New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	= 624658	48 (1.110)	7 (0.170)	7/276	4.4	12.1%	intergenic (‑148/‑227)	fepB/entC	ferrienterobactin ABC transporter periplasmic binding protein/isochorismate synthase 1
	?	NC_000913_3_hsa_tpiA	= 624671	55 (1.310)					intergenic (‑161/‑214)	fepB/entC	ferrienterobactin ABC transporter periplasmic binding protein/isochorismate synthase 1
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTTCATTGTAACCACAACCAGATGCAACCCCGAGTTGCAGATTGCGTTACCTCAAGAGTTGACATAGTG  >  NC_000913_3_hsa_tpiA/624521‑624805                                                                                                                                          |                                                                                                                                                    ccTGTTATTACTAGGGTTAAGTGCGTAAGCACAAATTCAACAAAGCGCACAATCCGTCCCCCCGCCCCTTTGGGGAGAGGGTTAGTGTGAGGGCAACAGCCAGCACTGGGGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAggg                                                                                                                                          <  2:454637/149‑1 (MQ=25)  cTGTAATAAATAAGGTTAAGGGCGTAACGACAAATCCGACAAAGCCCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAggg                                                                                                                                         <  1:568020/149‑1 (MQ=37)   tGTTATTAATAAGGTTAAGGGCGTACTCAACAGCGAAGGTAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTACCCCTGGAAGGga                                                                                                                                        >  2:539336/1‑149 (MQ=18)     ttattaATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGgaga                                                                                                                                      >  1:489649/1‑149 (MQ=255)         taataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGGGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCAAGCCCTAACCATGGAAGGGAGAgggg                                                                                                                                  >  1:381433/1‑149 (MQ=255)              aGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGa                                                                                                                             >  1:278659/1‑149 (MQ=255)                gTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAAc                                                                                                                           >  1:452261/1‑149 (MQ=255)                gTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAAc                                                                                                                           >  1:74046/1‑149 (MQ=255)                       gCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGGGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAg                                                                                                                    <  1:354569/149‑1 (MQ=255)                                  aaTTGGAAAAAGCGCACAATCCGTCGCCGCCCCCATTGGGGGGGGGGGTTGGGGGGAGGGGAACAGCCAGCACTGGTGCGAACATTATCCCTCCCCCCGGCCCTCAGCCTGGGAACGAGAGGGGTCATAACTTCGCAGGACATCACAtt                                                                                                         <  2:149225/149‑1 (MQ=255)                                     gcGACAAAGCCCACAAGCCGCCCCCTCGCCCCGTGTGGGAGAGTGTGAGGGGGGCGGCACCAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTgcg                                                                                                      <  2:298462/148‑1 (MQ=255)                                          aaaGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGGGAACATTAACCCTCGCCCCAGCCCTCATCCGGGAAGGGAGAGGGGGCAGAACGGCGCAGGCCTTCAAATTGCGCTTAt                                                                                                 >  1:518644/1‑149 (MQ=25)                                          aaaGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCCTACCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTAt                                                                                                 >  1:363016/1‑149 (MQ=255)                                          aaaGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTAt                                                                                                 >  1:237191/1‑149 (MQ=255)                                            aGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGc                                                                                               >  2:574391/1‑149 (MQ=255)                                                   aaTCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACGTCACATTGCGCTTATGCGAATCCa                                                                                        >  1:546376/1‑149 (MQ=255)                                                    aTCCGTCCCTCCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCAt                                                                                       <  2:713483/149‑1 (MQ=255)                                                    aTCCGCCTCCTCGCCCCTTTGGGGAGGGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCAt                                                                                       <  1:728328/149‑1 (MQ=255)                                                     tgggTCCCCTCGCCCTGTGGGGGAGATGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATc                                                                                      <  2:335031/146‑1 (MQ=255)                                                     tcggTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCGGGACATCACATTGCGCTTATGCGTATCCATc                                                                                      >  2:320164/4‑149 (MQ=255)                                                     tCCGCCCCCCCGCCCCTTGGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATc                                                                                      <  2:489649/149‑1 (MQ=255)                                                         tCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCaata                                                                                  >  2:220068/1‑149 (MQ=255)                                                           cccTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCaataat                                                                                <  1:536830/149‑1 (MQ=255)                                                                        ggggAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTTc                                                                   >  2:59173/1‑149 (MQ=255)                                                                          ggcgagGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTTCAt                                                                 <  2:41612/146‑1 (MQ=255)                                                                          ggAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTTCAt                                                                 <  1:679671/149‑1 (MQ=255)                                                                           gagaGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGAc                                                                                                                 >  2:515900/1‑100 (MQ=255)                                                                           gagaGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGAc                                                                                                                 <  1:515900/100‑1 (MQ=255)                                                                                      ggcggggggAACAGCCAGCACTGGTGCGAACATTAACCCTCACTCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTTCATTGTAACCACAAc                                                     <  2:662209/144‑1 (MQ=255)                                                                                               acccgccagcACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTTCATTGTAACCACAACCAGATGCaa                                            <  1:679504/145‑1 (MQ=255)                                                                                                aCAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTTCATTGTAACCACAACCAGATGCAAc                                           <  1:530383/149‑1 (MQ=255)                                                                                                    ccagcACTGGTGCGAACATTAACCCTCACCCCAGCGCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTTCATTGTAACCACAACCAGATGCAACCCCg                                       >  2:656414/1‑149 (MQ=255)                                                                                                    ccagcACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGGAGGGAGAGGGGGCAGAACGGCGCAGAACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTTCATTTTAACCACAACCACATTAAACCCCg                                       >  2:434625/1‑149 (MQ=255)                                                                                                    ccagcACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTTCATTGTAACCACAACCAGATGCAACCCCg                                       >  2:699825/1‑149 (MQ=255)                                                                                                              tGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTTCATTGTAACCACAACCAGATGCAACCCCGAGTTGCAGAt                             >  2:464855/1‑149 (MQ=255)                                                                                                                  aaCATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTTCATTGTAACCACAACCAGATGCAACCCCGCGTTGCAGATTGCg                         >  2:400331/1‑149 (MQ=255)                                                                                                                      ttAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTTCATTGTAACCACAACCAGATGCAACCCCGAGTTGCAGATTGCGTTAc                     <  1:220068/149‑1 (MQ=255)                                                                                                                          cccTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCAtttt                                                                    <  2:593314/98‑1 (MQ=255)                                                                                                                          cccTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCAtttt                                                                    >  1:593314/1‑98 (MQ=255)                                                                                                                           ccTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTTCATTGTAACCACAACCAGATGCAACCCCGAGTTGCAGATTGCGTTACCTCaa                >  2:280574/1‑149 (MQ=255)                                                                                                                           ccTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTTCATTGTAACCACAACCAGATGCAACCCCGAGTTGCAGATTGCGTTACCTCaa                >  1:611850/1‑149 (MQ=255)                                                                                                                             tCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTTCATTGTAACCACAACCAGATGCAACCCCGAGTTGCAGATTGCGTTACCTCAaga              >  2:106000/1‑149 (MQ=255)                                                                                                                             tCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTTCATTGTAACCACAACCAGATGCAACCCCGAGTTGCAGATTGCGTTACCTCAaga              <  1:656414/149‑1 (MQ=255)                                                                                                                              cACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTTCATTGTAACCACAACCAGATGCAACCCCGAGTTGCAGATTGCGTTACCTCAagag             <  2:452261/149‑1 (MQ=255)                                                                                                                              cACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTTCATTGTAACCACAACCAGATGCAACCCCGAGTTGCAGATTGCGTTACCTCAagag             <  2:74046/149‑1 (MQ=255)                                                                                                                                tcccAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTTCATTGTAACCACAACCAGATGCAACCCCGAGTTGCAGATTGCGTTACCTCAAGAGtt           <  2:363016/148‑1 (MQ=255)                                                                                                                                     gCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTTCATTGTAACCACAACCAGATGCAACCCCGAGCTGCAGATTGCGTTACCTCAAGAGTTGACAt      <  1:559220/149‑1 (MQ=255)                                                                                                                                         tCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTTCATTGTAACCACAACCAGATGCAACCCCGAGTTGCAGATTGCGTTACCTCAAGAGTTGACATAGTg  >  1:166863/1‑149 (MQ=255)                                                                                                                                          |                                                                                                                                                    CCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTTCATTGTAACCACAACCAGATGCAACCCCGAGTTGCAGATTGCGTTACCTCAAGAGTTGACATAGTG  >  NC_000913_3_hsa_tpiA/624521‑624805

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.