| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_pgi | = 3584194 | NA (NA) | 76 (0.920) | 63/250 | 0.4 | 91.6% | intergenic (+14/‑2) | insB1/yrhA | IS1 transposase B/pseudogene, interrupted by IS1E |
| ? | NC_000913_3_pae_pgi | 3993088 = | 7 (0.080) | coding (1936/2547 nt) | cyaA | adenylate cyclase | |||||
Only 100 of 182 total aligned reads displayed.
TGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGA > NC_000913_3_pae_pgi/3992939‑3993224 | cgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacc < 3:352914‑M2/1‑1 (MQ=255) gaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCt < 2:267679‑M2/2‑1 (MQ=255) tgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTgcgc < 1:930859‑M2/6‑1 (MQ=255) gagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGcgcg > 3:160027‑M2/144‑150 (MQ=255) aCCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGcgcg > 2:966525/1‑150 (MQ=255) cggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCt < 4:178167‑M2/10‑1 (MQ=255) cAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTg > 3:582524‑M2/1‑149 (MQ=255) gcataacctgaatctgaggcagcacctggcacggctgggacggaagacgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTa > 1:664274‑M2/139‑150 (MQ=255) taacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAAtt > 3:185492‑M2/136‑150 (MQ=255) tCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtga < 4:368490‑M2/150‑6 (MQ=255) aacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTc > 3:152551‑M2/135‑150 (MQ=255) aacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTc < 2:875292‑M2/16‑1 (MQ=255) aacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTc < 2:768425‑M2/16‑1 (MQ=255) ctgaatctgaggcagcacgtggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgcacataaaacactatcaataagttggagtcattacTTGCGCGGCTTAATTCGTa > 2:637960‑M2/132‑150 (MQ=255) aaCGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgc > 1:272285‑M2/1‑139 (MQ=255) aCGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgcc < 1:335542‑M2/150‑13 (MQ=255) aggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCACGGCTTAATTCGTACTCGCGTgc > 2:574956‑M2/123‑150 (MQ=255) gcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTgcag < 4:160027‑M2/30‑1 (MQ=255) cGTACGCTGCACTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgc < 3:517085‑M2/141‑12 (MQ=255) cagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTgcagc < 3:480500‑M2/31‑1 (MQ=255) agcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTgcagca > 3:316554‑M2/119‑150 (MQ=255) cTGCACTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgattta > 1:1020158‑M2/1‑124 (MQ=255) gcacggctgggacggaagccgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGttt < 1:527215‑M2/40‑1 (MQ=255) aCTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgt > 1:295255‑M2/1‑120 (MQ=255) acggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcataagGTGCGCGGGCAAAGTCGTAGTCGCGTGCAGCAACTGGTTTCt > 1:460021‑M2/109‑150 (MQ=255) ggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGa < 2:311163‑M2/44‑1 (MQ=255) cAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGGAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatga > 4:476811‑M2/1‑116 (MQ=255) aCGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatg > 3:368490‑M2/1‑114 (MQ=255) gCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTTGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttac < 4:226298‑M2/130‑20 (MQ=255) gCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtg < 4:189187‑M2/150‑40 (MQ=255) gCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagt > 1:323219‑M2/1‑111 (MQ=255) aTCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttga > 3:233411‑M2/1‑104 (MQ=255) tCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCATATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag > 1:741759‑M2/1‑103 (MQ=255) gatgatCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatg < 1:812158‑M2/137‑37 (MQ=255) gatgatCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatg > 2:812158‑M2/1‑101 (MQ=255) cgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCg < 2:353854‑M2/59‑1 (MQ=255) atCGAAGCCCTGAAAGCTATTCTCGGCAAAATGCATCAGGATGCCGCTCCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctc > 2:765665‑M2/1‑97 (MQ=255) tcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCttt < 1:551811‑M2/64‑1 (MQ=255) gttctcaaaatcggcggagctgcatgacaaagtcatcgggcattatctgaacataaaacaccatcaagaagttggagtcattacTTGCGCGGCTTACTTCGTACTCGCGTGCAGCAACTGGCTTCTGAGAGAAATGAATCGCGTCTTTcc > 4:118536‑M2/85‑150 (MQ=255) tagCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagt > 2:649599‑M2/2‑93 (MQ=255) aaGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagt < 1:865460‑M2/150‑58 (MQ=255) aaGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagt > 4:52088‑M2/1‑93 (MQ=255) aaGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagt < 1:649599‑M2/121‑29 (MQ=255) tcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCa > 4:335151‑M2/81‑150 (MQ=255) tGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttc < 3:495260‑M2/150‑64 (MQ=255) aCTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttt > 1:622940‑M2/1‑82 (MQ=255) ttCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaactta > 1:2002‑M2/1‑78 (MQ=255) tcGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgc < 1:653120‑M2/126‑52 (MQ=255) gcatgacaaattcatcggtcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCtt < 4:119113‑M2/63‑1 (MQ=255) gcatgacaaattcatcggtcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCtt > 3:119113‑M2/64‑126 (MQ=255) catgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTc > 1:281189‑M2/63‑78 (MQ=255) aaaaaTGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCt < 4:54890/70‑1 (MQ=255) aaaaaTGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCt > 3:54890/2‑71 (MQ=255) aaaTGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtcc > 3:224000‑M2/1‑69 (MQ=255) acaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCg > 1:100292‑M2/59‑132 (MQ=255) acaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCg < 2:100292‑M2/74‑1 (MQ=255) caaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGa < 1:716440‑M2/44‑1 (MQ=255) aTGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccct > 2:656255‑M2/1‑67 (MQ=255) tGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctc > 1:562481‑M2/1‑66 (MQ=255) tGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctc > 4:495260‑M2/1‑66 (MQ=255) gCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcc < 2:1022934‑M2/150‑86 (MQ=255) aTCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctg > 3:189187‑M2/1‑63 (MQ=255) gggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTgc < 3:290703‑M2/103‑1 (MQ=255) ggcattatctgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTgca > 4:275673‑M2/47‑75 (MQ=255) gcACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgccccagtggcttctgtttctatcagctgtccctcctgttccgctactg < 1:142577‑M2/150‑99 (MQ=255) cACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactga < 2:258754‑M2/150‑100 (MQ=255) atctgaacataaaacactatcaataagttggagtcattacCTGCATGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTc < 1:574956‑M2/110‑1 (MQ=255) aCCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtgg > 2:234297‑M2/1‑50 (MQ=255) tgaacataaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTc > 1:296729‑M2/38‑98 (MQ=255) ccAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgc > 1:352137‑M2/1‑46 (MQ=255) ccAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgc < 2:352137‑M2/97‑52 (MQ=255) ccAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgattta < 3:219359‑M2/72‑27 (MQ=255) aTAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctc > 2:323829‑M2/1‑42 (MQ=255) tAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtg > 1:258754‑M2/1‑41 (MQ=255) aaaacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAAcc > 2:295349‑M2/31‑150 (MQ=255) gCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggt > 2:155324‑M2/1‑39 (MQ=255) gCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggt < 1:155324‑M2/144‑106 (MQ=255) cGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagt < 1:812036‑M2/95‑58 (MQ=255) aacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCt < 3:304072‑M2/42‑1 (MQ=255) aacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCt > 4:304072‑M2/29‑70 (MQ=255) aacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTc < 1:336020‑M2/65‑1 (MQ=255) aacactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTc > 2:336020‑M2/29‑93 (MQ=255) acactatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTgg < 2:280102‑M2/123‑1 (MQ=255) tGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtg > 2:561267‑M2/1‑36 (MQ=255) tatcaataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGgt > 1:507075‑M2/24‑150 (MQ=255) aaGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacgg < 1:887810‑M2/150‑118 (MQ=255) aGTCTTCTGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggc > 4:579928‑M2/1‑32 (MQ=255) tcttctGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt > 2:990609‑M2/1‑30 (MQ=255) tcttctGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt < 1:990609‑M2/97‑68 (MQ=255) aataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAgtgt < 4:223970‑M2/48‑1 (MQ=255) ttctGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaa < 3:569648‑M2/150‑123 (MQ=255) ataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTgggg < 3:414489‑M2/125‑1 (MQ=255) ataagttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTgggg > 4:414489‑M2/19‑143 (MQ=255) ctGTTATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcag > 2:724610‑M2/1‑26 (MQ=255) agttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTgg < 2:461923‑M2/123‑1 (MQ=255) agttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTgg > 1:461923‑M2/16‑138 (MQ=255) gttggagtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCg > 2:847711‑M2/15‑150 (MQ=255) ttATAGCCAGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcag > 2:645481‑M2/1‑23 (MQ=255) gtcattacCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTg > 2:70280‑M2/9‑120 (MQ=255) aGCATCTGCGCGGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttca < 2:898935‑M2/106‑92 (MQ=255) | TGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGA > NC_000913_3_pae_pgi/3992939‑3993224 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |