Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913_3_hsa_tpiA 4,111,481 G→T intergenic (+796/+116) cdh → / ← yiiQ CDP‑diacylglycerol phosphotidylhydrolase/DUF1454 family putative periplasmic protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913_3_hsa_tpiA4,111,4810GT97.4% 237.3 / NA 78intergenic (+796/+116)cdh/yiiQCDP‑diacylglycerol phosphotidylhydrolase/DUF1454 family putative periplasmic protein
Reads supporting (aligned to +/- strand):  ref base G (0/2);  new base T (37/39);  total (37/41)
Fisher's exact test for biased strand distribution p-value = 4.95e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AGTCGATATAGGCAGTAGGGGGAGCACAAACCACCTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGA  >  NC_000913_3_hsa_tpiA/4111339‑4111626
                                                                                                                                              |                                                                                                                                                 
aGTCGATATAGGCAGTAGGGGGAGCACAAACCACCTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGcc                                                                                                                                             >  2:822838/1‑149 (MQ=255)
  tCGATATAGGCAGTAGGGGGAGCACAAACCACCTCGGTCTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCAt                                                                                                                                           >  2:607261/1‑149 (MQ=255)
    gATATAGGCAGTAGGGGGAGCACAAACCACCTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCAttt                                                                                                                                         >  1:409838/1‑149 (MQ=255)
     atatAGGCAGTAGGGGGAGCACAAACCACCTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCAtttt                                                                                                                                        >  1:46130/1‑149 (MQ=255)
       gtgggCAGTAGGGGGAGCACAAACCGCCTGGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTaa                                                                                                                                      <  2:526310/146‑1 (MQ=255)
           gCAGTAGGGGGAGCACAAACCACCTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATtct                                                                                                                                  >  1:504101/1‑149 (MQ=255)
            cAGTAGGGGGAGCACAAACCACCTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATtctc                                                                                                                                 <  2:409838/149‑1 (MQ=255)
             aGTAGGGGGAGCACAAACCACCTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTcc                                                                                                                                >  2:126961/1‑149 (MQ=255)
             aGTAGGGGGAGCACAAACCACCTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTcc                                                                                                                                >  1:559703/1‑149 (MQ=255)
             aGTAGGGGGAGCACAAACCACCTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTcc                                                                                                                                <  2:764704/149‑1 (MQ=255)
              gTAGGGGGAGCACAAACCACCTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCa                                                                                                                               >  2:832017/1‑149 (MQ=255)
                  ggggAGCACAAACCACCTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCCCGCt                                                                                                                           >  2:404226/1‑149 (MQ=255)
                  ggggAGCACAAACCACCTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCt                                                                                                                           >  2:602508/1‑149 (MQ=255)
                     gAGCACAAACCACCTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTtat                                                                                                                        <  1:254725/149‑1 (MQ=255)
                       gCACAAACCACCTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATaa                                                                                                                      <  1:258606/149‑1 (MQ=255)
                         acaAACCACCTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGc                                                                                                                    <  1:875947/149‑1 (MQ=255)
                          caAACCACCTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCg                                                                                                                   >  2:201027/1‑149 (MQ=255)
                           aaaCCACCTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGa                                                                                                                  >  2:125581/1‑149 (MQ=255)
                            aaCCACCTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGaa                                                                                                                 >  2:198576/1‑149 (MQ=255)
                              ccaccTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATa                                                                                                               >  2:488988/1‑149 (MQ=255)
                                 ccTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAg                                                                                                            >  2:294883/1‑149 (MQ=255)
                                 ccTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTACCCCAGGCTCTGCTTCTGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAg                                                                                                            >  1:404211/1‑149 (MQ=255)
                                     ggTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGTCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAg                                                                                                        <  1:808081/149‑1 (MQ=255)
                                       tgtCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGAt                                                                                                      <  1:126961/149‑1 (MQ=255)
                                                   ccTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGACGAACTTCCTGGATGGCCCAACTGGAGGCCACCACGCTCATCAGCGAATAAAGGAAGATGGCCGCCCCGCa                                                                                          >  1:433597/1‑149 (MQ=255)
                                                   ccTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCa                                                                                          >  2:165469/1‑149 (MQ=255)
                                                   ccTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCa                                                                                          <  1:85087/149‑1 (MQ=255)
                                                    cTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAg                                                                                         >  1:277909/1‑149 (MQ=255)
                                                    cTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGGTCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAg                                                                                         <  1:441248/149‑1 (MQ=255)
                                                    cTTGGCCCCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAg                                                                                         <  1:472264/149‑1 (MQ=255)
                                                       ggCCGCGTTCAGAGTGCCGATGACCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGgc                                                                                      <  2:72907/149‑1 (MQ=255)
                                                         ccGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGgcag                                                                                    >  2:453575/1‑149 (MQ=255)
                                                          cgcgTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGgcagc                                                                                   >  1:141338/1‑149 (MQ=255)
                                                             gTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCACCAgg                                                                                >  1:795473/1‑149 (MQ=255)
                                                              ttCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGt                                                                               <  1:576889/149‑1 (MQ=255)
                                                                cAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCTCGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCt                                                                             <  1:841198/149‑1 (MQ=255)
                                                                cAGAGTGCCGATGAGCCCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCt                                                                             <  1:115964/149‑1 (MQ=255)
                                                                  gagTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCtgt                                                                           <  2:46130/149‑1 (MQ=255)
                                                                  gagTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCtgt                                                                           <  2:141338/149‑1 (MQ=255)
                                                                     tGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGaa                                                                        >  1:114903/1‑149 (MQ=255)
                                                                      gCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGaaa                                                                       <  1:201027/149‑1 (MQ=255)
                                                                      gCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGAGGGCCGCCCCGCAGGGCAGCAGGTCTGTGaaa                                                                       <  2:130474/149‑1 (MQ=255)
                                                                        cGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACa                                                                     <  1:602508/149‑1 (MQ=255)
                                                                        cGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACa                                                                     <  2:221629/149‑1 (MQ=255)
                                                                        cGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACa                                                                     <  1:488988/149‑1 (MQ=255)
                                                                          aTGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCAAAAAAAGACCTTCCTGCATGGCGCCATTTTAATTCTCCACGCTCATAATCGAATAAAGAAAAATGGCCCCCCCGCAGGGCAGCAGATCTGAGAAACAGt                                                                   >  2:278125/1‑149 (MQ=255)
                                                                              gCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTTTag                                                               >  2:451661/1‑149 (MQ=255)
                                                                                  ccccAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGTAGATGGCAGCCCCGCAGGGCAGCAGGTCTGTGAAACCGTAGCGAGAt                                                           >  2:135118/1‑149 (MQ=255)
                                                                                  ccccAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGAt                                                           >  1:235761/1‑149 (MQ=255)
                                                                                     cAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCa                                                        >  1:553191/1‑149 (MQ=255)
                                                                                       gACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATc                                                      <  1:832017/149‑1 (MQ=255)
                                                                                        aCTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCg                                                     <  2:114903/149‑1 (MQ=255)
                                                                                         ctctGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCgg                                                    <  2:795473/149‑1 (MQ=255)
                                                                                         ctctGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGGGAAACAGTATAGGGGTTAATCgg                                                    >  2:204078/1‑149 (MQ=255)
                                                                                              cTTCCGCCCGTTCATCTTCCAGTTTACCCCAACGAAGAACTTCATGGATGGCGCCATTTTAATTCTCCAGGCTTATAAGCGAATAAAGGAGGATGGCCGCCGCGCAGGAGAGCAGGTCTGTGAAACAGTAAAGAGATTCCTCGGCACaa                                               >  1:688990/1‑149 (MQ=255)
                                                                                               ttCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACaaa                                              <  2:761259/149‑1 (MQ=255)
                                                                                               ttCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACaaa                                              <  1:125581/149‑1 (MQ=255)
                                                                                                   gCCCGTTCATCTTCCAGTTTCCCCCAACGAACAACTTCCTGGATGGCGCCATTTTAATTCTCAACGCTTATAAGCAAATAAAAGCAGATGGCCGCCCCGCAGGCCACCAGGTCTGTCAAACACTATAGAGCTTCATCCGCACAACGgct                                          >  2:391375/1‑149 (MQ=255)
                                                                                                    cccGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGgctt                                         <  1:699253/149‑1 (MQ=255)
                                                                                                     ccGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGgcttt                                        <  1:97474/149‑1 (MQ=255)
                                                                                                      cGTTCATATTCCCGTTTCCACCCACGAAGAACTTCCTGTATGGCGCCATTTTAAGTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGgctttg                                       <  2:404211/149‑1 (MQ=255)
                                                                                                           aacTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCtttt                                  <  1:773055/147‑1 (MQ=255)
                                                                                                            tCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCttttt                                 <  1:379098/149‑1 (MQ=255)
                                                                                                              ttCCAGCTCCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGt                               <  1:204078/149‑1 (MQ=255)
                                                                                                                ccAGTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCa                             <  1:294883/149‑1 (MQ=255)
                                                                                                                  cgTTTCCCACAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTGCACGCTTATAAGCGAATAAAGGAAGATTGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCAtt                           <  2:804234/148‑1 (MQ=255)
                                                                                                                   gTTTCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGNCACNAAGGCTTTGCTTTTTGTCAttt                          >  1:833325/1‑149 (MQ=255)
                                                                                                                    tttCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTa                         >  2:9719/1‑149 (MQ=255)
                                                                                                                      tCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGca                                                  >  2:598124/1‑122 (MQ=255)
                                                                                                                      tCCCCCAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGca                                                  <  1:598124/122‑1 (MQ=255)
                                                                                                                        ccccAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTcc                     >  2:33884/1‑148 (MQ=255)
                                                                                                                         cccAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGTGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCaa                    <  1:835519/149‑1 (MQ=255)
                                                                                                                         cccAACGAAGAACTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCAGCACAAAGGCTTTGCTTTTTGTCATTTATTCaa                    >  2:591574/1‑149 (MQ=255)
                                                                                                                               gaagaaCTTCCTGGATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCCGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTc              >  1:9696/1‑149 (MQ=255)
                                                                                                                                     cTTCCTGAAGGGGGCCATTTTAATTCTCCACGCTTAGAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGa        <  2:482255/149‑1 (MQ=255)
                                                                                                                                      ttCCTGGGTGGCGCGATTTTACTTCTCCTCGTGTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGAt       <  1:391375/149‑1 (MQ=255)
                                                                                                                                           ggATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGa  <  2:553191/149‑1 (MQ=255)
                                                                                                                                           ggATGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGACTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGa  <  1:404226/149‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                                 
AGTCGATATAGGCAGTAGGGGGAGCACAAACCACCTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGA  >  NC_000913_3_hsa_tpiA/4111339‑4111626

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: