New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	3376249 =	58 (1.240)	6 (0.140)	6/256	5.1	10.3%	intergenic (+13/+30)	dcuD/sspB	putative transporter/ClpXP protease specificity enhancing factor
	?	NC_000913_3_hsa_tpiA	3376278 =	51 (1.200)					intergenic (+42/+1)	dcuD/sspB	putative transporter/ClpXP protease specificity enhancing factor
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GACAACGAAACCGTTATGTCGGTTATTGATGGCGACAAGCCAGATCACGATGATGACACTCATCCTGACGATGAACCTCCGCAGCCACCACGCGGTGGTCGACCGGCATTACGCGTTGTGAAGTAATACAAAACAGGCCCAGGCGGCCTGTTTTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_hsa_tpiA/3376404‑3376249 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgttttgtATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATAACCGACATAACGGTTTCGTTGTCTGCCGATGCCTCTTCATC  >  NC_000913_3_hsa_tpiA/3376278‑3376422                                                                                                                                                                                                                                                                                                               GACAACGAAACCGTTATGTCGGTTATTGATGGCGACAAGCCAGATCACGATGATGACACTCATCCTGACGATGAACCTCCGCAGCCACCACGCGGTGGTCGACCGGCATTACGCGTTGTGAAGTACTCCAACACAGGCCCAGACGGCCT                                                                                                                                                          >  1:672149/1‑149    AACGAAACCGTTATGTCGGTTATTGATGGCGACAAGCCAGATCACGATGATGACACTCATCCTGACGATGAACCTCCGCAGCCACCACGCGGTGGTCGACCGGCATTACGCGTTGTGAAGTAATACAAAACAGGCCCAGGCGGCCTGTT                                                                                                                                                       >  1:470004/1‑149      CGAAACCGTTATGTCGGTTATTGATGGCGACAAGCCAGATCACGATGATGACACTCATCCTGACGATGAACCTCCGCAGCCACCACGCGGTGGTCGACCGGCATTACGCGTTGTGAAGTAATACAAAACAGGCCCAGGCGGCCTGTTTT                                                                                                                                                     <  2:580951/149‑1                                                                CCTGACGATGAACCTCTGCAGCCACCACGCGGTGGTCGACCGGCATTACGCGTTGTGAAGTAATACAAAACAGGCCCAGGCGGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTC                                                                                                                        >  1:315247/1‑120                                                                CCTGACGATGAACCTCTGCAGCCACCACGCGGTGGTCGACCGGCATTACGCGTTGTGAAGTAATACAAAACAGGCCCAGGCGGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTC                                                                                                                        <  2:315247/120‑1                                                                                                         GGCATTACGCGTTGTGAAGTAATACAAAACAGGCCCAGGCGGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTG                                                       >  1:455735/1‑144                                                                                                         GGCATTACGCGTTGTGAAGTAATACAAAACAGGCCCAGGCGGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTG                                                       <  2:455735/144‑1                                                                                                                                   AAACAGGCCCAGGCGGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGA                                                                >  1:534055/1‑109                                                                                                                                   AAACAGGCCCAGGCGGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGA                                                                <  2:534055/109‑1                                                                                                                                                   CCTGTTTTGTATTACTTCACAACGGTTAATGCCGGTCGACCACGGCGTGGTTGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATAACCGACATAACGGTTTCGTTGTCTGCCGATGCCTC        <  2:548796/149‑1                                                                                                                                                   CCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATAACCGACATAACGGTTTCGTTGTCTGCCGATGCCTC        >  1:60281/1‑149                                                                                                                                                    CTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATTAGTGTCATAATCGTGATCTGGCTTGTCGCCATCAATAACCGCCAGCACGGTTTCGTTGTCTGCCGATGCCTCT       >  2:59408/1‑149                                                                                                                                                    CTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATAACCGACATAACGGTTTCGTTGTCTGCCGATGCCTCT       >  1:624832/1‑149                                                                                                                                                      GTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATAACCGACATAACGGTTTCGTTGTCTGCCGATGCCTCTTC     <  2:235133/149‑1                                                                                                                                                       TTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGGGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATAACCGACATAACGGTTTCGTTGTCTGCCGATGCCTCTTCA    >  1:34869/1‑149                                                                                                                                                         TTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATAGTGATCTGGCTTGTCGCCATCAATAACCGACATAACGGTTTCGTTGTCTTCCGGTGCCCCTTCATC  >  2:269030/1‑149                                                                                                                                                                                                                                                                                                               GACAACGAAACCGTTATGTCGGTTATTGATGGCGACAAGCCAGATCACGATGATGACACTCATCCTGACGATGAACCTCCGCAGCCACCACGCGGTGGTCGACCGGCATTACGCGTTGTGAAGTAATACAAAACAGGCCCAGGCGGCCTGTTTTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_hsa_tpiA/3376404‑3376249 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgttttgtATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATAACCGACATAACGGTTTCGTTGTCTGCCGATGCCTCTTCATC  >  NC_000913_3_hsa_tpiA/3376278‑3376422

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.