| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_tpiA | = 1502326 | 52 (0.870) | 5 (0.090) | 5/262 | 7.7 | 9.6% | intergenic (+171/‑131) | tehB/ydcL | tellurite, selenium methyltransferase, SAM‑dependent; tellurite, selenium resistance protein/lipoprotein |
| ? | NC_000913_3_hsa_tpiA | = 1502348 | 46 (0.820) | intergenic (+193/‑109) | tehB/ydcL | tellurite, selenium methyltransferase, SAM‑dependent; tellurite, selenium resistance protein/lipoprotein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AAACGCGTGAAAATTCCCCACGCTGAGATGATTTACTGTTCTTCTTTTCGGTAAGCATATTTTTTATCGAAGGGATGTGAAATTAATCACAGTAGTCGAAGTTTTTAGCAGCTTAACTTACTGAAATTTAAGTACTGATGATTGACTTAGCCC‑CTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_hsa_tpiA/1502169‑1502326‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccc‑cttttCAGACGACATAGTCAATGCCGAAAAAGGGGCTAAGTCAATCATCAGTACTTAAATTTCAGTAAGTTAAGCTGCTAAAAACTTCGACTACTGTGATTAATTTCACATCCCTTCGATAAAAAATATGCTTACCGAAAAGAAGAACAGTA < NC_000913_3_hsa_tpiA/1502348‑1502202 AAACGCGTGAAAATTCCCCACGCTGAGATGATTTACTGTTCTTCTTTTCGGTAAGCATATTTTTTATCGAAGGGATGTGAAATTAATCACAGTAGTCGAAGTTTTTAGCAGCTTAACTTACTGAAATTTAAGTACTGATGATTGACTTA < 1:854329/149‑1AAACGCGTGAAAATTCCCCACCCTGAGATGATTTACTGTTCTTCTTTTCGGTAAGCATATTTTTTATCGAAGGGATGTGAAATTATTCACATTAGTCGAAGTTTTTAGCAGCTTAACTTACTGAAATTTAAGTACTGATGATTGACTTA < 1:677010/149‑1 GTGAAAATTCCCCACGCTGCGATGATTTACTGTTCTTCTTTTCGGTAAGCATATTTTTTATCGAAGGGATGTGAAATTAATCACAGTAGTCGAAGTTTTTAGCAGCTTAACTTACTGAAATTTAAGTACTGATGATTGACTTAGCCC‑CT < 1:368815/149‑1 AATTCCCCACGCTGAGATGATTTACTGTTCTTCTTTTCGGTAAGCATATTTTTTATCGAAGGGATGTGAAATTAATCACAGTAGTCGAAGTTTTTAGCAGCTTAACTTACTGAAATTTAAGTACTGATGATTGACTTAGCCCACTTTTC < 2:14469/149‑1 GTAGTCGAAGTTTTTAGCAGCTTAACTTACTGAAATTTAAGTACTGATGATTGACTTAGCCC‑CTTTTCAGACGACATAGTCAATGCCGAAAAAGGGGCTAAGTCAATCATCAGTACTTAAATTT < 1:436461/124‑1 GTAGTCGAAGTTTTTAGCAGCTTAACTTACTGAAATTTAAGTACTGATGATTGACTTAGCCC‑CTTTTCAGACGACATAGTCAATGCCGAAAAAGGGGCTAAGTCAATCATCAGTACTTAAATTT > 2:436461/1‑124 AAGTTTTTAGCAGCTTAACTTACTGAAATTTAAGTACTGATGATTGACTTAGCCC‑CTTTTCAGACGACATAGCCAATGCCGAAAAAGGGGCTAAGTCAATCATCAGTACTTAAATTTCAGTAAGTTAAGCTGCTAAAAACTTCGACTAC > 2:546223/1‑149 TAGCCC‑CTTTTCAGACGACATAGCCAATGCCGAAAAAGGGGCTAAGTCAATCATCAGTACTTAAATTTCAGTAAGTTAAGCTGCTAAAAACTTCGACTACTGTGATTAATTTCACATCCCTTCGATAAAAAATATGCTTACCGAAAAGA < 1:546223/149‑1 GCCC‑CTTTTCAGACGACATAGTCAATGCCGAAAAAGGGGCTAAGTCAATCATCAGTACTTAAATTTCAGTAAGTTAAGCTGCTAAAAACTTCGACTACTGTGATTAATTTCACATCCCTTCGATAAAAAATATGCTTACCGAAAAGAAG > 1:175838/1‑149 CCC‑CTTTTCAGACGACATAGTCAATGCCGAAAAAGGGGCTAAGTCAATCATCAGTACTTAAATTTCAGTAAGTTAAGCTGCTAAAAACTTCGACTACTGTGATTAATTTCACATCCCTTCGATAAAAAATATGCTTACCGAAAAGAAGA > 1:450398/1‑149 CC‑CTTTTCAGACGACATAGTCAATGCCGAAAAAGGGGCTAAGTCAATCATCAGTACTTAAATTTCAGTAAGTTAAGCTGCTAAAAACTTCGACTACTGTGATTAATTTCACATCCCTTCGATAAAAAATATGCTTACCGAAAAGAAGAA < 2:761919/149‑1 TTCAGACGACATAGTCAATGCCGAAAAAGGGGCTAAGTCAATCATCAGTACTTAAATTTCAGTAAGTTAAGCTGCTAAAAACTTCGACTACTGTGATTAATTTCACATCCCTTCGATAAAAAATATGCTTACCGAAAAGAAGAACAGTA > 1:677400/1‑149 TTCAGACGACATAGTCAATGCCGAAAAAGGGGCTAAGTCAATCAGCAGTACTTAAATTTCAGTAAGTTAAGCTGCTAAAAACTTCGACTACTGTGATTAATTTCACATCCCTTCGATAAAAAATATGCTTACCGAAAAGAAGAACAGTA > 1:677470/1‑149 AAACGCGTGAAAATTCCCCACGCTGAGATGATTTACTGTTCTTCTTTTCGGTAAGCATATTTTTTATCGAAGGGATGTGAAATTAATCACAGTAGTCGAAGTTTTTAGCAGCTTAACTTACTGAAATTTAAGTACTGATGATTGACTTAGCCC‑CTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_hsa_tpiA/1502169‑1502326‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccc‑cttttCAGACGACATAGTCAATGCCGAAAAAGGGGCTAAGTCAATCATCAGTACTTAAATTTCAGTAAGTTAAGCTGCTAAAAACTTCGACTACTGTGATTAATTTCACATCCCTTCGATAAAAAATATGCTTACCGAAAAGAAGAACAGTA < NC_000913_3_hsa_tpiA/1502348‑1502202 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |