New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	2746211 =	64 (1.310)	4 (0.090)	4/266	6.5	6.1%	intergenic (‑26/+223)	rpsP/ffh	30S ribosomal subunit protein S16/Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)
	?	NC_000913_3_hsa_tpiA	2746241 =	62 (1.340)					intergenic (‑56/+193)	rpsP/ffh	30S ribosomal subunit protein S16/Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTGACTGCGCGCACTCCGGCACCAAACTGGCTGCACCGCCGACGGCCTTTTACAGCAGAGTTAGCAACTGTTGATTGCAATTCCCGCAAAAATGAGTAAAATTTTCGGGCTTTTAATATGACACCGGACTCCGTTCCTCGATGGGGTCCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_hsa_tpiA/2746362‑2746211 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtccggtGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGA  >  NC_000913_3_hsa_tpiA/2746241‑2746388                                                                                                                                                                                                                                                                                                              GTGACTGCGCGCACTCCGGCACCAAACTGGCTGCACCGCCGACGGCCTTTTACAGCAGAGTTAGCAACTGTTGATTGCAATTCCCGCAAAAATGAGTAAAATTTTCGGGCTTTTAATATGACACCGGACTCCGTTCCTCGATGGGGTCC                                                                                                                                                         >  1:581003/1‑149  TGACTGCGCGAACTCCGGCACCAAACTGGCTGCACCGCCGACGGCCTTTTACAGCAGAGTTAGCAACTGTTGATTGCAATTCCCGCAAAAATGAGTAAAATTTTCGGGCTTTTAATATGACACCGGACTCCGTTCCTCGATGGGGTCCG                                                                                                                                                        <  1:549069/149‑1                                                                                                              CTTTTAATATGACACCGGACTCCGTTCCTCGATGGGGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCG                                            >  1:250928/1‑149                                                                                                                TTTAATATGACACCGGACTCCGTTCCTCGATGGGGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTG                                                  >  1:355574/1‑141                                                                                                                TTTAATATGACACCGGACTCCGTTCCTCGATGGGGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTG                                                  <  2:355574/141‑1                                                                                                                      ATGACACCGGACTCCGTTCCTCGATGGGGTCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGC                                    <  2:250928/149‑1                                                                                                                                                   TCCGGTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGT       >  1:442525/1‑149                                                                                                                                                     CGGTGTTATATTAAAAGCCCGAAAATTTTGCTCATTTTTGCGGGAATTGCACTCAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGA     <  2:819853/149‑1                                                                                                                                                       GTGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAAAAGGCGGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGAGTGAACGCAGTACGggggg   >  2:354984/1‑144                                                                                                                                                        TGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGA  <  1:725485/149‑1                                                                                                                                                                                                                                                                                                              GTGACTGCGCGCACTCCGGCACCAAACTGGCTGCACCGCCGACGGCCTTTTACAGCAGAGTTAGCAACTGTTGATTGCAATTCCCGCAAAAATGAGTAAAATTTTCGGGCTTTTAATATGACACCGGACTCCGTTCCTCGATGGGGTCCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_hsa_tpiA/2746362‑2746211 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtccggtGTCATATTAAAAGCCCGAAAATTTTACTCATTTTTGCGGGAATTGCAATCAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGA  >  NC_000913_3_hsa_tpiA/2746241‑2746388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.