| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_tpiA | = 3944991 | NA (NA) | 8 (0.220) | 8/268 | 3.3 | 17.6% | noncoding (1288/2904 nt) | rrlC | 23S ribosomal RNA of rrnC operon |
| ? | NC_000913_3_hsa_tpiA | = 4038798 | 39 (1.010) | noncoding (1280/2905 nt) | rrlA | 23S ribosomal RNA of rrnA operon | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TAAACCATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGcccgct‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_hsa_tpiA/3944844‑3944991‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGAT‑ACCTCCAGCATGCCTCACAGCACACCTTCACAGGCTTACAGAACGCTCCCCTACCCAACAACACATAGTGTCGCTGCCGCAGCTTCGGTGCATGGTTTAGCCCCGTTACATCT < NC_000913_3_hsa_tpiA/4038798‑4038645 TAAACCATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGATGACATAAGTAACGATAAAGCGGGTGAAAAGC > 1:236687/1‑149TAAACCATGCACCGAAGCTGCGGCAGCGACGCTTAGGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCACGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGC < 1:235942/149‑1 AAACCATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCC < 1:210551/149‑1 AAACCATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCC > 1:227916/1‑149 AAACCAGGCAACGAAGTTGCGGCAGCGACGCTTATGCTTTGTTGGGAAGGGGAGCGTTCAGTATGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGCAACGATAAAGCGGGTGAAAAGCa < 2:625861/149‑2 AACCATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCC > 1:342627/1‑149 AACCATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCC > 2:471591/1‑149 ACCAGGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCG < 2:190173/149‑1 CCATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGATGGTGTGCTGTGAGGCATGCTGGAGGTATAAGAAGTGCGAATGCTGACATAAGTAACGATAAAGGGGGTGAAAAGCCCGC > 2:485670/1‑149 CCATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGC < 1:5434/149‑1 CATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGGGCAAAGCCCGCT > 1:545896/1‑149 ATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAGGCCTGCGCAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGACGTGCGAATGCTGACATAAGTAACGATAAACCGAGTGAAAAGCCCGatc > 2:350380/1‑146 TATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGAT‑ACCTCCAGCATACCTCACAGTACACCTTCACAGGCTTACAGAACGCTCCCCTACCCAAC > 2:69858/1‑149 TGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGAT‑ACCTCCAGCATG < 2:236549/84‑1 TGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGAT‑ACCTCCAGCATG > 1:236549/1‑84 GATAAAGCGGGTGAAAAGCCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGAT‑ACCTCCAGCATGCCTCACAGCACACCTTCACAGGCTTACAGAACGCTCCCCTACCCAACAACACATAGTGTCGCTGCCGCAGCTTCCGTG > 1:493669/1‑149 ATAAAGCGGGTGAAAAGCCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGAT‑ACCTCCAGCATGCCTCACAGCACACCTTCACAGGCTTACAGAACGCTCCCCTACCCAACAACACATAGTG < 2:444177/128‑1 ATAAAGCGGGTGAAAAGCCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGAT‑ACCTCCAGCATGCCTCACAGCACACCTTCACAGGCTTACAGAACGCTCCCCTACCCAACAACACATAGTG > 1:444177/1‑128 TAAAGCGGGTGAAAAGCCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGAT‑ACCTCCAGCATGCCTCACAGCACACCTTCACAGGCTTACAGAACGCTACCCTACCCAACAACACATAGTGTCGCTGCCGCGGCGTCGGTGCA > 1:88388/1‑149 AAGCGGGTGAAAAGCCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGAT‑ACCTCCAGCATGCCTCACAGCACACCTTCACAGGCTTACAGAACGCTCCCCTACCCAACAACACATAGTGTCGCTGCCGCAGCTTCGGTGCATG > 2:187309/1‑149 CCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGAT‑ACCTCCAGCATGCCTCACAGCACACCTTCACAAGCTTACAGAACGCTCCCCTACCCCACCCCACACCGTGTCGCTGCGGAAGCTTAGGTGCATGGTTTAGCCCCGctc > 1:313033/1‑146 CCGCTTTATCGTTACTTATGTCAGCATTC‑AAGTTGCGTTGACCTCCAGCATGCCTCACAGCACACCTTCACAGGCTTACAGAACGCTCCCCTACCCAACAACACATAGTGTCGCTGCCGCAGCTTCGGTGCATGGTTTAGCCCCGTTAC > 2:655296/1‑149 GCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGAT‑ACCTCCAGCATGCCTCACAGCACACCTTCACAGGCTTACAGAACGCTCCCCTACCCAACAACACATAGTGTCGCTGCCGCAGCTTCGGTGCATGGTTTAGCCCCGTTACAT < 2:536227/149‑1 TTTATCGTTACTTATGTCAGCATTCGCACTTCTGAT‑ACCTCCAGCATGCCTCACAGCACACCTTCACAGGCTTACAGAACGCTCCCCTACCCAACAACACATAGTGTCGCTGCCGCAGCTTCGGTGCATGGTTTAGCCCCGTTACATCT > 1:186477/1‑149 TAAACCATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGcccgct‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_hsa_tpiA/3944844‑3944991‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGAT‑ACCTCCAGCATGCCTCACAGCACACCTTCACAGGCTTACAGAACGCTCCCCTACCCAACAACACATAGTGTCGCTGCCGCAGCTTCGGTGCATGGTTTAGCCCCGTTACATCT < NC_000913_3_hsa_tpiA/4038798‑4038645 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |