New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	4347349 =	28 (0.810)	4 (0.120)	4/266	4.3	12.7%	intergenic (‑41/+37)	fumB/dcuB	anaerobic class I fumarate hydratase (fumarase B)/C4‑dicarboxylate transporter, anaerobic; DcuS co‑sensor
	?	NC_000913_3_hsa_tpiA	4347377 =	29 (0.900)					intergenic (‑69/+9)	fumB/dcuB	anaerobic class I fumarate hydratase (fumarase B)/C4‑dicarboxylate transporter, anaerobic; DcuS co‑sensor
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GATAGTATTCGGTATTGTCTTTCCCCATCGGGAAAGGTGCCTGGTAGATAAAGGGTTTGTTTGACATAGCTTCCAGCCTGTAACTCTGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGACGCACGATACGCTCACACCAATCAACCCCGGCAGAATAAAGCTGTGGTTGATGACGAAGCGACCGATGTGGGTGGTGCCGGAACGGTCAAACTGA  >  NC_000913_3_hsa_tpiA/4347242‑4347521                                                                                                                                        |                                                                                                                                                 gATAGTATTCGGTATTGTCTTTCCCCATCGGGAAAGGTGCCTGGTAGATAAAGGGTTTGTTTGACATAGCTTCCAGCCTGTAACTCTGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCCCGGGCGGCACGCAAAGGGCATTtata                                                                                                                                     >  1:405526/1‑149 (MQ=255)   tAGTATTCGGTATTGTCTTTCCCCATCGGGAAAGGTGCCTGGTAGATAAAGGGTTTGTTTGACATAGCTTCCAGCCTGTAACTCTGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATGTATAAg                                                                                                                                   >  1:225783/1‑149 (MQ=255)      tATTCGGTATTGTCTTTCCCCATCGGGAAAGGTGCCTGGTAGATAAAGGGTTTGTTTGACATAGCTTCCAGCCTGTAACTCTGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAAc                                                                                                                                <  1:171440/149‑1 (MQ=255)           ggTATTGTCTTTCCCCATCGGGAAAGGTGCCTGGTAGATAAAGGGTTTGTTTGACATAGCTTCCAGCCTGTAACTCTGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTa                                                                                                                           >  2:275166/1‑149 (MQ=255)                    tttCCCCATCGGGAAAGGTGCCTGGTAGATAAAGGGTTTGTTTGACATAGCTTCCAGCCTGTAACTCTGTATTTGTTATTCGAAAATGGCGTGGCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCgcggc                                                                                                                  <  1:390784/149‑1 (MQ=255)                         ccATCGGGAAAGGTGCCTGGTAGATAAAGGGTTTGTTTGACATAGCTTCCAGCCTGTAACGCTGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGAGCATTTATAACAACCCGTACACCGCGGCGAAGa                                                                                                             >  2:235127/1‑149 (MQ=255)                          cATCGGGAAAGGTGCCTGGTAGATAAAGGGTTTGTTTGACATAGCTTCCAGCCTGTAACTCTGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGAt                                                                                                            >  2:110574/1‑149 (MQ=255)                                 aaaGGTGCCTGGTAGATAAAGGGTTTGTTTGACATAGCTTCCAGCCTGTAACTCTGTATTTGTTATTCGAAAATGGGGGGCGGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAGCCg                                                                                                     <  2:582452/149‑1 (MQ=255)                                                aTAAAGGGTTTGTTTGACATAGCTTCCAGACTGTAACTCTGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCCGCCACGATGGAGACGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGACGAACGATACg                                                                                      >  1:140384/1‑149 (MQ=255)                                                 tAAAGGGTTTGTTTGACATAGCTTCCAGCCTGTAACTCGGTATTTTTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGACCCCGTACATCGCGGCGAAGATCCAGCCGAAGACGCACGATACGc                                                                                     <  1:104820/149‑1 (MQ=255)                                                  aaaGGGTTTGTTTGACATAGCTTCCAGCCTGTAACTCTGTATTAGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGACGCACGATACGCt                                                                                    <  2:534219/149‑1 (MQ=255)                                                    aGGGTTTGTTTGCCATTGTTTCCAGCCTGTAACTCTGTATTTGTTATTCGAAAATGGCGTGCTGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGACGCACGATACGCTca                                                                                  <  2:22754/149‑1 (MQ=255)                                                                   tAGCTTCCAGCCTGTAACTCTGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGACGCACGATACGCTCACACCAATCAACCCCg                                                                   >  2:380317/1‑149 (MQ=255)                                                                                  aaCTCTGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGACGCACGATACGCTCACACCAATCAACCCCGGCAGAATAAAGCtgt                                                    <  2:549708/149‑1 (MQ=255)                                                                                    ctctGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAg                                                                                                        <  2:262134/95‑1 (MQ=255)                                                                                    ctctGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAg                                                                                                        >  1:262134/1‑95 (MQ=255)                                                                                         tagttGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGACGCACGATACGCTCACACCAATCAACCCCGGCAGAATAAAGCTGTGGTtgat                                             <  2:542373/146‑1 (MQ=255)                                                                                           tttGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGACGCACGATACGCTCACACCAATCAACCCCGGCAGAATAAAGCTGTGGTtgatga                                           <  2:201416/149‑1 (MQ=255)                                                                                               ttATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGACGCACGATACGCTCACACCAATCAACCCCGGCAGAATAAAGCTGTGGTTGATGACGaa                                       <  1:275166/149‑1 (MQ=255)                                                                                                 aTTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGACGCACGATACGCTCACACCAATCAACCCCGGCAGAATAGAGCGGGGGTTGGTGACGAAGc                                     >  1:135084/1‑149 (MQ=255)                                                                                                      aaaaTGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGACGCACGATACGCTCACACCAATCAACCCCGGCAGAATAAAGCTGTGGTTGATGACGAAGCGACCg                                >  1:142740/1‑149 (MQ=255)                                                                                                             cGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGACGCACGATACGCTCACACCAATCAACCCCGGCAGAAGAAAGCAGTGGTTGATGACGAAGCGCCCGAGgtggg                         >  2:465185/1‑149 (MQ=255)                                                                                                                  cgcgTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGACGCACGATACGCTCACACCAATCAACCCCGGCAGAATAAAGCTGTGGTTGATGACGAAGCGACCGATGTGGgtggtg                    >  1:211514/1‑149 (MQ=255)                                                                                                                         tCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTa                                                                                                                           <  1:541179/39‑1 (MQ=255)                                                                                                                         tCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTa                                                                                                                           >  2:541179/1‑39 (MQ=255)                                                                                                                         tCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACGTCGCGGCGAAGATCCAGCGGAAGACGCACGATACGCTCACACAAATCAACCCCGGCAGAATAAAGGTGTGGTTGATGACGAAGCGCACGATGTGGGTGGTGACGGaag             >  2:260996/1‑148 (MQ=255)                                                                                                                         tCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGCCGCACGGTACGCTCACACCAATCAACCCCGGCAGCATAAAGCTGTGGTTGATGACGAAGCGACCGATGTGGGTGGGGCCGGAAc             >  1:237026/1‑149 (MQ=255)                                                                                                                             gggCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGACGCACGATACGCTCACACCAATCAACCCCGGCAGAATAAAGCTGTGGTTGATGACGAAGCGACCGATGTGGGTGGTGCCGGAACGGTc         <  1:178493/149‑1 (MQ=255)                                                                                                                             gggCGGCACGCAAAGTGCATATATAAGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGACACACGATACGCTCACACCAATCAACCCCGGCAGAATAAAGCAGTGGTTGATGACGAAGCGACCAATGTGGGTGGTGCCGGAAAGGTc         >  2:12618/1‑149 (MQ=255)                                                                                                                                cggcACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGGTCCAGCCGAAGACGCACGATACGCTCACACCAATCAACCCCGGCAGAATAAAGCTGTGGTTGATGACGAAGCGACCGATGTGGGTGGTGCCGGAACGGTCaaa      <  2:431605/149‑1 (MQ=255)                                                                                                                                    aCGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGACGCACGATACGCTCACACCAATCAACCCCGGCAGAATAAAGCTGTGGTTGATGACGAAGCGACCGATGTGGGTGGTGCCGGAACGGTCAAACTGa  >  2:380583/1‑149 (MQ=255)                                                                                                                                        |                                                                                                                                                 GATAGTATTCGGTATTGTCTTTCCCCATCGGGAAAGGTGCCTGGTAGATAAAGGGTTTGTTTGACATAGCTTCCAGCCTGTAACTCTGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGACGCACGATACGCTCACACCAATCAACCCCGGCAGAATAAAGCTGTGGTTGATGACGAAGCGACCGATGTGGGTGGTGCCGGAACGGTCAAACTGA  >  NC_000913_3_hsa_tpiA/4347242‑4347521

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.