New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA = 4484368NA (NA)6 (0.110) 5/264 7.1 NA noncoding (54/84 nt) REP342 (repetitive extragenic palindromic) element; contains 2 REP sequences REP342 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913_3_hsa_tpiA = 4606631 NA (NA)noncoding (92/92 nt) REP351 (repetitive extragenic palindromic) element; contains 2 REP sequences REP351 (repetitive extragenic palindromic) element; contains 2 REP sequences
Rejected: Coverage evenness skew score above cutoff.

TGGTGTCATTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGACCGGTGGCGCCTTTTGCTTTACCAGAACGCCA  >  NC_000913_3_hsa_tpiA/4484223‑4484517
                                                                                                                                                 |                                                                                                                                                     
tggtgTCATTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCg                                                                                                                                                   >  2:308295/1‑150 (MQ=255)
     tCATTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATaa                                                                                                                                              <  2:169329/150‑1 (MQ=255)
       aTTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAgg                                                                                                                                            <  2:358094/150‑1 (MQ=255)
        ttGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATCAGGc                                                                                                                                           >  2:159252/1‑150 (MQ=255)
          gTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGt                                                                                                                                         <  1:308295/150‑1 (MQ=255)
           tCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGtt                                                                                                                                        <  1:470494/150‑1 (MQ=255)
             cAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTGGGTCGGCTAAGGCGTTcc                                                                                                                                      >  1:443052/1‑149 (MQ=255)
              aGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCAc                                                                                                                                     >  2:458094/1‑150 (MQ=255)
               gcaGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTAGTGGTGGATTTAAATACGGATGAGGGATACACCGCAGCGCCTGTTGCGACGCTGTTGTGTCTTATCGGGCCTCGGATTTCAGTGCTGTGTCGGTTGGATAAGACTTTCCcg                                                                                                                                    >  2:198099/3‑150 (MQ=255)
               gAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATAGGCATTAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTTTCAGGCCTACGAGTTCAGTGCTGTGTGGGTCGGATAAGGCGTTccag                                                                                                                                    >  2:412085/1‑147 (MQ=255)
                            cgcgTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCATGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCaa                                                                                                                       >  2:881488/1‑150 (MQ=255)
                            cgcgTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACAGCAGCGCCTGATGCGACGCTGTTGTCAACTAATAGTCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCaa                                                                                                                       >  1:238626/1‑150 (MQ=38)
                               gTTTTTCATAAATGTGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCAGCCGGCAATaa                                                                                                                    <  1:999240/150‑1 (MQ=255)
                                  tttCATAAATGGGGCTTCTTGTGGTGGATGTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAg                                                                                                                 <  2:428713/150‑1 (MQ=255)
                                      aTAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCtt                                                                                                             <  1:350170/150‑1 (MQ=255)
                                      aTAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCtt                                                                                                             >  1:367867/1‑150 (MQ=255)
                                        aaaTGGGGCTTCTTGTTGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGc                                                                                                           <  2:867516/150‑1 (MQ=255)
                                        aaaTGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGc                                                                                                           >  1:861526/1‑150 (MQ=255)
                                        aaaTGGGGCTTCTTGGGGTGGATTTAAATACGCATAAGGTATACACTGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGc                                                                                                           <  2:870422/150‑1 (MQ=255)
                                          aTGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAGTAACAGCCTTGCCt                                                                                                         >  1:417234/1‑150 (MQ=255)
                                              ggCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCAGGCCGCATCCGGCAATAACAGGCTTGCCTGTCg                                                                                                     >  1:342849/1‑150 (MQ=255)
                                                 ttcttGTGGTTGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTCTGTCGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCaa                                                                                                  <  1:460925/150‑1 (MQ=255)
                                                    ttGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTa                                                                                               >  1:573270/1‑150 (MQ=255)
                                                         gtggATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCtt                                                                                          >  2:473484/1‑150 (MQ=255)
                                                         gtggATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGCTATATTATCACTTTCACGCCGCATCCGGCCATAACAGCCTTGCCTGACGCAATTACTCtt                                                                                          >  1:802792/1‑150 (MQ=255)
                                                          tggATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAGTAACAGCCTTGCCTGACGCAATTCCTCTTc                                                                                         >  2:527501/1‑150 (MQ=255)
                                                               ttAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGt                                                                                    <  1:458094/150‑1 (MQ=255)
                                                                   aTACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACACCCTTGCCCGACGCAACTACTCCCCGcccctaac                                                                                >  2:133546/1‑144 (MQ=38)
                                                                      cGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAAccc                                                                             >  2:855818/1‑150 (MQ=255)
                                                                          tCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGGAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACGGCCTTGCCTGACGCCAGTACTATTCGCCGGTAAAACCAgcc                                                                         >  1:14913/1‑149 (MQ=38)
                                                                             ggTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCgg                                                                      <  1:364762/150‑1 (MQ=255)
                                                                              gTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGt                                                                     <  1:855818/150‑1 (MQ=255)
                                                                              gTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCACCGCGGt                                                                     >  2:285857/1‑150 (MQ=255)
                                                                                ataCACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGttt                                                                   >  2:301783/1‑150 (MQ=255)
                                                                                 taaacCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCCGGCCAGCGAGGTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACGCCGCGCGGGTTa                                                                  >  1:297740/4‑150 (MQ=38)
                                                                                 taCACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACCCCATTACTCTTCGCCGTTAAACCCAGCCCGGTTTa                                                                  >  2:323088/1‑150 (MQ=255)
                                                                                    acCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACa                                                                                                                  <  1:865870/99‑1 (MQ=255)
                                                                                    acCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACa                                                                                                                  >  2:865870/1‑99 (MQ=255)
                                                                                     ccGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAg                                                              <  2:861526/150‑1 (MQ=255)
                                                                                      cGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCTTATGGGATTAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAgg                                                             >  1:1006100/1‑150 (MQ=39)
                                                                                       gCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGa                                                            <  2:816996/150‑1 (MQ=255)
                                                                                        cAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGaa                                                           <  1:983165/150‑1 (MQ=255)
                                                                                         aGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAAc                                                          >  1:38825/1‑150 (MQ=255)
                                                                                           cgcCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGCGTTAACCGGAACtg                                                        >  1:501495/1‑150 (MQ=255)
                                                                                            gtcTGGTGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCACCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACtgt                                                       <  1:310153/148‑1 (MQ=255)
                                                                                            gcCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACtgt                                                       <  1:384651/150‑1 (MQ=255)
                                                                                              cTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGc                                                     <  2:38825/150‑1 (MQ=255)
                                                                                              cTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCAGTTAAACCCAGCGCGGTTTAACAGGAACTGTGc                                                     <  1:759822/150‑1 (MQ=255)
                                                                                                   gCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCa                                                >  1:955827/1‑150 (MQ=255)
                                                                                                     gACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCAcgcc                                                                                                                                  >  2:657385/1‑66 (MQ=255)
                                                                                                     gACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCAcgcc                                                                                                                                  <  1:657385/66‑1 (MQ=255)
                                                                                                                gtCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATACCAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCCCGGTTTAACAGGAACTGTGCCAGCAACACTACCCgacg                                   >  2:567879/1‑150 (MQ=255)
                                                                                                                 tCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCTGATAAGGCGCTGACGCCTCATCCAGCAATAACAGCCTTGCCTGACGGCATTACTCTTAGCCAATAAACCCAGCGCGGTTTCACAGGAACTGTGCCACCAACCCTACCgaccgc                                  >  2:126112/1‑145 (MQ=255)
                                                                                                                   ttATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGAcc                                >  1:742550/1‑150 (MQ=255)
                                                                                                                   ttATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGAcc                                >  1:851553/1‑150 (MQ=255)
                                                                                                                      tCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAAc                                                                                                                   >  2:825207/1‑64 (MQ=255)
                                                                                                                      tCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAAc                                                                                                                   <  1:825207/64‑1 (MQ=255)
                                                                                                                        aGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCAATGACTGAAACGATATCTGGGGAGCGTGGAACCCAGCGCGGGTTAACAGGAACTGTGCCAGCACCGCTACCGGCCGACCGGTgg                           >  2:628681/1‑150 (MQ=21)
                                                                                                                            cTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGACCGGTGGCGcc                       <  1:569483/150‑1 (MQ=255)
                                                                                                                            cTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGACCGGTGGCGcc                       >  2:477783/1‑150 (MQ=255)
                                                                                                                            cTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGACCGGTGGCGcc                       >  1:842963/1‑150 (MQ=255)
                                                                                                                             tACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGACCGGTGGCGCCt                      >  2:840463/1‑150 (MQ=255)
                                                                                                                                gAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGTAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGACCGGTGGCGCCtttt                   >  2:6165/1‑150 (MQ=255)
                                                                                                                                 aGTTCAGGGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGACCGGTGGCGCCTTTTg                  <  2:238626/150‑1 (MQ=255)
                                                                                                                                  gTTCAGGGCTGTCTAGGTCGGCTACGGTGTTCATGCCGCATCCGCCAATAACCGCCTTGCCTGACGCAATCACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGACCGGTGGCGCCTTTTGc                 <  1:595798/150‑1 (MQ=255)
                                                                                                                                   ttCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGACCGGTGGCGCCTTTTGCt                <  1:301783/150‑1 (MQ=255)
                                                                                                                                   ttCAGTGCTGGGTAGGTCGGATAAGGCGTGTCCGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGACCGGTGGCGCCTTTTGCt                <  2:450551/150‑1 (MQ=255)
                                                                                                                                            ttgtAGCACGAATAAGTCGTTCCGGTGGCACCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGACCGGTGGCGCCTTTTGCTTTACCAGaa       <  2:1025411/149‑1 (MQ=255)
                                                                                                                                              gtAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGACCGGTGGCGCCTTTTGCTTTACCAGAAca     >  1:1025411/1‑149 (MQ=255)
                                                                                                                                                aGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGACCGGTGGCGCCTTTTGCTTTACCAGAACGcc   >  1:290100/1‑150 (MQ=255)
                                                                                                                                                 ggTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGACCGGTGGCGCCTTTTGCTTTACCAGAACGctg  >  2:978968/1‑148 (MQ=255)
                                                                                                                                                 |                                                                                                                                                     
TGGTGTCATTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGACCGGTGGCGCCTTTTGCTTTACCAGAACGCCA  >  NC_000913_3_hsa_tpiA/4484223‑4484517

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.