| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_tpiA | 4045637 = | 74 (1.710) | 7 (0.170) | 5/272 | 5.6 | 9.1% | intergenic (+8/+33) | yihF/yihG | DUF945 family protein/inner membrane protein, inner membrane acyltransferase |
| ? | NC_000913_3_hsa_tpiA | 4045665 = | 71 (1.770) | intergenic (+36/+5) | yihF/yihG | DUF945 family protein/inner membrane protein, inner membrane acyltransferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTTACATGGCGACTACATCAATGACAAAAGCTTTAAGCGCCATTTTCAGCAATGGCTGAACTCATTGTGGCAGGAAAAAGACCGGCTTCTGACGTCTCTCATGTCATCACAGCGTCAGAATAAGTAAGTTTTACTCGCCTCTGAATGAGCAGAGGCGAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913_3_hsa_tpiA/4045796‑4045637‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagaggcgagtAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCATTGCTGAAAATGGCGCTTAAAGCTTTTGTCATTGATGTAGTCGCCATGTAACTCATCGGCAATAGGCTG > NC_000913_3_hsa_tpiA/4045665‑4045813 GTTACATGGCGACTACATCAATGACAAAAGCTTTAAGCGCCATTTTCAGCAATGGCTGAACTCATTGTGGCAGGAAAAAGACCGGCTTCTGACGTCTCTCATGTCATCACAGCGTCAGAATAAGTAAGTTTTACTCGCCTCTGAATGAGC > 1:162927/1‑150 TACATGGCGACTACATCAATGACAAAAGCTTTAAGCGCCATTTTCAGCAATGGCTGAACTCATTGTGGAAGGAAAAAGACCGGCTTCTGACGTCTCTCATGTCATCACAGCGTCAGAATAAGTAAGTTTTACTCGCCTCTGAATGAGCAG < 2:277046/150‑1 ACATGGCGACTACATCAATGACAAAAGCTTTAAGCGCCATTTTCAGCAATGGCTGAACTCATTGTGGCAGGAAAAAGACCGGCTTCTGACGTCTCTCATGTCATCACAGCGTCAGAATAAGTAAGTTTTACTCGCCTCTGAATGAGCAGA > 3:235735/1‑150 ACATGGCGACTACATCAATGACAAAAGCTTTAAGCGCCATTTTCAGCAATGGCTGAACTCATTGTGGCAGGAAAAAGACCGGCTTCTGACGTCTCTCATGTCATCACAGCGTCAGAATAAGTAAGTTTTACTCGCCTCTGAATGAGCAGA > 3:30324/1‑150 GGCGACTACATCAATGACAAAAGCTTTAAGCGCCATTTTCAGCAATGGCTGAACTCATTGTGGCAGGAAAAAGACCGGCTTCTGACGTCTCTCATGTCATCACAGCGTCAGAATAAGTAAGTTTTACTCGCCTCTGAATGAGCAGAGGCG > 2:424670/1‑150 CGACTACATCAATGACAAAAGCTTTAAGCGCCATTTTCAGCAATGGCTGAACTCATTGTGGCAGGAAAAAGACCGACTTCTGACGTCTCTCATGTCATCACAGCGTCAGAATAAGTAAGTTTTACTCGCCTCTGAATGAGCAGAGGCGAG < 2:255355/150‑1 GACTACATCAATGACATAAGCGTTAAGCGCCCTTTTCTGCAATGGCTGAACTCATTGTGGCAGGAAAAAGACCGGCTTCTGACGTCTCTCCTGTCATCACAGAGTCAGAATAAGTAAGTTTTACTCGCCTCTGAATGAGCAGAGGCGAGT < 4:40495/150‑1 GACTACATCAATGACAAAAGCTTTAAGCGCCATTTTCAGCAATGGCTGAACTCATTGTGGCAGGAAAAAGACCGGCTTCTGACGTCTCTCATGTCATCACAGCGTCAGAATAAGTAAGTTTTACTCGCCTCTGAATGAGCAGAGGCGAGT < 4:89571/150‑1 GCTTCTGACGTCTCTCATGTCATCACAGCGGCAGAATAAGTAAGTTTTACTCGCCTCTGAATGAGCAGAGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGCCAGGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCAGCATGAGTT > 2:99963/1‑150 ACGTCTCTCATGTCATCACAGCGTCAGAATAAGTAACTTCGTCGGTCGGCTGAGTGAGCAGCGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATTGGTTCAGCCAT > 2:338673/1‑150 GTCAGAATAAGTAAGTTTTACTCGCCTCTGAATGAGCAGAGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTAAGAAGCAGGTCTTTATCCTGGCACACTGAGTACAGCCATTGCTGAAGATGGCGCTTAAAGC > 1:82078/1‑150 AATAAGTAAGTTTTACTCGCCTCTGAATGAGCAGAGGCGAGTGAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCATTGCTGAAAATGGCGCTTAAAGCTTTTG > 4:30911/1‑150 TCGCCTCTGAATGAGCAGAGGCGAGTACAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCATTGCTGAAAATGGCGCTTAAAGCTTTTGTCATTGATGTAGTCGC > 1:305281/1‑150 TCGCCTCTGAATGAGCAGAGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCATTGCTGAAAATGGCGCTTAAAGCTTTTGTCATTGATGTAGTCGC > 3:2556/1‑150 TCGCCTCTGAATGAGCAGAGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCATTGCTGAAAATGGCGCTTAAAGCTTTTGTCATTGATGTAGTCGC > 3:246643/1‑150 CAGAGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCATTGCTGAAAATGGCGCTTAAAGCTTTTGTCATTGATGTAGTCGCCATGTAACTCATCGG < 2:198913/150‑1 AGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCATTGCTGAAAATGGCGCTTAAAGCTTTTGTCATTGATGTAGTCGCCATGTAACTCATCGGCAA > 3:122836/1‑150 AGGCGAGTAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCATTGCTGAAAATGGCGCTTAAAGCTTTTGTCATTGATGTAGTCGCCATGTAACTCATCGGCAA > 3:111258/1‑150 GTAAAACTTACTTATTCTGACGCTGTGCTGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCATTGCTGAAAATGGCGCTTAAAGCTTTTGTCATTGATGTAGTCGCCCTGTAACTCATGGGCAATAGGCT < 4:234066/150‑1 TAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCATTGCTGAAAATGGCGCTTAAAGCTTTTGTCATTGATGTAGTCGCCATGTAACTCATCGGCAATAGGCTG > 4:126643/1‑150 GTTACATGGCGACTACATCAATGACAAAAGCTTTAAGCGCCATTTTCAGCAATGGCTGAACTCATTGTGGCAGGAAAAAGACCGGCTTCTGACGTCTCTCATGTCATCACAGCGTCAGAATAAGTAAGTTTTACTCGCCTCTGAATGAGCAGAGGCGAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913_3_hsa_tpiA/4045796‑4045637‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagaggcgagtAAAACTTACTTATTCTGACGCTGTGATGACATGAGAGACGTCAGAAGCCGGTCTTTTTCCTGCCACAATGAGTTCAGCCATTGCTGAAAATGGCGCTTAAAGCTTTTGTCATTGATGTAGTCGCCATGTAACTCATCGGCAATAGGCTG > NC_000913_3_hsa_tpiA/4045665‑4045813 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |