New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA = 461231043 (0.870)4 (0.090) 4/260 6.6 9.1% intergenic (+39/‑83) ytjA/yjjU uncharacterized protein/putative patatin‑like family phospholipase
?NC_000913_3_hsa_tpiA = 4612313 40 (0.880)intergenic (+42/‑80) ytjA/yjjU uncharacterized protein/putative patatin‑like family phospholipase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTGGGTTTGGTGGTCTGGCCGGTACCGCTGCAGGCGCAGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCTAAGGCCGTTCCAGCCT  >  NC_000913_3_hsa_tpiA/4612162‑4612458
                                                                                                                                                    |                                                                                                                                                     
ttGGGTTTGGTGGTCTGGCCGGTACCGCTGCAGGCGCAGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTcc                                                                                                                                                       >  1:868862/1‑149 (MQ=255)
  gggTTTGGTGGTCTGGCCGGTACCGCTGCAGGCGCAGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAg                                                                                                                                                     >  1:360697/1‑149 (MQ=255)
         gtggtCTGGCCGGTACCGCTGCAGGCGCAGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGCAAATTTTATCCAAAGCCGGTCCACCGGACTg                                                                                                                                             >  2:346498/1‑149 (MQ=255)
         gtggtCTGGCCGGTACCGCTGCAGGCGCAGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTg                                                                                                                                             <  1:530760/149‑1 (MQ=255)
           ggtCTGGCCGGTACCGCTGCAGGCGCAGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTGGc                                                                                                                                           <  1:437854/149‑1 (MQ=255)
                     gtacgcgtGCAGGCGCAGCGAAAATTGTGTTTGTCGTCGGGATAATTCTGTCCCTGGTTAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGtt                                                                                                                                 <  2:382518/142‑1 (MQ=255)
                       aCCGCTGCAGGCGCAGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGtttt                                                                                                                               >  2:564244/1‑149 (MQ=255)
                        ccGGTGCAGTCGCAGCTAAAACTGTCGTTGTCGTCGGGATTATTCTGGTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTa                                                                                                                              <  2:742416/149‑1 (MQ=255)
                          gCTGCAGGCGCAGCTAAAATTGTCTTTGTCGTCGGTATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGc                                                                                                                            <  1:739750/149‑1 (MQ=255)
                             gCAGGCGCAGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGaa                                                                                                                         <  2:677544/149‑1 (MQ=255)
                                      gCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAAtt                                                                                                                <  1:325184/149‑1 (MQ=255)
                                       cTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGtt                                                                                                                                 >  2:161539/1‑131 (MQ=255)
                                       cTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGtt                                                                                                                                 <  1:161539/131‑1 (MQ=255)
                                           aaTTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGtt                                                                                                           >  2:113529/1‑149 (MQ=255)
                                                          cgGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCttt                                                                                            <  2:503100/149‑1 (MQ=255)
                                                               ttactCTGTTCCTGGTCAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTCGCTTTTGTGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCccaa                                                                                       <  2:293157/149‑1 (MQ=255)
                                                                tattCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCacaac                                                                                      <  2:659510/149‑1 (MQ=255)
                                                                     tgagtcTGGTGAGTTTGTTCATGGGCCGAAAACTACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTGCACAACaaaaa                                                                                 <  1:408904/144‑1 (MQ=255)
                                                                     tGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACaaaaa                                                                                 >  1:72549/1‑149 (MQ=255)
                                                                       ttCCTGGGTAGTGTAGTCAGGTGCCGAAAGCGACCCTAGATGTCAGACCATTAAGAAAATTTTATCCAGAGCCAGCCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATCATATATTGCGTTACTTTGTCATTCTTTCACAACAAAAACa                                                                               <  2:60484/149‑1 (MQ=255)
                                                                            ggTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAg                                                                          <  1:113529/149‑1 (MQ=255)
                                                                            ggTGAGTTTGGTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGCACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAg                                                                          <  1:404528/149‑1 (MQ=255)
                                                                                     gTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAAATTTATGCAAAGCAAATCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTg                                                                 >  1:124815/1‑149 (MQ=255)
                                                                                      ttCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGATgg                                                                >  2:81615/1‑149 (MQ=255)
                                                                                          tGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTACGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCa                                                            >  1:850831/1‑149 (MQ=255)
                                                                                               cGAAAACGCCCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGaa                                                       <  1:182666/149‑1 (MQ=255)
                                                                                                           tAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGc                                           >  1:422537/1‑149 (MQ=255)
                                                                                                                   aGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAat                                   >  2:717166/1‑149 (MQ=255)
                                                                                                                       cATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAAAGCTTGGTAATATTg                               >  2:207094/1‑149 (MQ=255)
                                                                                                                              aaaaTTTGATCCAAAGCCAGTCCAGCGGACTGGCTTATGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGtt                        <  2:258536/149‑1 (MQ=255)
                                                                                                                                aaTTTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGa                                                                            <  2:380619/95‑1 (MQ=255)
                                                                                                                                aaTTTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGa                                                                            >  1:380619/1‑95 (MQ=255)
                                                                                                                                         cAAAGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCCTTCTTTCCCAACAACCTCAGGGAGGCAGAGTTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCCAAGGc             >  2:531894/1‑149 (MQ=255)
                                                                                                                                         cAAAGCCAGTCCAGCGGACTGGCTTTTGCAACTCAAGCGTATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCTAAGGc             >  1:429112/1‑149 (MQ=255)
                                                                                                                                          aaaGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCAGAACAAAAAAAGGAAGGCAGAGGTGGGGAAGCGAATACCTGTAACGCCTGGGAATATTTGGCAGTTATAGCTaatgac            >  2:332151/1‑145 (MQ=255)
                                                                                                                                          aaaGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTg                                                                 <  2:233065/96‑1 (MQ=255)
                                                                                                                                          aaaGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTg                                                                 >  1:233065/1‑96 (MQ=255)
                                                                                                                                          aaaGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCTAAGGcc            >  1:702836/1‑149 (MQ=255)
                                                                                                                                            aGCCAGTCCGCTGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTGGGTAATATTTCGCCGTTGTCGCTAAGGCCGt          >  2:441053/1‑149 (MQ=255)
                                                                                                                                            aGCCAGTCCGCTGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCAGTCTTTCACAACAAAAACAGGAAGGCAGTGGTGGGGAAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCTAAGGCCGt          >  2:441060/1‑149 (MQ=255)
                                                                                                                                              ccAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGaa                                                                           >  2:756209/1‑82 (MQ=255)
                                                                                                                                              ccAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGaa                                                                           <  1:756209/82‑1 (MQ=255)
                                                                                                                                                 gTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCTAAGGCCGTTCCAg     <  2:702836/149‑1 (MQ=255)
                                                                                                                                                    cAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCTAAGGCCGTTCCAGCCt  <  1:482168/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
TTGGGTTTGGTGGTCTGGCCGGTACCGCTGCAGGCGCAGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGCGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCTAAGGCCGTTCCAGCCT  >  NC_000913_3_hsa_tpiA/4612162‑4612458

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.