New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	= 4136014	90 (1.880)	5 (0.110)	5/268	5.8	5.4%	intergenic (+17/‑76)	katG/yijE	catalase‑peroxidase HPI, heme b‑containing/EamA‑like transporter family protein
	?	NC_000913_3_hsa_tpiA	= 4136030	91 (2.030)					intergenic (+33/‑60)	katG/yijE	catalase‑peroxidase HPI, heme b‑containing/EamA‑like transporter family protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGGTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_hsa_tpiA/4135861‑4136014 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgttcagcgACTGCCAGCAAGCAGCCGCTGAACGGGGTCAGATTACAGCAGGTCGAAACGGTCGAGGTTCATCACTTTCACCCATGCCGCCACGAAGTCTTTAACAAACTTCTCGTGGGCATCGCTACTGGCGTAAACTTCCGCCACCGCACGCA  <  NC_000913_3_hsa_tpiA/4136030‑4135885                                                                                                                                                                                                                                                                                                              tgtTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTT                                                                                                                                                         <  1:658222/146‑1  GGTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGACAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTC                                                                                                                                                        >  1:492942/1‑149  GGTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTC                                                                                                                                                        >  2:451577/1‑149     GTTTGGTTCTAACTCCGTCCTGCGTGCGGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGC                                                                                                                                                     <  2:597524/149‑1                                  TGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGACTGCCAGCAAGCAGCCGCTGAACGG                                                                                                                          >  1:485912/1‑147                                  TGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGACTGCCAGCAAGCAGCCGCTGAACGG                                                                                                                          <  2:485912/147‑1                                               cggCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGGGGCGGCATGGGTGAAAGTGCTGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGACTGCCAGCAAGCAGCCGCTGAACGGGGTCAGATTACAGCA                                                                                                           <  2:272529/146‑1                                                                                                     GAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGACTGCCAGCAAGCAGCCGCTGAAC                                                                                                                            <  1:354702/78‑1                                                                                                     GAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGACTGCCAGCAAGCAGCCGCTGAAC                                                                                                                            >  2:354702/1‑78                                                                                                                                                   GTTCAGCGACTGCCAGCAAGCAGCCGCTGAACGGGGTCAGATTACAGCAGGTCGAAACGGTCGAGGTTCATCACTTTCACCCAGGCCGCCACGAAGTCTTTAACAAACTTCTCGTGGGCATCGCTACTGGCGTAAACTTCCGCCACCGC       >  2:488789/1‑149                                                                                                                                                       AGCGACTGCCAGCAAGCCGCCGCTGACCGGGGTCCGATTCAAGCAGGTCGAAACGGTCGAGGTTCATCACTTTCACCCAGGCCGCCACGAAGTCTTTAACAAACTTCTCGTGGGCATCGCTACTGGCGTAAACTTCCGCCACCGCACGC   <  2:490110/149‑1                                                                                                                                                        GCGACTGCCAGCAAGCCGCCGCTGAACGGGGTCAGATTACAGCAGGTCGAAACGGTCGAGGTTCATCACTTTCACCCATGCCGCCACGAAGTCTTTAACAAACTTCTCGTGGGCATCGCTACTGGCGTAAACTTCCGCCACCGCACGCA  <  1:443668/149‑1                                                                                                                                                        GCGACTACCAGCAAGCAGCCGCTGAACGGGGTCAGATTACAGCAGGTCGAAACGGTCGAGGTTCATCACTTTCACCCATGCCGCCACGAAGTCT                                                         <  1:199961/94‑1                                                                                                                                                        GCGACTACCAGCAAGCAGCCGCTGAACGGGGTCAGATTACAGCAGGTCGAAACGGTCGAGGTTCATCACTTTCACCCATGCCGCCACGAAGTCT                                                         >  2:199961/1‑94                                                                                                                                                                                                                                                                                                              TGGTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_hsa_tpiA/4135861‑4136014 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgttcagcgACTGCCAGCAAGCAGCCGCTGAACGGGGTCAGATTACAGCAGGTCGAAACGGTCGAGGTTCATCACTTTCACCCATGCCGCCACGAAGTCTTTAACAAACTTCTCGTGGGCATCGCTACTGGCGTAAACTTCCGCCACCGCACGCA  <  NC_000913_3_hsa_tpiA/4136030‑4135885

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.