New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA = 234720063 (1.480)5 (0.120) 5/280 5.4 7.1% noncoding (41/203 nt) REP164 (repetitive extragenic palindromic) element; contains 5 REP sequences REP164 (repetitive extragenic palindromic) element; contains 5 REP sequences
?NC_000913_3_hsa_tpiA = 2347271 70 (1.680)noncoding (112/203 nt) REP164 (repetitive extragenic palindromic) element; contains 5 REP sequences REP164 (repetitive extragenic palindromic) element; contains 5 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TATTATCAGAACACCCGTGACGGCGCTGAAGACGCACAAGACGATCTGGTGCCGTCAATCCAGGACGATGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGC  >  NC_000913_3_hsa_tpiA/2347052‑2347348
                                                                                                                                                    |                                                                                                                                                    
tattatCAGAACACCCGTGACGGCGCTGAAGACGCACAAGACGATCTGGTGCCGTCAATCCAGGACGATGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCgg                                                                                                                                                      >  2:699917/1‑149 (MQ=255)
tattatCAGAACACCCGTGACGGCGCTGAAGACGCACAAGACGATCTGGTGCCGTCAATCCAGGACGATGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGGCGCgg                                                                                                                                                      >  2:380923/1‑149 (MQ=255)
  ttatCAGAACACCCGTGACGCCGCTGAAGACGCACAAGACGATCCGGTGCCGTCAATCCAGGACGATGGCTGCGAAAGCGGCGCATGTAACATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGtt                                                                                                                                                    <  1:77262/149‑1 (MQ=255)
     tCAGAACACCCGTGACGGCGCTGAAGACGCACAAGACGATCTGGTGCCGTCAATCCAGGACGATGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTCCGGCTCGGTTTGt                                                                                                                                                 >  2:604792/1‑149 (MQ=255)
         aaCACCCGTGACGGCGCTGAAGACGCACAAGACGATCTGGTGCCGTCAATCCAGGACGATGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGc                                                                                                                                             <  1:699917/149‑1 (MQ=255)
         aaCACCCGTGACGGCGCTGAAGACGCACAAGACGATCTGGTGCCGCCAACCCAAGACGATGTCTCCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACACCTTATCCGGCCTACGCCTCGGTTTGTAGGc                                                                                                                                             >  2:124910/1‑149 (MQ=39)
              ccGTGACGGCGCTGAAGACGCACAAGACGATCTGGTGCCGTCAATCCAGGACGATGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGGTGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGAt                                                                                                                                        >  1:314601/1‑149 (MQ=255)
              ccGTGACGGCGCTGAAGACGCACAAGACGATCTGGTGCCGTCAATCCAGGACGATGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGAt                                                                                                                                        >  2:139450/1‑149 (MQ=255)
              ccGTGACGGCGCTGAAGACGCACAAGACGATCTGGTGCCGTCAATCCAGGACGATGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGAt                                                                                                                                        >  1:314628/1‑149 (MQ=255)
                        gcTGAAGACGCACAAGACGATCTGGTGCCGTCAATCCAGGACGATGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGcc                                                                                                                              >  2:138109/1‑149 (MQ=255)
                               aCGCACAAGACGATCTGGTGCCGTCAATCCAGGACGATGGTTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCg                                                                                                                       >  1:403957/1‑149 (MQ=255)
                                   acaAGACGATCTGGTGCCGTCAATCCAGGACGATGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATc                                                                                                                   <  2:266836/149‑1 (MQ=255)
                                       gACGATCTGGTGCCGTCAATCCAGGACGATGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGc                                                                                                               >  1:612751/1‑149 (MQ=255)
                                           aTCTGGTGCCGTCAATCCAGGACGATGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGATCACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCg                                                                                                           <  1:147413/149‑1 (MQ=255)
                                            tCTGGTGCCGGCAATCCAGGACGATGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCgg                                                                                                          <  1:535411/149‑1 (MQ=255)
                                              tGGTGCCGTCAATCCAGGACGATGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGAACCAGCGTCGCATCAGGCTCCggct                                                                                                        >  2:646844/1‑147 (MQ=255)
                                                gTGGCGTCAAGCAAGGACGAGGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGc                                                                                                      <  2:459178/149‑1 (MQ=25)
                                                   ccGTCAATCCAGGACGATGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCgg                                                                                                   >  2:632305/1‑149 (MQ=255)
                                                    cGTCAATCCAGGACGATGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGGTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCCGCGTCGCATCCGGCTCCGGGTGCCggc                                                                                                  >  2:636650/1‑148 (MQ=255)
                                                     gTCAATCCAGGACGATGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGAt                                                                                                                                        >  2:619722/1‑110 (MQ=255)
                                                     gTCAATCCAGGACGATGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGAt                                                                                                                                        <  1:619722/110‑1 (MQ=255)
                                                     gTCAATCCAGGACGATGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGAt                                                                                                 <  1:112695/149‑1 (MQ=255)
                                                     gTCAATCCAGGACGAGGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGAt                                                                                                 <  2:332451/149‑1 (MQ=255)
                                                        aaTCCAGGGCGGTGGCGGCGAAAGCGGCCCATGTAAGATCTGATATTGCGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATCAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCa                                                                                              <  2:46071/149‑1 (MQ=25)
                                                        aaTCCAGGACGATGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCa                                                                                              <  1:513910/149‑1 (MQ=255)
                                                        aaTCCAGGACGATGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCa                                                                                              >  2:583438/1‑149 (MQ=255)
                                                        aaTCCAGGACGAGGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCa                                                                                              <  1:514066/149‑1 (MQ=255)
                                                             aGGACGATGGCTGCGAAAGCGGCGCATGTAAGATATGATAATGAGGGGCCTGATGCGTCGAAAGCGCCTTATCCGGCCTACGGCCCGGTTTGTAGGCATGATAAGACGCACACGCGGCGGATCAGGCTCCGGGAGCGGGAGCCAGCggg                                                                                         >  2:195040/1‑147 (MQ=19)
                                                             aGGACAAGGGCTGCGAAACCGCCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACCGGGCGCCGGATGCAGCGTg                                                                                         >  2:734785/1‑149 (MQ=25)
                                                               gacgacGGCTGCGAAAGCGGCGCATGTAAGATCGGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGaa                                                                                       <  1:454648/149‑1 (MQ=255)
                                                                      gCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCGGCGTCGCATCAGGCTCCGGGTGCCGGCTGCAGCGTGAACGCCTTa                                                                                >  1:13007/1‑149 (MQ=255)
                                                                       cTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTAt                                                                               <  2:271370/149‑1 (MQ=255)
                                                                          cGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGCCGGGTGCCGGATGGAGCGTGAACGCCTTATCCg                                                                            >  1:609909/1‑149 (MQ=255)
                                                                              aGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCt                                                                        >  1:46875/1‑149 (MQ=255)
                                                                                  gcgcATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAAAGCCTTATCCGGCCTACgg                                                                    >  1:755591/1‑149 (MQ=255)
                                                                                   cgcATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGc                                                                   >  1:346016/1‑149 (MQ=255)
                                                                                     gaTGTAAGATGTTAATTTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTc                                                                 <  1:356643/148‑1 (MQ=255)
                                                                                      aTGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCg                                                                >  2:163561/1‑149 (MQ=255)
                                                                                       tGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAGCTCGCATTGTAGGCGTGATCACCATCGCCAGCGTCGCATCAGGCCCCGGGTGCCGAATGCAACGTGGACGCCTTATCCGGCCTACGGCGCgg                                                               >  1:746462/1‑149 (MQ=25)
                                                                                         tAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCACCAACGCATCCAGCTCCGGGGGCCGCAGCCAGCCAGAACGCCTTATCGAGCCTCCGCCCCGGag                                                             >  2:649897/1‑148 (MQ=18)
                                                                                           aGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGAttt                                                           <  1:384062/149‑1 (MQ=255)
                                                                                             aTCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGt                                                         <  1:163561/149‑1 (MQ=255)
                                                                                                tGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAgg                                                      >  2:280782/1‑149 (MQ=255)
                                                                                                 gATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGc                                                     >  2:196391/1‑149 (MQ=255)
                                                                                                 gATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGc                                                     >  2:592707/1‑149 (MQ=255)
                                                                                                   tatTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCCCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGCAGCAGCGTGAACGCCTTATCCGGCCTACGGCCCGGATTTATAGCCCt                                                   >  2:295987/1‑149 (MQ=25)
                                                                                                   tatTGAGATGCCGCATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCt                                                   <  2:141239/149‑1 (MQ=255)
                                                                                                     ttGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGa                                                 <  1:280782/149‑1 (MQ=255)
                                                                                                      ggagaGGCCGGAGGCGGAGTAAACGCCTTATCCGGCCTACGGCGCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAAAGCATTAAGGTGCCTACGGCTCGGATTTGTAGGCCTGAt                                                <  2:732177/148‑1 (MQ=25)
                                                                                                        agaTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATaa                                              <  1:229757/149‑1 (MQ=255)
                                                                                                        agaTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATaa                                              <  1:382287/149‑1 (MQ=255)
                                                                                                             ccGGACGCGGCGTAAACGCCTTATCCGGCCTACGGCTCTGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGTATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGAcgc                                         <  2:521766/149‑1 (MQ=255)
                                                                                                                 aTGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCa                                     >  2:250460/1‑149 (MQ=255)
                                                                                                                   gcggcgTAAACGCCTTATTGTGCCTACGGCTCGGTTTTTAGGCCTGATAAGACGCGCTAGCGTCGCATCAGGCCCCGGGTGCCGGATGTAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGc                                   <  2:115580/149‑1 (MQ=37)
                                                                                                                   gcggcgTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGTTGTCTGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGc                                   <  2:651023/149‑1 (MQ=255)
                                                                                                                        gTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGCCCTCCGGCTCGGATTTGTAGGCCTGAGTAAACGCGCCAGCGTCGc                              >  1:453748/1‑149 (MQ=37)
                                                                                                                           aaCGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCCGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATc                           <  2:422582/149‑1 (MQ=255)
                                                                                                                                cTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGTCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGca                      <  1:499712/149‑1 (MQ=255)
                                                                                                                                        gCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATgc              <  1:250460/149‑1 (MQ=255)
                                                                                                                                          cTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATgcgg            >  1:399543/1‑149 (MQ=255)
                                                                                                                                           tACGGCTCGGTTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAAGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCTCCAGCGTCGCATCAGGCGCAGGAttaggc           >  1:647803/1‑144 (MQ=25)
                                                                                                                                               gCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTaa       >  1:466416/1‑149 (MQ=255)
                                                                                                                                                 tCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTaaaa     <  1:718879/149‑1 (MQ=255)
                                                                                                                                                  cGGGTTGTACGGCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAAt    <  1:362810/149‑1 (MQ=255)
                                                                                                                                                    gTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGc  >  1:457856/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TATTATCAGAACACCCGTGACGGCGCTGAAGACGCACAAGACGATCTGGTGCCGTCAATCCAGGACGATGGCTGCGAAAGCGGCGCATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGC  >  NC_000913_3_hsa_tpiA/2347052‑2347348

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.