New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	4218462 =	NA (NA)	68 (1.460)	42/260	0.2	NA	noncoding (45/132 nt)	REP311 (repetitive extragenic palindromic) element; contains 3 REP sequences	REP311 (repetitive extragenic palindromic) element; contains 3 REP sequences
	?	NC_000913_3_hsa_tpiA	= 4235439	NA (NA)					noncoding (37/77 nt)	REP313 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP313 (repetitive extragenic palindromic) element; contains 2 REP sequences

AAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_hsa_tpiA/4218627‑4218462 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtcgcatcaggcatcgGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCAGACCATTGGTCGAGCTATCGTGGCTGCTGATTTCTTTATCATCTTTCAGCTCTGGCAGAATACGGTT  <  NC_000913_3_hsa_tpiA/4235439‑4235291                                                                                                                                                                                                                                                                                                                             AAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGC                                                                                                                                                                       >  4:82388/1‑150   GCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGT                                                                                                                                                                     <  1:180524/150‑1    CCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTC                                                                                                                                                                    <  2:384228/150‑1    CCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTC                                                                                                                                                                    >  1:485490/1‑150    CCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTC                                                                                                                                                                    <  3:128555/150‑1    CCTTGCAAAATGGTTCGGACAAGAAATAATTCCAGGCCACGCGGCATTGAGCGTCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTC                                                                                                                                                                    <  2:291000/150‑1     CTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCG                                                                                                                                                                   <  1:354487/150‑1      TTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGC                                                                                                                                                                  <  1:322759/150‑1      TTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGC                                                                                                                                                                  >  3:97926/1‑150      TTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGC                                                                                                                                                                  <  2:416055/150‑1      TTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGC                                                                                                                                                                  >  1:187238/1‑150      TTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGC                                                                                                                                                                  >  4:278212/1‑150      TTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTCCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGC                                                                                                                                                                  >  2:161974/1‑150        GCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCAT                                                                                                                                                                >  1:286216/1‑150         CAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATC                                                                                                                                                               <  4:72066/150‑1           AAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAG                                                                                                                                                             <  1:336341/150‑1           AAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAG                                                                                                                                                             >  3:68279/1‑150            AATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGG                                                                                                                                                            <  4:182757/150‑1            AATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGG                                                                                                                                                            >  2:213350/1‑150               GGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCAT                                                                                                                                                         <  1:177077/150‑1                 TTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCG                                                                                                                                                       <  1:305449/150‑1                 TTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCG                                                                                                                                                       <  4:247414/150‑1                    GAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTT                                                                                                                                                    >  1:82009/1‑150                       cgATCAATAATCCCAGGCCACGCGGCATTTAGCGCCCGCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGTCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCC                                                                                                                                                 <  4:321181/148‑1                       CAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCC                                                                                                                                                 <  2:256395/150‑1                       CAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCC                                                                                                                                                 <  1:505490/150‑1                        AATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCG                                                                                                                                                >  3:43732/1‑150                        AATCAATAATTCCAGGCCACGCGGAATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGCTGCGGCGTAAACGCCTTATCCAGCCTACGTCCGGCAACGGCTGTAGGCATGATAAGACGCGCACGCGTCGCCTCAGGCATCGTTTGCCG                                                                                                                                                >  2:471360/1‑150                          TCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGA                                                                                                                                              >  1:102145/1‑150                          TCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGA                                                                                                                                              <  1:263643/150‑1                             ATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGC                                                                                                                                           >  1:212732/1‑150                              TAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCG                                                                                                                                          >  4:96609/1‑150                               AATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGG                                                                                                                                         <  2:455690/150‑1                               AATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGG                                                                                                                                         <  1:275238/150‑1                                ATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGCTGCGGC                                                                                                                                        >  4:328734/1‑150                                 TTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCG                                                                                                                                       <  3:177105/150‑1                                 TTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCG                                                                                                                                       >  4:20426/1‑150                                 TTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGAAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCAGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCG                                                                                                                                       >  4:337635/1‑150                                 TTCCAGGCCACGCGGCATTTAGCGCCCTCATAAGGAGAAGAGTATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCG                                                                                                                                       >  2:292969/1‑150                                    CAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGA                                                                                                                                    >  3:81589/1‑150                                     AGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAA                                                                                                                                   >  1:113098/1‑150                                     AGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAA                                                                                                                                   <  1:13674/150‑1                                     AGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAA                                                                                                                                   >  2:14763/1‑150                                      GGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAAC                                                                                                                                  <  1:538322/150‑1                                       GCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACG                                                                                                                                 >  4:300451/1‑150                                       GCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCAGATGCGCCGTGAACc                                                                                                                                 >  2:109106/1‑149                                        CCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGC                                                                                                                                <  1:481787/150‑1                                        CCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGC                                                                                                                                <  1:414661/150‑1                                        CCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGC                                                                                                                                <  1:527301/150‑1                                         CACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCC                                                                                                                               >  1:7221/1‑150                                         CACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCC                                                                                                                               <  3:69773/150‑1                                             CGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTAT                                                                                                                           <  1:89006/150‑1                                             CGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTAT                                                                                                                           >  3:140716/1‑150                                                CATTTAGGGCCCTGATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCG                                                                                                                        <  2:118056/150‑1                                                 ATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGG                                                                                                                       <  4:22909/150‑1                                                  TTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGC                                                                                                                      <  1:75877/150‑1                                                  TTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGC                                                                                                                      >  2:187386/1‑150                                                  TTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGC                                                                                                                      <  4:241811/150‑1                                                    TAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCT                                                                                                                    >  4:309983/1‑150                                                     AGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTA                                                                                                                   <  3:94389/150‑1                                                      GCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAC                                                                                                                  <  1:312588/150‑1                                                      GCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAC                                                                                                                  <  3:34041/150‑1                                                       CGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACA                                                                                                                 <  3:201308/150‑1                                                           CTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATC                                                                                                             <  1:319736/150‑1                                                           CTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATC                                                                                                             <  2:444122/150‑1                                                            TCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCG                                                                                                            >  2:370832/1‑150                                                            TCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCG                                                                                                            >  1:232817/1‑150                                                             CATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGA                                                                                                           <  2:313871/150‑1                                                             CATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCGTATCCGGCCTACATATCGA                                                                                                           >  3:133247/1‑150                                                                CAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGA                                                                                                        <  4:313372/150‑1                                                                 AGGAGCAGAGAATTGCCGGATGCGTCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGAT                                                                                                       <  3:341501/150‑1                                                                 AGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGAT                                                                                                       <  1:426012/150‑1                                                                   GAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCTCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGA                                                                                                     <  1:10471/150‑1                                                                   GAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGA                                                                                                     >  2:455845/1‑150                                                                       AGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTT                                                                                                                             <  1:116402/122‑1                                                                       AGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTT                                                                                                                             >  2:116402/1‑122                                                                        GAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAtt                                                                                                <  4:126932/150‑3                                                                        GAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAtt                                                                                                <  2:151050/150‑3                                                                        GAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAtt                                                                                                <  3:25057/150‑3                                                                        GAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTGCGGCGACGGCTGTAGGCATGATAAGACGCGCATGCTTCGCATCAGGCATCGGTTGCCGGATGCGGCGTTAACGGCTTATCCGGCCTACATATCGACGATGATTAtt                                                                                                <  2:29987/150‑3                                                                         AGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAttg                                                                                               <  2:465720/150‑4                                                                         AGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAttg                                                                                               >  2:428997/1‑147                                                                         AGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAttg                                                                                               >  2:341340/1‑147                                                                         AGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAttg                                                                                               <  3:8735/150‑4                                                                         AGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGC                                                                                                                                <  2:382279/117‑1                                                                         AGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGC                                                                                                                                >  1:382279/1‑117                                                                         AGAATTGCCGGATGCGGCGAAAACGCCTTATGCAGCCTACGTCCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGCATGCGGCGTGAACGCCTTATCCGCCCTACATATCGACGAGGCTTAttg                                                                                               >  4:307887/1‑147                                                                          GAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAttgg                                                                                              >  1:434766/1‑146                                                                           AATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAttgga                                                                                             <  3:10691/150‑6                                                                             TTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAttggact                                                                                           >  2:97764/1‑143                                                                                                                                                                 GCATCGGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCAGACCATTGGTCGAGCTATCGTGGCTGCTGATTTCTTTATCATCTTTCAGCTCTGGCAGAATA       <  4:4700/150‑1                                                                                                                                                                      GGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCAGACCATTGGTCGAGCTATCGTGGCTGCTGATTTCTTTATCATCTTTCAGCTCTGGCAGAATACGGTT  <  2:323760/150‑1                                                                                                                                                                                                                                                                                                                             AAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_hsa_tpiA/4218627‑4218462 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtcgcatcaggcatcgGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCAGACCATTGGTCGAGCTATCGTGGCTGCTGATTTCTTTATCATCTTTCAGCTCTGGCAGAATACGGTT  <  NC_000913_3_hsa_tpiA/4235439‑4235291

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.