAGTCCAACTACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTacac                      <  2:914555/143‑1 (MQ=12)                      aCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTAcaca                     >  2:698985/1‑149 (MQ=32)                       ccGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACAt                    >  2:663201/1‑149 (MQ=32)                         gCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCa                  >  1:778259/1‑149 (MQ=32)                          ccccAGTCAAACTACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCaa                 >  2:771828/1‑149 (MQ=32)                           cccAGTCAAACTACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAg                >  1:772794/1‑149 (MQ=32)                            ccAGTCAAACTACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCTACACTTCTAAGCCTCCCACCTATCCTACACATCAAgg               >  1:176952/1‑149 (MQ=17)                            ccAGTCAAACTACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAgg               <  1:663201/149‑1 (MQ=32)                             cAGTCAAACTACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGGTCCATGCAGACTGGCGTCCACACGTATAAACCTCCCACCTATCCTACACATCAAGGc              >  1:460611/1‑149 (MQ=255)                                tCAAACTACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGc              <  2:1181889/146‑1 (MQ=32)                                tCAAACTACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGc              >  1:1181889/1‑146 (MQ=32)                                      tACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTc     >  1:939914/1‑149 (MQ=32)                                       aCCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCa    <  1:744074/149‑1 (MQ=32)                                        cccACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGGCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAg   <  2:1214269/149‑1 (MQ=17)                                        cccACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTCCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACCTCAAGGCTCAATGTTCaa   >  2:170421/1‑148 (MQ=17)                                         ccaccaGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgt  <  2:921750/149‑1 (MQ=32)                                         |                                                                                                                                                      TCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACC‑CGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGT  >  NC_000913_3_pae_pgi/3424506‑3424694

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑