New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913_3_hsa_tpiA | 3541232 = | 39 (1.210) | 3 (0.100) | 3/282 | 4.5 | 7.9% | coding (826/2322 nt) | feoB | ferrous iron transporter protein B and GTP‑binding protein; membrane protein |
? | NC_000913_3_hsa_tpiA | 3541270 = | 33 (1.080) | coding (864/2322 nt) | feoB | ferrous iron transporter protein B and GTP‑binding protein; membrane protein | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
TGCACATTGCCGATGCGCGTTACCAGTGCATTGCTGCCATCTGTGATGTGGTAAGCAACACCCTGACGGCAGAACCCAGCCGTTTCACCACTGCGGTAGATAAAATCGTGCTCAACCGTTTCCTCGGTCTGCCGATTTTCCTCTTTGTGATGTACCTGATGTTCCTGCTGGCTATCAACATCGGCGGGGCGTTACAGCCGCTGTTTGACGTCGGCTCCGTGGCGCTATTTGTGCATGGTATTCAATGGATTGGCTACACGCTCCACTTCCCGGACTGGCTGACTA > NC_000913_3_hsa_tpiA/3541131‑3541415 | tGCACATTGCCGATGCGCGTTACCAGTGCATTGCTGCCATCTGTGATGTGGTAAGCAACACCCTGACGGCAGAACCCAGCCGTTTCACCACTGCGGTAGATAAAATCGTGCTCAACCGTTTCCTCGGTCTGCCGATTTTCCTCTTtgtg > 1:207612/1‑149 (MQ=255) gCACATTGCCGATGCGCGTTACCAGTGCATTGCTGCCATCTGTGATGTGGTAAGCAACACCCTGACGGCAGAACCCAGCCGTTTCACCACTGCGGTAGATAAAATCGTGCTCAACCGTTTCCTCGGTCTGCCGATTTTCCTCTTGGTGa < 2:53406/149‑1 (MQ=255) gATGCGCGTTACCAGTGCATTGCTGCCATCTGTGATGTGGTAAGCAACACCCTGACGGCAGAACCCAGCCGTTTCACCACTGCGGTAGATAAAATCGTGCTCAACCGTTTCCTCGGTCTGCCGATTTTCCTCTTTGTGATGTACCTGAt < 1:166460/149‑1 (MQ=255) gggTTACCAGTGCATTGCTGCCATCTGTGATGTGGTAAGCAACACCCTGACGGCAGAACCCAGCCGTTTCACCACTGCGGTAGATAAAATCGTGCTCAACCGTTTCCTCGGTCTGCCGATTTTCCTCTTTGTGATGTACCTGATGTTcc < 1:220860/147‑1 (MQ=255) tcAGTGCATTGCTTCCATCGGTGATGTGGTAAGCAACACCCTGTCGGCAGAATCCAGCCGTTTCACCACTGCGGTAGATAAAATCGTGCTCAACCGTTTCCTCGGTCTGCCGATTTTCCTCTTTGTGATGTACCTGATGTTCCTGCTgg < 2:20858/148‑1 (MQ=255) ccATCTGTGATGTGGTAAGCAAAACCCTGACGGCAGAACCCAGCCGTTTCACCACTGCGGTAGATAAAATCGTGCTCAACCGTTTCCTCGGTCTGCCGATTTTCCTCTTTGTGATGTACCTGATGTTCCTGCTGGCTATCAACATcggc > 2:347610/1‑149 (MQ=255) aTCTGTGATGTCGTGAACAACACCCTGACAGCAGAACCCAGCCGTGTCAGCACTGCGGTAGATAAAATCGTGCTCAACCGTTACCTCGGTCTGCCGATTTACCTCTTTGTGATGTACCTGATGTTCCTGCTGGCTATCAACATcggcgg > 2:515435/1‑149 (MQ=255) ggggATGTGGTAAGCAACACCCGGACGGCAGAACCCAGCCGTTTCACCACTGCGGTAGATAAAATCGTGCTCAACCGTTTCCTCGGTCTGCCGATTTTCCTCTTTGTGATGTACCTGATGTTCCTGCTGGCTATCAACATCGGCGGGGc < 2:224586/146‑1 (MQ=255) tgATGTGGTAAGCAACACCCTGACGGCAGAACCCAGCCGTTTCACCACTGCGGTAGATAAAATCGTGCTCAACCGTTTCCTCGGTCTGCCGATTTTCCTCTTTGTGATGTACCTGATGTTCCTGCTGGCTATCAAGATCGGCGGGGGGt > 1:306213/1‑149 (MQ=255) gctgTAAGCAGCAGCTTGACGGCAAAAGCTAGCCGTTTCATCGCTGTGTTAAATAAAAGCGTGCTCAACCGTTTCCTCGGTCTGCCGCGTTTCTTCTTTGTCAGGTACCTGATGTTCCTGCTGGCTATCAACATCGGCGGGGCGTTACa < 2:240008/146‑1 (MQ=255) tgGTAAGCAACCCCCTGACGGCAGAACCCAGCCGTTTCACCACTGCGGTAGATAAAATCGTGCTCAACCGTTTCCTCGGTCTGCCGATTTACCTCTTTGTGATGTACCTGATGTTCCTGCTGGCTATCAACATCGGCGGGGCGTTACAg < 1:64046/149‑1 (MQ=255) gTAAGCAACACCCTGACGGCAGCACCAAGCCGTTTCACCACTGCGGTAGATAAAATCGTGCTCAACCGCTCCCTCGGTCTGCCGGTTTTCCGCTTTGTGATGTACCTGATGTTCCTGCTGCCTATCACCATAGGCGGGGCGTTCCCGcc > 2:540583/1‑149 (MQ=255) tGACGGCAGAACCCAGCCGTTTCACCACTGCGGTAGATAAAATCGTGCTCAACCGTTTCCTCGGTCTGCCGATTTTCCTCTTTGTGATGTACCTGATGTTCCTGCTGGCTATCAACATCGGCGGGGCGTTACAGCCGCTGTTTGACGTc < 1:80086/149‑1 (MQ=255) gACGGCAGGACCCAGCCGTTTCACCACTGCGGTTGATAAAATCGTGCTCAACCGTTTCCTCGGTCTGCCGATTTTCCTCTTTGTGATGTACCTGATGTTCCTGCTGGCTATCAACATCGGCGGGGCGTTACAGCCGCTGTTTGACGTCg < 2:189032/149‑1 (MQ=255) gACGGCAGAACCCAGCCGTTTCACCACTGCGGTAGATAAAATCGTGCTCAACCGTTTCCTCGGTCTGCCGATTTTCCTCTTTGTGATGTACCTGATGTTCCTTCTGGCTATCAACATCGGCGGCGCGTTACAGCCCCCGTTTGACGTCg > 2:437872/1‑149 (MQ=255) aCGGCAGAACCCAGCCGTTTCACCACTGCGGTAGATAAAATCGTGCTCCACCGTTTTCTTGAACGGCCGATTTTCCTCTTTGTGATGTACCTGATGTTCCTGCTGGCTATCAACATCGGCGGGGCGTTACAGCCGCTGTTTGACGTCgg < 1:130539/149‑1 (MQ=255) aCGCCAGAACCCAGGTGTTTCGCCACTGCGGTAGATAAAAGCGTGCTCAACCGGTTCCTCGGTGTGCCGATTTTCCTTTTTGTGATGTACCTGATGGTCCTGCTGGCTATCGACATCGGCGGGGCGTTACAGCCGCTGTTTGAcggcgg < 2:18066/149‑1 (MQ=255) gAACCCAGCCGTTTCACCACTGCGGTAGATAAAATCGTGCTCAACCGTTTCCTCGGTCTGCCGATTTTCATCTTTGTGATGTACCTGATGTTCCTGCTGGCTATCAACATCGGCGGGGCGTTACAGCCACTGTTTGACGTCGGCTccct > 1:456042/1‑147 (MQ=255) cccAGCCGTTTCACCACTGCGGTAGATAAAATCGTGCTCAACCGTTTCCTCGGTCTGCCGATTTTCCTCTTTGTGATGTACCTGATGTTCCTTCTGGCTATCAACATCGGCGGGGCTCTCCAGCCGCTACTTAACCTCGCCTcccttgc > 2:329427/1‑144 (MQ=255) cccAGCCGTTTCACCACTGCGGTAGATAAAATCGTGCTCAACCGTTTCCTCGGTCTGCCGATTTTCCTCTTTGTGATGTACCTGATGTTCCTGCTGGCTATCAACATCGGCGGGGCGTTACAGCCGCTGTTTGACGTCGGCTCCGTGgc > 2:368158/1‑149 (MQ=255) tCACCACTGCGGTAGATAAAATCGTGCTCAACCGTTTCCTCGGTCTGCCGATTTTCCTCTTTGTGATGTACCTGATGTTCCTGGGGGGTAGCAACATCGGCGGGGCGTTACAGCCGCTGTTTGACGTCGGCTCCGTGGCGCTATTtgtg < 1:536563/149‑1 (MQ=255) cacGGCGGTAGATAAACTCGTGCTCAACCGTTTCCCCGGTCTGCCGATTTTCCTCTTTGTGATGTACCTGATGTTCCTGCTGGCTATCAACATCGGCGGGGCGTTACAGCCGCTGTTTGACGTCGGCTCCGTGGCGCTATTTGTGCATg < 2:204793/149‑1 (MQ=255) cTGCGGTAGATAAAATCGTGCTCAACCGTTTCCTCGGTCTGCCGAATTTCCTCTTTGTGGTGTACCTGATGTTCCTGCTGGCTATCAACATCGGCGGGGCGTTACAGCCGCTATTTGACGTCGGCTCCGTGGCGCTATGTGTGCATGGt > 1:103492/1‑149 (MQ=255) ctgTATATAAAAGCGTGCTCAACCTTTTTCTCGGTCTGCCGATTTTCCTCTCTGTGATGTACCTGATGTTCCTGCTGGCTATCAACATCGGCGGTGCGTTACAGCCGCTGTTTGACGTCGGCTCCGTGGCGCTATTTGTGCATGGTAtt < 2:499770/147‑1 (MQ=255) tAGATAACATCGTGCTCAACCGTTTCCTCGGTCTGCCGACTTCCCTCTTTGTGATGTACCTGATGTTTCTGCTGCCTATCAACATCGGCGGGGCGTTACAGCCGATGTTTCACGTCGGCTCCGTGGCGCTATTTCTGCATGGTATTCaa < 2:413704/149‑1 (MQ=255) aaaaCCGTGCTGCACCGTCTGCTCGGTCTGCCCATTTTCCACTTTGTGATGTCCCTGATGTTCCTGCTGGCTATCAACATCGGCGGGGCGTTACAGCCGGTGTTTGACGTCGGCTCCGTGGCGCTATTTGTGCATGGTATTCAATGGAt < 2:123009/149‑1 (MQ=255) tCGTGCTCAACCGTTTCCTCGGTCTGCCGATTTTCCTTTTTGTTATGTACTTTAAGTGTACGCTGTCTCACAGTATTTTCGGAGCGTTACAGCCTCGATTTGACGTCGGCTGCGTGGCGCTATTGGTGCATTGTCGTCAATgcaatttg > 2:541275/1‑142 (MQ=255) tCGTGCTCAACCGTTTCCTCGGTCTGCCGATTTTCCTCTTTGTGATGTACCTGATGTTCCTGCTGGCTATCAACATCGGCGGGGCGTTACAGCCGCTGTTTGACGTCGGCTCCGTGGCGCTATTTGTGCATGGTATTCAATGGATTGGc > 1:512106/1‑149 (MQ=255) cGTGCTCAACCGTTTCCTCGGTCTGCCGATTTTCCTCTTTGTGATGTACCTGATGTTCCTGCTGGCTATCAACATCGGCGGGGCGTTACAGCCGCTGTTTGACGTCGGCTCCGTGGCGCTATTTGTGCATGGTATTCAATGGATTGGCt < 1:347610/149‑1 (MQ=255) tGCTCAACCGTTTCCTCGGTCTGCCGATTTTCCTCTTTGTGATGTACCTGATGTTCCTGCTGGCTATCAACATCGGCGGGGCGTTACAGCCGCTGTTTGACGTCGTCTCCGTGGCGCTTTGTGTGCTTGGTATTCAATGGATTTGCTac > 1:49388/1‑149 (MQ=255) aaCCGTTTCCTCGGTCTGCCGATTTTCCTCTTTGTGATGTACCTGATGTTCCTGCTGGCTATCAACATCGGCGGGGCGTTACAGCCGCTGTTTGACGTCGGCTCCGTGGCGCTATTTGTGCATGGTATTCACTGGATTGGCTACACGCt > 1:121315/1‑149 (MQ=255) cTCGGTCTGCCGATTTTCCTCTTTGTGATGTACCTGATGTTCCTGCTGGCTATCAACATCGGCGGGGCGTTACAGCCGCTGTTTGACGTCGGCTCCGTGGCGCTATTTGTGCATGGTATTCAATGGATTGGCTACACGCTCCACTTccc > 1:272201/1‑149 (MQ=255) ttccGATTTTCCCATTTGTGACGAACGTGATGTTCCTGCTGGCTATAAACATAGGCTGGGCGTTAAAGCCGCTGTTTGACTTCGGCTCCGTGGCGGTATTTGTGCATGGTATTCAATTGATTATCTACACGCTCCCCTTCCCCGACTgg > 2:424959/3‑149 (MQ=255) aTTTTCCTCTTTGTGATGTACCTGATGTTCCTGCTGGCTATCAACATCGGCGGGGCGTTACAGCCGCTGTTTGACGTCGGCTCCGTGGCGCTATTTGTGCATGGTATTCAATGGATTGGCTACACGCTCCACTTCCCGGACTGGCTGat > 2:319530/1‑148 (MQ=255) tttCCTCTTTGTGATGTACCTGATGTTCCTGCTGGCTATCAACATCGGCGGGGCGTTACAGCCGCTGTTTGACGTCGGCTCCGTGGCGCTATTTGTGCATGGTATTCAATGGATTGGCTCCACGCTCCACTTCCCGGACTAGCTGACTa > 1:231376/1‑149 (MQ=255) | TGCACATTGCCGATGCGCGTTACCAGTGCATTGCTGCCATCTGTGATGTGGTAAGCAACACCCTGACGGCAGAACCCAGCCGTTTCACCACTGCGGTAGATAAAATCGTGCTCAACCGTTTCCTCGGTCTGCCGATTTTCCTCTTTGTGATGTACCTGATGTTCCTGCTGGCTATCAACATCGGCGGGGCGTTACAGCCGCTGTTTGACGTCGGCTCCGTGGCGCTATTTGTGCATGGTATTCAATGGATTGGCTACACGCTCCACTTCCCGGACTGGCTGACTA > NC_000913_3_hsa_tpiA/3541131‑3541415 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |