New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA 2798052 =NA (NA)5 (0.140) 5/276 4.0 NA intergenic (+8/+39) ygaP/stpA DUF2892 family inner membrane rhodanese/DNA binding protein, nucleoid‑associated
?NC_000913_3_hsa_tpiA 2798084 = NA (NA)intergenic (+40/+7) ygaP/stpA DUF2892 family inner membrane rhodanese/DNA binding protein, nucleoid‑associated
Rejected: Coverage evenness skew score above cutoff.

TGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCGGTCCAGGTTTTAGTTTCACCGTTAACATCGGTGAATTTATATTTCGCCGGACGCGGCT  >  NC_000913_3_hsa_tpiA/2797960‑2798224
                                                                                                                            |                                                                                                                                            
tGCCGGGTTACTGTTTGCAGGAATCAGCGGTATTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGACTCAGTAATTAGATCAGGAAAtcgtc                                                                                                                      >  1:370374/1‑149 (MQ=255)
tGCCGGGGCACTGTTTTCAGGAATCAGCGGTTTTTGGGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcgtc                                                                                                                      <  1:579452/149‑1 (MQ=255)
 gCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcgtcg                                                                                                                     >  2:340543/1‑149 (MQ=255)
       tgagtGTTTCCAGGCATGAGCGGTTTTTGTGGAACGGCAAGGTTGTTAGAGAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCTCCATTACAGCGATGTTCGGCCTCAGTTATTAGATCAGGAAATCGTCGAGAGAt                                                                                                               <  1:24050/145‑1 (MQ=255)
             tttGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACCTCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCt                                                                                                         >  1:588577/1‑149 (MQ=255)
                          gCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAAAGATTTAACTTCTGCCCGCGCCt                                                                                            >  2:562863/1‑149 (MQ=255)
                           cGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTg                                                                                           <  1:397408/149‑1 (MQ=255)
                             gTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAg                                                                                         <  1:340543/149‑1 (MQ=255)
                             gTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAg                                                                                         <  2:402290/149‑1 (MQ=255)
                                  tgtgGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAGTTTTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAAtt                                                                                    <  2:264237/149‑1 (MQ=255)
                                        aTGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTc                                                                              >  1:27174/1‑149 (MQ=255)
                                         tGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGGTTTACCTTCTGCCAGCGCCTGGGCAATTGGCTTCg                                                                             >  1:22637/1‑149 (MQ=255)
                                                         tAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAACTGGCTTCGGTGTACGGCCCTGAcc                                                             <  2:350418/149‑1 (MQ=255)
                                                          aaGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCg                                                            <  1:314905/149‑1 (MQ=255)
                                                              tGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCGGTcc                                                        >  1:163088/1‑149 (MQ=255)
                                                                     gAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGCCCGGTCCAGGtttt                                                 >  2:263324/1‑149 (MQ=255)
                                                                            cGAGCTTGAGAAGCGACCCCGCACGCGCCTTAGCAGCGACACCCGGCCTCACTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCGGTCCAGGTTTTAGTTTCa                                          <  1:40545/149‑1 (MQ=255)
                                                                                    agaAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCGGTCCAGGTTTTAGTTTCACCGTTAAc                                  <  1:404012/149‑1 (MQ=255)
                                                                                      aaGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCGGTCCAGGTTTTAGTTTCACCGTTAACAt                                >  2:174853/1‑149 (MQ=255)
                                                                                         cGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCGGTCCAGGTTTTAGTTTCACCGTTAACATCgg                             <  2:456796/149‑1 (MQ=255)
                                                                                          gACGCCGGACGCGCCCTAGCAGCGACATCCGGCCCCAGGAATTAGATCAGTAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCGGTCCAGGTTTTAGTTTCACCGTTAACATCGGt                            >  2:614441/1‑149 (MQ=255)
                                                                                               cGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCg                                                            <  2:193430/112‑1 (MQ=255)
                                                                                               cGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCg                                                            >  1:193430/1‑112 (MQ=255)
                                                                                                              agcGTCGTCCTGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCGGTCCAGGTTTTAGTTTCACCGTTAACATCGGTGAATTTATATTTCGCCGGAc        <  2:312846/149‑1 (MQ=255)
                                                                                                                    aTCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCGGTCCAGGTTTTAGTTTCACCGTTAACATCGGTGAATTTATATTTCGCCGGACGCGGCt  <  1:174853/149‑1 (MQ=255)
                                                                                                                            |                                                                                                                                            
TGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCGGTCCAGGTTTTAGTTTCACCGTTAACATCGGTGAATTTATATTTCGCCGGACGCGGCT  >  NC_000913_3_hsa_tpiA/2797960‑2798224

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.