| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_tpiA | 915197 = | 58 (1.070) | 5 (0.100) | 5/254 | 6.7 | 8.8% | intergenic (‑340/+155) | ybjE/aqpZ | putative transporter/aquaporin Z |
| ? | NC_000913_3_hsa_tpiA | = 2229174 | 51 (1.030) | intergenic (+109/+264) | yohP/dusC | uncharacterized protein/tRNA‑dihydrouridine synthase C | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATTAATTAACGCAGAAGGCCTGGCGTAATGTCAGGCCTTTTTTTAAGATGTTGTTATATGTTGATTCATCATCTTGTTGCGCTCCTTTCATGAGCTAAGCAACATATTGCCACTGGCGCAAGGAGCGCGCAGGGGGCGGCCAATCGCCGCCGCCCCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913_3_hsa_tpiA/915356‑915197‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccccctgcGCGCTCCTTGCGCCAGTGATTATATGAAGCAATGCACATGACAGGAGCGCAACAGGATGAGAGACTGAAATATTCTCGTTATTTTCGGACCTGATGACATTAATTAATTTTAAAATATCATCTTAAATACGCCAGTCACCACCAGT < NC_000913_3_hsa_tpiA/2229174‑2229029 ATTAATTAACGCAGAAGGCCTGGCGTAATGTCAGGCCTTTTTTTAAGATGTTGTTATATGTTGATTCATCATCTTGTTGCGCTCCTTTCATGACCTAAGCAACATATTTCCACTGACCCAACGATCGCGCAGGGGGCGGCCGATCGCCG > 2:400709/1‑149 acCGCAGCAGGCCTGGCGTAATGTCAGGCCTTTTTTTAAGATGTTGTGATATGTTGATTCATCATCTTGTTGCGCTCCTTTCATGAGCTAAGCAACATATTGCCACTGGCGCAAGGAGCGCGCAGGGGGCGGCCAATCGCCGCCGCCCC < 1:17431/147‑1 CGCAGAAGGCCTGGCGTAATGTCAGGCCTTTTTTTAAGATGTTGTTATATGTTGATTCATCATCTTGTTGCGCTCCTTTCATGAGCTAAGCAACATATTGCCACTGGCGCAAGGAGCGCGCAGGGGGCGGCCAATCGCCGCCGCCCCCT < 1:534291/149‑1 GCAGAAGGCCTGGCGTAATGTCAGGCCTTTTTTTAAGATGTTGTTATATGTTGATTCATCATCTTGTTGCGCTCCTTTCATGAGCTAAGCAACATATTGCCACTGGCGCAAGGAGCGCGCAGGGGGCGGCCAATCGCCGCCGCCCCCTG < 1:713628/149‑1 GCAGAAGGCCTGGCGGAATGTAAGGCCTTTTTTTAAGATGCTGTTATATGTTGATTCATCATCTTGTTGCGCTCCTTCCCTGCGTGAAGCAACATATTGCCACTGGCGCAAGGAGCGCGCAGGGGGCGGCCAATCGCCGCCGCCCCCTG < 1:228895/149‑1 GCAGGGGGCGGCCAATCGCCGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGATTATATGAAGCAATGCA < 1:744599/68‑1 GCAGGGGGCGGCCAATCGCCGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGATTATATGAAGCAATGCA > 2:744599/1‑68 AGGGGGCGGCCAATCGCCGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGATTATATGAAGCAATGCACATGACAGGAGCGCAACAGGATGAGAGACTGAAATATTCTCGTTATTTTCGGACCTGATGACATTAATTAATTTTCAAATATC > 2:112813/1‑149 GGGGCGGCCAATCGCCGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGATTATATGAAGCAATG < 1:877883/62‑1 GGGGCGGCCAATCGCCGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGATTATATGAAGCAATG > 2:877883/1‑62 CGCCCCCTGCGCGCTCCTTGCGCCAGTGATTATATGAAGCAATGCACATGACAGGAGCGCAACAGGATGAGAGACTGAAATATTCTCGTTATTTTCGGACCTGATGACATTAATTAATTTTAAAATATCATCTTAAATACGCCAGTCAC < 2:608018/149‑1 CCTGCGCGCTCCTTGCGCCAGTGATTATATGAAGCAATGCACATGACAGGAGCGCAACAGGATGAGAGACTGAAATATTCTCGTTATTTTCGGACCTGATGACATTAATTAATTTTAAAATATCATCTTAAATACGCCAGTCACCACCA < 1:185924/149‑1 TGCGCGCTCCTTGCGCCAGTGATTATATGAAGCAATGCACATGACAGGAGCGCAACAGGATGAGAGACTGAAATATTCTCGTTATTTTCGGACCTGATGACATTAATTAATTTTAAAATATCATCTTAAATACGCCAGTCACCACCAGT > 2:659016/1‑149 ATTAATTAACGCAGAAGGCCTGGCGTAATGTCAGGCCTTTTTTTAAGATGTTGTTATATGTTGATTCATCATCTTGTTGCGCTCCTTTCATGAGCTAAGCAACATATTGCCACTGGCGCAAGGAGCGCGCAGGGGGCGGCCAATCGCCGCCGCCCCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913_3_hsa_tpiA/915356‑915197‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccccctgcGCGCTCCTTGCGCCAGTGATTATATGAAGCAATGCACATGACAGGAGCGCAACAGGATGAGAGACTGAAATATTCTCGTTATTTTCGGACCTGATGACATTAATTAATTTTAAAATATCATCTTAAATACGCCAGTCACCACCAGT < NC_000913_3_hsa_tpiA/2229174‑2229029 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |