New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	2811348 =	40 (0.810)	4 (0.090)	4/264	6.6	9.2%	intergenic (+48/‑79)	mprA/emrA	transcriptional repressor of microcin B17 synthesis and multidrug efflux/multidrug efflux system
	?	NC_000913_3_hsa_tpiA	2811372 =	42 (0.910)					intergenic (+72/‑55)	mprA/emrA	transcriptional repressor of microcin B17 synthesis and multidrug efflux/multidrug efflux system
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGTGGAGAACAATATGAGCGCAAATGCGGAGACTCAAACCCCGCAGCAACCGGTAAAGAAGAGCGGCAAACGTAAGCGTCTGCTCCTCCTTCTCACCTTGCTCT  >  NC_000913_3_hsa_tpiA/2811229‑2811517                                                                                                                                                |                                                                                                                                                  aTCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGCTTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTg                                                                                                                                              >  2:5872/1‑149 (MQ=255)  tCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTgg                                                                                                                                             <  1:653654/149‑1 (MQ=255)   cACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTGGc                                                                                                                                            >  2:175226/1‑149 (MQ=255)     gccGCAAATCATTCTCCCGGCTGGACCAGAGGGAAGAAGGCGGGGTGGTTCTAGAGGTAATCAGCTAACTAGTCATCTCGCTCAAAAATCCAGATTAAAAAAAAAAAAAATGACTGGCCAGCATCGCTACATGCTGGCCTTTTTGGCaa                                                                                                                                          <  2:767493/148‑1 (MQ=255)      ccGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAACTGACTGGCCAGCATCGCAACATGCTTGCCTTTTTGACacg                                                                                                                                         >  2:14152/1‑147 (MQ=255)      ccGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAg                                                                                                                                         >  2:847009/1‑149 (MQ=255)      ccGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAg                                                                                                                                         <  1:818988/149‑1 (MQ=255)                          tcGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGa                                                                                                                     <  1:415703/149‑1 (MQ=255)                                         aaGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGTg                                                                                                      <  1:292205/149‑1 (MQ=255)                                          aGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGt                                                                                                       <  2:807213/147‑1 (MQ=255)                                          aGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGt                                                                                                       >  1:807213/1‑147 (MQ=255)                                           gACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCGGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGTGga                                                                                                    >  1:840816/1‑149 (MQ=255)                                              ggTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGGCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGTg                                                                                                      <  1:567362/144‑1 (MQ=255)                                              ggTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGTg                                                                                                      >  2:567362/1‑144 (MQ=255)                                                tgtgGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTTAGACGATCGTGGAGAACa                                                                                               >  1:701577/1‑149 (MQ=255)                                                tgtgGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGTGGAGAACa                                                                                               >  2:305483/1‑149 (MQ=255)                                                 gtgGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACGTGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGTGGAGGACaa                                                                                              >  1:672782/1‑149 (MQ=255)                                                    gTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGTGGAGAACAatat                                                                                           <  1:252833/149‑1 (MQ=255)                                                      tctcGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCGGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGTGGAGAACAATATGa                                                                                         <  2:840816/149‑1 (MQ=255)                                                                 tGAGCTACTGAGTTATCTCGCTCGAAGGCCGAGAGTTATAAAAGAAAAAAGGACGGGCCAGGATCGCAACATGCTGGCGTTTGTGGCAAGCAGGTCGGCTCAGCTGATGAGTTAAGAAGATCGTGGAGAACAATATGGGCGCAAATGCg                                                                              <  2:389959/149‑1 (MQ=255)                                                                       aaCGCGTCATCTCGCTCAAAAATTCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGTGGAGAACAATATGAGCGCAAATGCGGAGACt                                                                        <  1:101984/149‑1 (MQ=255)                                                                              cATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGTGGAGAACAATATGAGCGCAAATGCGGAGACTCAAAccc                                                                 <  2:687070/149‑1 (MQ=255)                                                                                  tcGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGTGGAGAACAATATGAGCGCAAATGCGGCGACTCAAACCCCgca                                                             >  2:256846/1‑149 (MQ=255)                                                                                              ccAGATTTATAAAAGAAAAAATGACGGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGTGGAGAACAATATGAGCGCAAATGCGGAGACTCAAACCCCGCAGCAACCGGTaaa                                                 <  1:236453/149‑1 (MQ=255)                                                                                                aGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGGCGATGAGTTAATAAGAGCGTGGAGAACAATATGAGCGCAAATGCGGAGACTCAAACCCAGCAACAACCGGTAaaga                                               >  1:411977/1‑149 (MQ=255)                                                                                                aGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGTGGAGAACAATATGAGCGCAAATGCGGAGACTCAAACCCCGCAGCAACCGGTAaaga                                               <  2:662928/149‑1 (MQ=255)                                                                                                     tataAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGTCTCAGCCGATGAGTTAAGAAGATCGTGGAGAACAATATGAGCGCAAATGCGGAGACTCAAACCCCGCAGCAACCGGTAAAGACGAGc                                          <  2:662758/149‑1 (MQ=255)                                                                                                      ataAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCCCAGCCGATGCGATAGGTATACCTGGGAGAACAATATGAGCGCAAATGCGGAGCCTCAAACCCCGCAGCAACCGGTACAGAAGAGCg                                         >  2:656707/1‑149 (MQ=255)                                                                                                       taAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGTGGAGAACAATATGAGCGCAAATGCGGAGACTCAAACCCCGCAGCAACCGGTAAAGAAGAGCgg                                        <  2:447174/149‑1 (MQ=255)                                                                                                        aaaaGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGTGGAGAACAATATGAGCGCAAATGCGGAGACTCAAACCCCGCAGCAACCGGTAAAGAAGAGCGGc                                       >  1:107803/1‑149 (MQ=255)                                                                                                        aaaaGAAAAAATGACTGGCCAGCATAGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTTAGAAGATCGTGGCGAACAATATGAGCGCAAATGCGGAGACTCAAACCCCGCAACAACCGGTAAAGAAGAGCGGc                                       >  1:434432/1‑149 (MQ=255)                                                                                                                     aCTGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGTCGATGAGTTAAGAAGATCGTGGAGAACAATATGAGCGCAAATGCGGAGACTCAAACCCCGCAGCAACCGGTGAAGAAGAGCGGCAAACGTAAGCGTc                          <  2:58102/149‑1 (MQ=255)                                                                                                                         gCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGTGGAGAACAATATGAGCGCAAATGCGGAGACTCAAACCCCGCAGCAACCGGTAAAGCAGAGCGGCAAACGTAAGCGTCTGct                      >  1:546313/1‑149 (MQ=255)                                                                                                                         gCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGTGGAGAACAATATGAGCGCAAATGCGGAGACTCAAACCCCGCAGCAACCGGTAAAGAAGAACGGCAAACGTAAGCGTCTGct                      >  2:189513/1‑149 (MQ=255)                                                                                                                          ccAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGTGGAGAACAATATGAGCGCAAATGCGGAGACTCAAACCCCGCAGCAACCGGTAAAGAAGAGCGGCAAACGTAAGCGTCTGctc                     >  2:271672/1‑149 (MQ=255)                                                                                                                           cAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGTGGAGAACAATATGAGCGCAAATGCGga                                                                            <  2:507208/93‑1 (MQ=255)                                                                                                                           cAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGTGGAGAACAATATGAGCGCAAATGCGga                                                                            >  1:507208/1‑93 (MQ=255)                                                                                                                             gCATCGCAACATGCTGGTCTTGTTTGCAAGCAGGTCGGCTCAGCTCATGATGTAAGAAGATCGTGGAGAACAATATGAGCGCAAATGCGGAGACTCAAACCCCGCAGCAACCGGTAAAGAAGAGCGGCAAACGTAAGCGTCTGctcctc                  <  2:631493/149‑1 (MQ=255)                                                                                                                             gCATCGCAACATGCGGGCCTTGTTGGCAAGCAGGGCGGCTCAGCCGATGAGTTAAGAAGATCGTGGAGAACAATATGAGCGCAAATGCGGAGACTCAAACCCCGCAGCAACCGGTAAAGAAGAGCGGCAAACGTAAGCGTCTGctcctc                  <  2:508835/149‑1 (MQ=255)                                                                                                                                  gCAACATGCTGGCCTTTTTGGCAAGCACGTCGGCTCAGCTGACGAGTTAAGAAGATCATGGAGAACAATATGAGCGCAAATGCGGAGACTCAAACCCCGCAACAACCGGTAAAGAAGAGCGGCAAACGTAAGCCTCTGCTCCTCCTtcc             >  2:7470/1‑148 (MQ=255)                                                                                                                                   cAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGTGGAGAACAATATGAGCGCAAATGCGGAGACTCAAACCCCGCAGCAACCGGTAAAGAAGAGCGGCAAACGTAAGCGTCTGCTCCTCCTtctc            >  1:178215/1‑149 (MQ=255)                                                                                                                                   cAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGTGGAGAACAATATGAGCGCAAATGCGGAGACTCAAACCCCGCAGCAACCGGTAAAGAAGAGCGGCAAACGTAAGCGTCTGCTCCTCCTtctc            >  1:619696/1‑149 (MQ=255)                                                                                                                                             gCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTGAGAAGATCGTGGAGGACAATATGAGCGCAAATGCGGAGACTCAAACCCCGCAGCAACCGGTAAAGAAGAGCGGCAAACGTAAGCGTCTGCTCCTCCTTCTCACCTTGctct  >  1:234761/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                                  ATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAACGCGTCATCTCGCTCAAAAATCCAGATTTATAAAAGAAAAAATGACTGGCCAGCATCGCAACATGCTGGCCTTTTTGGCAAGCAGGTCGGCTCAGCCGATGAGTTAAGAAGATCGTGGAGAACAATATGAGCGCAAATGCGGAGACTCAAACCCCGCAGCAACCGGTAAAGAAGAGCGGCAAACGTAAGCGTCTGCTCCTCCTTCTCACCTTGCTCT  >  NC_000913_3_hsa_tpiA/2811229‑2811517

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.