New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	= 173588	NA (NA)	7 (0.130)	6/264	6.6	NA	noncoding (85/85 nt)	REP13 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP13 (repetitive extragenic palindromic) element; contains 2 REP sequences
	?	NC_000913_3_hsa_tpiA	= 4484368	NA (NA)					noncoding (54/84 nt)	REP342 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP342 (repetitive extragenic palindromic) element; contains 2 REP sequences
Rejected: Coverage evenness skew score above cutoff.

TAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAACACCTTCGTCCAGCATCATATGGA  >  NC_000913_3_hsa_tpiA/173442‑173735                                                                                                                                                   |                                                                                                                                                    tAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTGAACGCCTTATCCGAccta                                                                                                                                                  <  1:863559/150‑4 (MQ=255)    tttttCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGCCAAAccc                                                                                                                                               >  1:481566/1‑149 (MQ=255)     ttttCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATCCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCAt                                                                                                                                              <  1:278364/150‑1 (MQ=255)          cATATTACGGCCCTGTACGTCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTgg                                                                                                                                         <  2:358568/150‑1 (MQ=255)           atatAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCAGGCTggg                                                                                                                                        >  1:688406/1‑149 (MQ=255)           atatAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGATCGGATAAGGCGTTCACCCCGCATCCGACAAACCATGCTGGa                                                                                                                                        >  2:109354/1‑150 (MQ=255)           atatAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGCGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGa                                                                                                                                        <  2:937264/150‑1 (MQ=255)           atatAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGGCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGa                                                                                                                                        <  2:673876/150‑1 (MQ=255)             ataACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATc                                                                                                                                      >  2:449553/1‑150 (MQ=255)                       tGTACTCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGTGACGCTGGCGCGTCTTATCGGGCCTACAAAAGGCCCCGAGTCGTAGTTCGGATAAGTCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGc                                                                                                                            <  1:865875/150‑1 (MQ=39)                             ccTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCAAATCTCCGctggggc                                                                                                                      <  2:529062/150‑7 (MQ=38)                              ccggACGGAGAAAGGGTTTACGGGACAACGGACGCCCGACGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACAcc                                                                                                                     <  2:163749/148‑1 (MQ=38)                              cTGGGCGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCGGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCAGACAAACCATGCTGGATCACAACTTCGCAAACAcc                                                                                                                     <  2:897522/150‑1 (MQ=255)                                  aCGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACACCTTAGCAAACACCCGAc                                                                                                                 <  2:639970/150‑1 (MQ=255)                                      aTAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACTCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGCCGTgc                                                                                                             >  2:641808/1‑150 (MQ=255)                                      aTAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACCCCCGCCCTgc                                                                                                             >  2:641398/1‑150 (MQ=255)                                      aTAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTgc                                                                                                             <  1:361521/150‑1 (MQ=255)                                           gCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCAt                                                                                                        >  1:478820/1‑150 (MQ=255)                                             gTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGACGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCAACg                                                                                                      >  1:824429/1‑150 (MQ=255)                                                 aCGCGACAACGGATGCCCGATGCGTCGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGACGCATCGATgg                                                                                                  >  2:406758/1‑150 (MQ=255)                                                  cgcgGCAACGGATGCCCGATGCGACGCTGGCGCGCCTCATGGGGCGTAGAACCGGGCCGGTATCGTAGGTTGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGACCACAACTTCGCAAACACCCGACGTGCAGCATCGATGgt                                                                                                 <  2:774824/150‑1 (MQ=37)                                                  cgcgACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGgt                                                                                                 <  2:531413/150‑1 (MQ=255)                                                   gcgACAACGGATGCCCGATGCGACGCTGGGGCGTCTTATCGGGCGTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGgtg                                                                                                <  2:570667/150‑1 (MQ=255)                                                     gACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCATACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGtt                                                                                              >  1:960358/1‑150 (MQ=255)                                                       cAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATca                                                                                                                                     <  2:911713/109‑1 (MQ=255)                                                       cAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATca                                                                                                                                     >  1:911713/1‑109 (MQ=255)                                                        aaCGGATTCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTAtt                                                                                           <  1:389641/150‑1 (MQ=255)                                                          cGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGa                                                                                         >  1:744384/1‑150 (MQ=255)                                                          cGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGa                                                                                         <  1:449553/150‑1 (MQ=255)                                                                 ccGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTgcag                                                                                                           <  1:351920/125‑1 (MQ=255)                                                                 ccGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTgcag                                                                                                           >  2:351920/1‑125 (MQ=255)                                                                  cggtGCGACGCTGTGTCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTcc                                                                                 <  2:489333/147‑1 (MQ=255)                                                                  cGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATg                                                                                                   <  1:338/132‑1 (MQ=255)                                                                  cGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATg                                                                                                   >  2:338/1‑132 (MQ=255)                                                                  cGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCACCATCGATGGTGTTATTGATATCTTcc                                                                                 >  1:597653/1‑150 (MQ=255)                                                                   gATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGGTGTCTTccc                                                                                >  1:510834/1‑149 (MQ=255)                                                                    aTGCGACGCTGGCGCGTCTTATCGAGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCAt                                                                               >  1:885887/1‑150 (MQ=255)                                                                     tGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATg                                                                              <  2:885887/150‑1 (MQ=255)                                                                           gCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATTCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTgc                                                                        <  1:657826/150‑1 (MQ=255)                                                                              ggCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGcc                                                                     >  2:510864/1‑150 (MQ=255)                                                                                   gTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACggc                                                                >  2:966105/1‑149 (MQ=255)                                                                                   gTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGa                                                                <  2:679010/150‑1 (MQ=255)                                                                                     cTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCAACGATGGGGTTATTGATATCTTCCATGCTGTGCGCCACGGACa                                                              >  2:369370/1‑150 (MQ=255)                                                                                         tCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATaaa                                                          <  1:453137/150‑1 (MQ=255)                                                                                           gggCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGa                                                                <  1:1011853/142‑1 (MQ=255)                                                                                           gggCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGa                                                                >  2:1011853/1‑142 (MQ=255)                                                                                            ggCCTACAAACGGCCCCGAATCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGcc                                                       <  1:895842/150‑1 (MQ=255)                                                                                              ccTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCCCGGACATAAAGCCCg                                                     >  2:145197/1‑150 (MQ=255)                                                                                               cTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGc                                                    <  1:513771/150‑1 (MQ=255)                                                                                                tACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCt                                                   >  1:58674/1‑150 (MQ=255)                                                                                                 aCAAGCGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCtt                                                  <  1:307637/150‑1 (MQ=255)                                                                                                   aaaCGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCCACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTTCCCCACCGACATACAGCCCGCTTCa                                                >  2:101010/1‑150 (MQ=39)                                                                                                   aaaCGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGCTGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCTTCa                                                >  1:671063/1‑150 (MQ=255)                                                                                                     aCGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCTTCaaa                                              >  2:562962/1‑150 (MQ=255)                                                                                                           ccGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGc                                                                                                                            >  2:913565/1‑66 (MQ=255)                                                                                                           ccGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGc                                                                                                                            <  1:913565/66‑1 (MQ=255)                                                                                                           ccGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGTTGGTTTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGa                                        <  1:966105/150‑1 (MQ=255)                                                                                                            cGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGAc                                       >  1:78354/1‑150 (MQ=255)                                                                                                               aTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGt                                    <  1:706932/150‑1 (MQ=255)                                                                                                                tCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTg                                   >  2:549912/1‑150 (MQ=255)                                                                                                                 cggaGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGc                                  <  1:295217/147‑1 (MQ=255)                                                                                                                  gTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTCCGCCACGGACATAAAGCCCGCTTCAAACGCTGACAGTGcc                                 >  1:268252/1‑150 (MQ=255)                                                                                                                   tAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGa                                                                <  1:379711/118‑1 (MQ=255)                                                                                                                   tAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGa                                                                >  2:379711/1‑118 (MQ=255)                                                                                                                   tAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCa                                >  1:664435/1‑150 (MQ=255)                                                                                                                     ggTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGCTGCCAgg                              >  2:748090/1‑150 (MQ=255)                                                                                                                      gTCGGATCAAGAGTTCACGCCGCATCCGACAAACCATGCTGGATCAGAGCTTAGGCCGGGCGGTGCGGGCGGCATCGATGGTGTTCTGGACGTCGTTCATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGt                             <  2:478820/150‑1 (MQ=255)                                                                                                                       tCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTa                            <  2:744384/150‑1 (MQ=255)                                                                                                                          gATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCTCCACGGACATAAAGCCCGCTTCAGACGCTGACGGTCCCAAGTAAac                         >  2:126267/1‑150 (MQ=255)                                                                                                                          gATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAac                         >  2:720733/1‑150 (MQ=255)                                                                                                                           aTAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAaca                        <  2:370946/150‑1 (MQ=255)                                                                                                                              aGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATACTGTTCGTTAGGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAACACCt                     >  1:802347/1‑150 (MQ=255)                                                                                                                               ggCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAACACCtt                    >  2:821465/1‑150 (MQ=255)                                                                                                                                gCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAACACCTTc                   >  1:77510/1‑150 (MQ=255)                                                                                                                                gCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAACACCTTc                   <  2:940915/150‑1 (MQ=255)                                                                                                                                gCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATAGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAACACCTTc                   <  2:824429/150‑1 (MQ=255)                                                                                                                                 cGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAACACCTTCg                  <  2:494286/150‑1 (MQ=255)                                                                                                                                 cGTTCACGCCGCATCCGACAAACCATGCTGGATAACATCTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTTATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCGGGTAAACACCTTCg                  <  2:715979/150‑1 (MQ=255)                                                                                                                                     cACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAACACCTTCGTCCa              <  2:688406/150‑1 (MQ=255)                                                                                                                                      ccgccgcACCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAACACCTTCGTCCAg             <  1:718129/149‑1 (MQ=255)                                                                                                                                            cATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAACACCTTCGTCCAGcatcat       <  1:821465/150‑1 (MQ=255)                                                                                                                                              tCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCAt                                                                               >  2:307576/1‑76 (MQ=255)                                                                                                                                              tCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCAt                                                                               <  1:307576/76‑1 (MQ=255)                                                                                                                                                 gACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAAGTAGACACCTTCGTCCAGAATCATATGga  >  2:144150/1‑150 (MQ=255)                                                                                                                                                   |                                                                                                                                                    TAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCACAACTTCGCAAACACCCGACGTGCAGCATCGATGGTGTTATTGATATCTTCCATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAACACCTTCGTCCAGCATCATATGGA  >  NC_000913_3_hsa_tpiA/173442‑173735

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.