| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_pae_pgi | 1,399,449 | G→T | S26R (AGC→AGA) | fnr ← | oxygen‑sensing anaerobic growth regulon transcriptional regulator FNR; autorepressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_pgi | 1,399,449 | 0 | G | T | 95.6% | 467.3 / 9.2 | 135 | S26R (AGC→AGA) | fnr | oxygen‑sensing anaerobic growth regulon transcriptional regulator FNR; autorepressor |
| Reads supporting (aligned to +/- strand): ref base G (2/4); new base T (61/68); total (63/72) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.85e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.56e-01 | |||||||||||
Only 100 of 137 total aligned reads displayed.
TACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGGCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGAGCAAGTAAGTCTAAG > NC_000913_3_pae_pgi/1399304‑1399594 | tACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGa > 4:391163/1‑150 (MQ=255) cGGAGCGGATGGCATAAAGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGAtgc < 3:212170/150‑1 (MQ=255) gAGCGGATGGCATAAAGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGAtgctg > 1:178055/1‑150 (MQ=255) gCATAAAGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTgg < 2:345736/150‑1 (MQ=255) ttatgATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATg < 2:651270/146‑1 (MQ=255) gCGATTTCTGTTCCTCACCAGCGTTAAACAGCGTCTAGTCTTTCTCTATACTATTGTTTCGGTTAATGTTATTAACAAGTTACTCTATCTCATGTTCGTTGAGTGTGATCGGGATGCGAAGCTGTCTGATGCTGCAATTCTGTCAATgta < 2:1620517/150‑3 (MQ=255) gCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGa > 1:287681/1‑150 (MQ=255) gCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGGCTGATGCTGCAATCCTgg < 4:232252/143‑1 (MQ=255) gCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGGCTGATGCTGCAATCCTgg > 3:232252/1‑143 (MQ=255) ttCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAAcc > 1:1305748/1‑150 (MQ=255) ttCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAAcc > 3:153072/1‑150 (MQ=255) cAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACt < 2:1651515/150‑1 (MQ=255) aaCAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGGCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATgcgc < 4:277413/150‑1 (MQ=255) cAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTTTCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGACCGCGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGTATAGCACAACCGCCAGACTGAATGCGCCg < 1:1023302/150‑1 (MQ=255) cAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCg > 1:1786521/1‑150 (MQ=255) cTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAAt < 2:1446911/150‑1 (MQ=255) gCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCg < 1:1153672/150‑1 (MQ=255) cTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCt > 3:363729/1‑150 (MQ=255) tttCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCtt > 2:487320/1‑150 (MQ=255) gAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAAt > 1:115201/1‑102 (MQ=255) gAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAAt < 2:115201/102‑1 (MQ=255) gAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCg < 2:287681/150‑1 (MQ=255) aaTAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCgg < 3:214268/150‑1 (MQ=255) aaTAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGGTCGTTGAGTGTGAACGGGATGCAAAGCTGGCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCgg < 3:771607/150‑1 (MQ=255) aTAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCggg < 2:178055/150‑1 (MQ=255) aGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGAt < 2:37762/150‑1 (MQ=255) gCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCa > 2:1205082/1‑150 (MQ=255) gCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCa > 2:222477/1‑150 (MQ=255) gCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCa > 3:7877/1‑150 (MQ=255) tcttcCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAg < 1:1469050/150‑1 (MQ=255) ttcCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGc < 3:544462/88‑1 (MQ=255) tcCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTc < 3:710969/150‑1 (MQ=255) cGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTg < 2:418648/150‑1 (MQ=255) gCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATGATAGGTCTGc > 1:1324204/1‑150 (MQ=255) gCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGc < 1:523728/150‑1 (MQ=255) gCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGc < 1:488715/150‑1 (MQ=255) tCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCATAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTc > 2:1354917/1‑150 (MQ=255) tCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGtat > 2:1419903/1‑119 (MQ=255) tCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGtat < 1:1419903/119‑1 (MQ=255) aaTGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGa > 1:1457649/1‑86 (MQ=255) aaTGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTGTAATTCGCTTTTCCGGGATCATAGGTCTGCTCaa > 3:1045831/1‑150 (MQ=255) aaTGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCaa > 2:817516/1‑150 (MQ=255) aaTGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGGCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCaa > 3:767338/1‑150 (MQ=255) tGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATa > 1:1694334/1‑137 (MQ=255) tGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGc > 2:1719773/1‑150 (MQ=255) atatTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCg < 2:1305748/150‑1 (MQ=255) ttatCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATa > 1:1377911/1‑81 (MQ=255) tatCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAAt > 2:1039068/1‑150 (MQ=255) atCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAAtt < 4:363729/150‑1 (MQ=255) atCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGCCTGCTCAAGCCGTAAtt < 3:661294/150‑1 (MQ=255) aGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACt > 2:966215/1‑91 (MQ=255) aGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACt < 1:966215/91‑1 (MQ=255) aGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGata < 1:817516/150‑1 (MQ=255) gCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGatat < 3:83351/150‑1 (MQ=255) gCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGatat < 3:385445/150‑1 (MQ=255) tGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGAtgctgc > 1:40748/1‑55 (MQ=255) tGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATAttt > 4:963884/1‑150 (MQ=255) tGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATAttt < 2:127150/150‑1 (MQ=255) aTCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGt > 2:735449/1‑150 (MQ=255) aTCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGt > 4:1076698/1‑150 (MQ=255) cAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTgg > 1:1519695/1‑59 (MQ=255) cAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTgg < 2:1519695/59‑1 (MQ=255) aTGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTaa < 1:977387/150‑1 (MQ=255) aTGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTaa < 4:48626/150‑1 (MQ=255) aTGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTaa > 1:1257969/1‑150 (MQ=255) tGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAAc < 3:1076698/150‑1 (MQ=255) gTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGc > 4:68655/1‑47 (MQ=255) gTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGc < 3:68655/47‑1 (MQ=255) gTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCaa < 2:846195/117‑1 (MQ=255) gTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCaa > 1:846195/1‑117 (MQ=255) gTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCtt > 1:1075833/1‑150 (MQ=255) ttGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCttt > 4:1020001/1‑150 (MQ=255) ttGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCttt < 2:1335892/150‑1 (MQ=255) tGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCtttt < 1:222477/150‑1 (MQ=255) gAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCttttt < 1:1039068/150‑1 (MQ=255) aGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTa < 1:41590/150‑1 (MQ=255) tgtgAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAgg < 1:238398/150‑1 (MQ=255) tgAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGa > 2:765168/1‑150 (MQ=255) tgAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGa > 2:1553331/1‑150 (MQ=255) gAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAAtt > 4:956563/1‑131 (MQ=255) gAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAAtt < 3:956563/131‑1 (MQ=255) gAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGAg > 3:388901/1‑150 (MQ=255) gAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGAg > 2:1160864/1‑150 (MQ=255) aaCGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGAGc < 1:1205082/150‑1 (MQ=255) cGGGATGCACAGCTGTCTGATGCTGCAATCCTGGAAATGGATAGCACACCCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGAGCaa < 4:751722/150‑1 (MQ=255) gATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAAcc < 2:1382878/48‑1 (MQ=255) gATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGAGCaagta < 4:706899/150‑1 (MQ=255) aTGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCATAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGAGCaagtaa < 1:1354917/150‑1 (MQ=255) aTGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGAGCaagtaa < 1:735482/150‑1 (MQ=255) aTGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGAGCaagtaa < 2:1257969/150‑1 (MQ=255) gCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGa > 1:512471/1‑51 (MQ=255) gCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGa < 2:512471/51‑1 (MQ=255) gCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGAGCaagtaagt > 3:180011/1‑150 (MQ=255) cAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGAGCAAGTAAGTc < 4:180011/150‑1 (MQ=255) cAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGAGCAAGTAAGTc > 2:1665410/1‑150 (MQ=255) aaaGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATCTGTCAATTTTAACATCTTTTTAGGGAGCAAGTAAGTCt > 3:254151/1‑150 (MQ=255) aGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGAGCAAGTAAGTCTaa < 1:1569059/150‑1 (MQ=255) aGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTCCCGGGATCATAGGTCCGCCCAAGCCGTAATTGATATTTGTCACTTTTAACATCTTTTTAGGGAGCAAGTACGTCTaa > 4:151558/1‑150 (MQ=255) gctgtctgATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTCACATCTTTTTAGGGAGCAAGTAAGTCTAAg < 2:926189/150‑1 (MQ=255) gctgtctgATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTATTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGAGCAAGTAAGTCTAAg > 3:71066/1‑150 (MQ=255) | TACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGGCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGAGCAAGTAAGTCTAAG > NC_000913_3_pae_pgi/1399304‑1399594 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |