Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913_3_hsa_tpiA 4,187,628 G→C G766A (GGT→GCT)  rpoC → RNA polymerase, beta prime subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913_3_hsa_tpiA4,187,6280GC98.8% 269.0 / ‑5.9 81G766A (GGT→GCT) rpoCRNA polymerase, beta prime subunit
Reads supporting (aligned to +/- strand):  ref base G (1/0);  major base C (40/39);  minor base T (1/0);  total (42/39)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01

CTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGA  >  NC_000913_3_hsa_tpiA/4187485‑4187769
                                                                                                                                               |                                                                                                                                              
cTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGa                                                                                                                                           >  2:909355/1‑149 (MQ=255)
 ttCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGaa                                                                                                                                          <  1:865846/149‑1 (MQ=255)
 ttCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGaa                                                                                                                                          >  2:865846/1‑149 (MQ=255)
           tCTACATGGTGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAg                                                                                                                               <  2:433614/149‑1 (MQ=255)
              aCATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATTGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTAc                                                                                                                            <  1:563244/149‑1 (MQ=255)
                    tgGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCAtc                                                                                                                      <  2:925010/149‑1 (MQ=255)
                      gCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGTCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGGAGCTCTGAACGTACTCCGGTAATTGAtctc                                                                                                                    >  1:88937/1‑149 (MQ=255)
                        cGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTcca                                                                                                                  >  2:665203/1‑149 (MQ=255)
                         gACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTccac                                                                                                                 >  1:820798/1‑149 (MQ=255)
                         gACTCCGGTGCGCGTGGTTCTGCGCCACAGATTCGTCCGCTTGCTGGTATGCCTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGTCAATCACCGCGAACTTCCGTGAAGCTCTGAATGTACCCCAGTACTTCCTCTccac                                                                                                                 <  1:887767/149‑1 (MQ=255)
                                   cgcgTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGCCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCCCGACCTTCCGTGACGCTCTGAACGTACTCCACTACTTCATCTCCCCCCACGGtcgc                                                                                                       >  2:25643/1‑146 (MQ=255)
                                    gcgTGGTTCTGCGGCACGGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCCCGGTGCTc                                                                                                      >  1:197386/1‑149 (MQ=255)
                                      gTGGTTCTGCGGCACCGATACGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGt                                                                                                    <  1:385884/149‑1 (MQ=255)
                                      gTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGt                                                                                                    >  1:458980/1‑149 (MQ=255)
                                      gTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAACCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAAATCACAGGTATGTCGTACGTAACCCAAGTACGGCATCTCCACCCACGGTGCTCGt                                                                                                    >  1:221769/1‑149 (MQ=255)
                                        ggTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCGGTACTTCATCTCCACCCACGGTGCTCGTaa                                                                                                  >  2:338908/1‑149 (MQ=255)
                                            cTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCATGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAgct                                                                                              >  2:353620/1‑147 (MQ=255)
                                                  cacaGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTcc                                                                                                                                 <  2:422847/108‑1 (MQ=255)
                                                  cacaGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTcc                                                                                                                                 >  1:422847/1‑108 (MQ=255)
                                                     aGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCCTCTACAGGTAAGGTCCCCGGAAATCTCTGGCGGAt                                                                                     >  1:263299/1‑149 (MQ=255)
                                                       aTTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTAAGTCATCTGCCTTACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATAc                                                                                   >  1:708283/1‑149 (MQ=255)
                                                        ttCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATAcc                                                                                  <  1:926144/149‑1 (MQ=255)
                                                         tCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCg                                                                                 <  1:93889/149‑1 (MQ=255)
                                                                 ttGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGaaa                                                                         >  2:348789/1‑149 (MQ=255)
                                                                  tGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGaaaa                                                                        <  1:348789/149‑1 (MQ=255)
                                                                   gCTGGTATGCGTGGTCGGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCCCCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTACAGGTCTGGCGGATACCGCACTGAAAAc                                                                       <  1:910794/149‑1 (MQ=255)
                                                                    cTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACt                                                                      <  2:446402/149‑1 (MQ=255)
                                                                          tGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCa                                                                                                                        >  1:490113/1‑93 (MQ=255)
                                                                          tGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCa                                                                                                                        <  2:490113/93‑1 (MQ=255)
                                                                          tGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAAc                                                                >  2:158065/1‑149 (MQ=255)
                                                                          tGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCCAACTTGCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACCGAAAACTGCGAAc                                                                >  2:160639/1‑149 (MQ=255)
                                                                            cGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTc                                                              <  1:681784/149‑1 (MQ=255)
                                                                               ggTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCgg                                                           <  2:192755/149‑1 (MQ=255)
                                                                                gTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGt                                                          >  2:839013/1‑149 (MQ=255)
                                                                                gTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGt                                                          >  1:873250/1‑149 (MQ=255)
                                                                                gTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCCGt                                                          >  1:789775/1‑149 (MQ=255)
                                                                                 tCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGtt                                                         >  1:552091/1‑149 (MQ=255)
                                                                                   tGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTAAc                                                       >  1:143171/1‑149 (MQ=255)
                                                                                    gATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTAcc                                                      <  1:168171/149‑1 (MQ=255)
                                                                                        gCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGAc                                                  <  2:873250/149‑1 (MQ=255)
                                                                                        gCGAAGCCGGATGGCTCCATCATCAAAACGCCAATCACCGCGAACTTCCGTGAAGCTGTGAACGTACTCCAGTACTTCATCTCCACCCACGGTCATCGTAAAGGTCTGGCGGATACCGCAGTGAAAACTGCGAACTCCGGTTACCTGAc                                                  <  2:695858/149‑1 (MQ=255)
                                                                                          gAAGCCGGATTGCTCCATCATCAGAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACTTACTCCAGTACTTCATCTCCACCCATGGTGCTAGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACtc                                                <  1:811808/149‑1 (MQ=255)
                                                                                          gAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGTTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACtc                                                <  2:876536/149‑1 (MQ=255)
                                                                                                ggACGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCgtcgtc                                          <  2:946231/149‑1 (MQ=255)
                                                                                                 gATTGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCt                                         <  2:630449/149‑1 (MQ=255)
                                                                                                 gATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATCCCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGCCGCCt                                         >  2:151979/1‑149 (MQ=255)
                                                                                                       tCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGa                                   >  1:756762/1‑149 (MQ=255)
                                                                                                       tCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGa                                   >  2:75920/1‑149 (MQ=255)
                                                                                                        ccATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGAc                                  <  1:839013/149‑1 (MQ=255)
                                                                                                         catcatCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACg                                 >  1:340621/1‑149 (MQ=255)
                                                                                                           tcatcGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTg                               <  1:388591/149‑1 (MQ=255)
                                                                                                            tttcGAACCGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTgg                              <  1:793192/147‑1 (MQ=255)
                                                                                                             atcGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTCCTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGCTTACCTGACTCGTCGTCAGGTTGACGTGgc                             >  2:383007/1‑149 (MQ=255)
                                                                                                              tcGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCATTACTTCATCTCCACCCACGGCGCTCGTAAAGGTCTGTCGGATACCGCACTAAAAACTGCGAACTCCGGTGACCTGACTCGTCTTCTGTTTGACGTGgca                            >  2:793192/1‑148 (MQ=255)
                                                                                                              tcGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTgg                              >  2:792376/1‑147 (MQ=255)
                                                                                                              tcGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTgg                              <  1:792376/147‑1 (MQ=255)
                                                                                                              tcGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGgcg                            >  1:526755/1‑149 (MQ=255)
                                                                                                              tcGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGgcg                            <  1:322762/149‑1 (MQ=255)
                                                                                                                     gCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGAcc                     >  2:500230/1‑149 (MQ=255)
                                                                                                                      ccAATCACCGCGAACTTCCGTGAAGCTCTGCAAATTCGTCTGTTTTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGGCTCGTCGTCTGGTTGACGTGGCGCAGGACCt                    >  1:477974/1‑149 (MQ=255)
                                                                                                                        aaTCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtgg                  >  1:795993/1‑149 (MQ=255)
                                                                                                                        aaTCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtgg                  >  1:371432/1‑149 (MQ=255)
                                                                                                                         aTCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGACAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtggt                 <  1:621248/149‑1 (MQ=255)
                                                                                                                          tCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtggtg                <  1:158065/149‑1 (MQ=255)
                                                                                                                          tCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtggtg                <  2:795993/149‑1 (MQ=255)
                                                                                                                          tCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtggtg                <  2:820798/149‑1 (MQ=255)
                                                                                                                          tCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtggtg                <  1:160639/149‑1 (MQ=255)
                                                                                                                          tCACCGCGAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtggtg                <  1:500230/149‑1 (MQ=255)
                                                                                                                              cgcgAACTTCCGTGAAGCTCTGAACGTACTGCAGTACTTCATCTCCACCCACGATGCTCGTAAAGGTCTGGCAGCTACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCCGCACCTGGTGGTTa            >  2:598632/1‑149 (MQ=255)
                                                                                                                              cgcgAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTa            >  1:360641/1‑149 (MQ=255)
                                                                                                                                cgAACTTCCGTGAATCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATATCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTAcc          <  2:732415/149‑1 (MQ=255)
                                                                                                                                 gAACTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCg         >  1:606637/1‑149 (MQ=255)
                                                                                                                                   aCTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtggtg                >  2:113766/1‑140 (MQ=255)
                                                                                                                                   aCTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtggtg                <  1:113766/140‑1 (MQ=255)
                                                                                                                                   aCTTCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGaa       <  1:909355/149‑1 (MQ=255)
                                                                                                                                     ttCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTgg                                                                                          >  2:402335/1‑64 (MQ=255)
                                                                                                                                     ttCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTgg                                                                                          <  1:402335/64‑1 (MQ=255)
                                                                                                                                     ttCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTAc                                                       <  1:54462/99‑1 (MQ=255)
                                                                                                                                     ttCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTAc                                                       >  2:54462/1‑99 (MQ=255)
                                                                                                                                     ttCCGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGa     >  2:789906/1‑149 (MQ=255)
                                                                                                                                        cGTGAAGCTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGa  <  1:75920/149‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                              
CTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGA  >  NC_000913_3_hsa_tpiA/4187485‑4187769

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: