| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_pae_pgi | 3,328,292 | Δ1 bp | coding (424/477 nt) | greA ← | transcript cleavage factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_pgi | 3,328,289 | 0 | T | . | 93.0% | 538.3 / 33.9 | 128 | coding (427/477 nt) | greA | transcript cleavage factor |
| Reads supporting (aligned to +/- strand): ref base T (6/3); new base . (62/57); total (68/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 138 total aligned reads displayed.
GAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATA‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCTGTTCTTCGTCAGAATCCAGATTCAGC > NC_000913_3_pae_pgi/3328141‑3328434 | gagaGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATA‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGtt < 2:98935/150‑1 (MQ=255) gagCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATA‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGtttg < 4:304204/150‑2 (MQ=255) agCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATA‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGtttga < 4:862008/150‑3 (MQ=255) gCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATA‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGtttgat < 3:473997/150‑4 (MQ=255) aaaaTGCCACGCTCTGTTCGTTGATAAAAGGCCGCATA‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTtgatga < 1:318618/150‑1 (MQ=255) ccACGCTCTGTTCGTTGATAAAAGGCCGCATA‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCacaa < 4:764616/150‑1 (MQ=255) aCGCTCTGTTCGTTGATAAAAGGCCGCATA‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTGATGACCacaac > 3:451237/1‑150 (MQ=255) aCGCTCTGTTCGTTGATAAAAGGCCGCATA‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCacaaca > 1:1631677/1‑150 (MQ=255) gTTCGTTGATAAAAGGCCGCATA‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCAtctt > 3:276008/1‑150 (MQ=255) ttCGTTGATAAAAGGCCGCATA‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCAtcttc < 1:639298/150‑1 (MQ=255) ttCGTTGATAAAAGGCCGCATA‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCAtcttc < 3:82936/150‑1 (MQ=255) ttCGTTGATAAAAGGCCGCATA‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCAtcttc > 4:848509/1‑150 (MQ=255) gTTGATAAAAGGCCGCATA‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCAtcttcttc > 2:1606554/1‑150 (MQ=255) gTTGATAAAAGGCCGCATA‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCAtcttcttc > 2:1365962/1‑150 (MQ=255) gTTGATAAAAGGCCGCATA‑GCGGCCTTTTTCCTTTCTTTACAATACAACAACATCTTGAGTATTGGGTAATTTTTACAGGTATTCAAACTTAATAACTTCAAATTCTACTTTGCCGCCCGGCG‑TTTGATGACCACAACATCAtcttcttc > 3:839746/1‑150 (MQ=255) aaaggaaaaaGGCCGCTAT‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCAtcttcttc > 3:530846/7‑150 (MQ=255) ttGATAAAAGGCCGCATA‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGttt < 3:69983/125‑1 (MQ=255) ttGATAAAAGGCCGCATA‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGttt > 4:69983/1‑125 (MQ=255) aTAAAAGGCCGCATA‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGtttgat < 4:512047/125‑4 (MQ=255) aTAAAAGGCCGCATA‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTACTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGtttgat > 3:512047/1‑122 (MQ=255) aaaaGGCCGCTAT‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTAATTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGcc > 3:354631/1‑150 (MQ=255) aaaGGCCGC‑TATGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCg > 1:190068/1‑150 (MQ=255) aaGGCCGCTAT‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGCCG‑TTTGATGACCACAACATCCTCTTCTTCTTTGCCGa > 2:1458322/1‑150 (MQ=255) ggCCGCATA‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATc < 3:128868/150‑1 (MQ=255) gCCGCATA‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCa < 1:1190364/150‑1 (MQ=255) gCATA‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACTTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATAAGGc > 2:1096620/1‑150 (MQ=255) tA‑GCGTCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCAc < 1:1284051/150‑1 (MQ=255) tA‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCAc < 1:419755/150‑1 (MQ=255) ccTTTTTTTTTTTTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCTCCCTTCGTTTT‑ATAACAATAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCaa > 2:395537/1‑150 (MQ=255) cTTTTTCTTTTCTTTACAATACATAAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTGATGACCACAACATCATCTTCTTCTTTGCCTATCAGGCCACGAGCaa > 2:547286/1‑150 (MQ=255) ttttCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGttt < 1:1609062/100‑1 (MQ=255) ttttCCTTTCTTTACAATACATAAACATCTTGAGTATTTAATAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCAGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACAAGCAATAg > 4:240802/1‑150 (MQ=255) ccTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGa < 2:537969/150‑1 (MQ=255) ctttctttACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAg < 3:920881/150‑1 (MQ=255) ctttctttACAATACATCAACATCTTGAGTATTGGGCAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAg > 4:526535/1‑150 (MQ=255) ctttACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTa < 1:1498365/150‑1 (MQ=255) ttACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACa < 2:1193513/150‑1 (MQ=255) tACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTtgat > 4:725929/1‑87 (MQ=255) tACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTtgat < 3:725929/87‑1 (MQ=255) aCATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTGCTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCa < 3:361086/150‑1 (MQ=255) aTCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAgg < 3:343555/131‑1 (MQ=255) aTCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAgg > 1:676101/1‑150 (MQ=255) aaCATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGttt > 1:869171/1‑150 (MQ=255) aCATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGCTCAGGGCGCGAGTGATGGTCGAGTTTACAGAAATCAGGtttt < 4:530846/150‑1 (MQ=255) cATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTg < 1:377849/150‑1 (MQ=255) tCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGtt > 3:346564/1‑150 (MQ=255) ttGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTa > 2:1325319/1‑150 (MQ=255) ttGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCACGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTa > 4:78478/1‑150 (MQ=255) tGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTaa > 4:345433/1‑150 (MQ=255) tGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTaa > 4:1007094/1‑150 (MQ=255) gAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGa > 2:1495362/1‑112 (MQ=255) gAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGa < 1:1495362/112‑1 (MQ=255) gAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTaaa < 4:346564/150‑1 (MQ=255) gAGTATTGGGCAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTaaa < 3:526535/150‑1 (MQ=255) aTTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCa < 3:689172/150‑1 (MQ=255) ttGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAAAATCATCTTATTCTTTGCCGCTAAGGCCACGAGAAATAGGCGAGTTTACCGAAATAAGGATTTGTTTAAAGTCAg > 1:1688585/1‑150 (MQ=255) ggTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCtt > 4:3399/1‑150 (MQ=255) gTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTc < 2:869171/150‑1 (MQ=255) aaTTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGt < 1:1142526/150‑1 (MQ=255) ttCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATa > 3:142709/1‑105 (MQ=255) ttCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATa < 4:142709/105‑1 (MQ=255) cTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATc < 1:351938/150‑1 (MQ=255) cTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATc < 4:276008/150‑1 (MQ=255) cTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATc > 1:1491491/1‑150 (MQ=255) ttACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCg > 4:419257/1‑150 (MQ=255) gTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACg < 4:772839/150‑1 (MQ=255) ttCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGTCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATg < 1:1023760/150‑1 (MQ=255) ttCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATg > 3:202585/1‑150 (MQ=255) ccACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCg < 1:601000/150‑1 (MQ=255) ccTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATa > 4:315362/1‑150 (MQ=255) ttAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAg > 1:1170571/1‑150 (MQ=255) ttAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAg > 1:3179/1‑150 (MQ=255) tAATTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGt < 2:262471/150‑1 (MQ=255) aTTACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCt < 1:1365962/150‑1 (MQ=255) tACTTCAAATTCTACTTCGCCGCCCGGCGTTTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCTg < 4:451237/150‑1 (MQ=255) tACTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCTGt < 2:839147/150‑1 (MQ=255) aCTTCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCTGtt > 2:1449145/1‑150 (MQ=255) ttCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGa < 4:413921/138‑1 (MQ=255) ttCAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCTGttct > 2:1242454/1‑150 (MQ=255) cAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCTGttcttc > 2:446680/1‑150 (MQ=255) cAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCTGttcttc > 1:339228/1‑150 (MQ=255) cAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCTGttcttc > 4:20320/1‑150 (MQ=255) cAAATTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGATTACCGACAACAGCTTCTGTTTAAACTCACCTTAGTCCTCGACAACGATGCGCTAAGTCTGttcttc > 1:1003655/1‑150 (MQ=255) aaTTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCTGTTCTTCGt < 2:3179/150‑1 (MQ=255) aaTTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCTGTTCTTCGt > 4:229699/1‑150 (MQ=255) aTTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCTGTTCTTCGTc < 1:537814/150‑1 (MQ=255) aTTCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCTGTTCTTCGTc < 2:190068/150‑1 (MQ=255) ttCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCTGTTCTTCGTCa < 1:696028/150‑1 (MQ=255) ttCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCTGTTCTTCGTCa < 4:1036347/150‑1 (MQ=255) tCTACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCTGTTCTTCGTCAg > 1:798817/1‑150 (MQ=255) tACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTaaa > 1:517690/1‑101 (MQ=255) tACTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCTGTTCTTCGTCAGaa < 2:1321362/150‑1 (MQ=255) cTTCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGAGGCGATAAGTCTGTTCTTCGTCAGAATc > 2:778230/1‑150 (MQ=255) ttCGCCGCCCGGCG‑TTTGCTGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCTGTTCTTCGTCAGAATcc > 1:23157/1‑150 (MQ=255) ttCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCTGTTCTTCGTCAGAATcc > 1:125618/1‑150 (MQ=255) ttCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCTGTTCTTCGTCAGAATcc > 2:1076942/1‑150 (MQ=255) ttCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCTGTTCTTCGTCAGAATcc < 1:1325319/150‑1 (MQ=255) tCGCCGCCCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCTGTTCTTCGTCAGAATCCa < 2:1516772/150‑1 (MQ=255) gccgccCGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCTGTTCTTCGTCAGAATCCAGa < 1:1076942/150‑1 (MQ=255) cGGCG‑TTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCTGTTCTTCGTCAGAATCCAGATTCAGc > 1:1400500/1‑150 (MQ=255) | GAGAGCAAAATGCCACGCTCTGTTCGTTGATAAAAGGCCGCATA‑GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATAGGCGAGTTTACAGAAATCAGGTTTTGTTTAAAGTCAGCTTCGTCATCGCCAACGATGCGATAAGTCTGTTCTTCGTCAGAATCCAGATTCAGC > NC_000913_3_pae_pgi/3328141‑3328434 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |