New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	2349900 =	36 (0.680)	6 (0.110)	6/296	7.1	14.8%	intergenic (+7/+35)	yfaH/glpQ	pseudogene/periplasmic glycerophosphodiester phosphodiesterase
	?	NC_000913_3_hsa_tpiA	2349928 =	33 (0.620)					intergenic (+35/+7)	yfaH/glpQ	pseudogene/periplasmic glycerophosphodiester phosphodiesterase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGTTTACTGATTTCCCTGATAAGGCAGTAAAATTTCTTAATAAAGAGTAATGTTACTGCAGGATGGCGTTCATGCGCCATCCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_hsa_tpiA/2349984‑2349900 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGTAACATTACTCTTTATTAAGAAATTTTACTGCCTTATCAGGGAAATCAGTAAACAGCCCATTTACACCCGCTTTGTTATACAGAGCATCATATAACTGATTCACATCAGGAGTGTATTCAGGCAGTTTATCTGACCGCACG  >  NC_000913_3_hsa_tpiA/2349928‑2350070                                                                                                                                                                                                                                      TGTTTACTGATTTCCCTGATAAGGCAGTAAAATTTCTTAATAAAGAGTAATGTTACTGCAGGATGGCGTTCATGTGCCATCCTGTAGTAACATTACTCTTTATTAAGAAATTGTACTGCCTTATCAAGGAACTCTGTAAACCACTCATTT                                                                                >  4:233113/1‑150            TTCCCTGATAAGGCAGTAAAATTTCTTAATAAAGAGTAATGTTACTGCAGGATGGCGTTCATGCGCCATCCTGCAGTAACATTACTCTTTATTAAGAAATTTTACTGCCTTATCAGGGAAATCAGTAAACAGCCCATTTACACCCGCTTT                                                                     >  3:106944/1‑150                 TGATAAGGCAGTAAAATTTCTTAATAAAGAGTAATGTTACTGCAGGATGGCGTTCATGCGCCATCCTGTAGTAACATTACTCTTTATTAAGAAATTTTACTGCCTTATCAGGGAAATCAGTAAACAGCCCATTTACACCCGCTTTGTTAT                                                                >  1:111457/1‑150                                                         TGCAGGATGGCGTTCATGCGCCATCCTGCAGTAACATTACTCTTTATTAAGAAATTTTACTGCCTTATCAGGGAAATCAGTAAACAGCCCATTTACACCCGCTTTGTTATACAGAGCATCATATAACTGATTCACATCAGGAGTGTATTC                        >  1:6749/1‑150                                                              GATGGCGTTCATGCGCCATCCTGCAGTAACATTACTCTTTATTAAGAAATTTTACTGCCTTATCAGGGAAATCAGTAAACAGCCCATTTACACCCGCTTTGTTATACAGAGCATCATATAACTGATTCACATCAGGAGTGTATTCAGGCA                   >  2:425852/1‑150                                                                               ATCCTGTAGTAACATTACTCTTTATTAAGAAATTTTACTGCCTTATCAGGGAAATCAGTAAACAGCCCATTTACACCCGCTTTGTTATACAGAGCATCATATAACTGATTCACATCAGGAGTGTATTCAGGCAGTTTATCTGACCGCACG  <  2:111457/150‑1                                                                                                                                                                                                                                      TGTTTACTGATTTCCCTGATAAGGCAGTAAAATTTCTTAATAAAGAGTAATGTTACTGCAGGATGGCGTTCATGCGCCATCCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_hsa_tpiA/2349984‑2349900 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGTAACATTACTCTTTATTAAGAAATTTTACTGCCTTATCAGGGAAATCAGTAAACAGCCCATTTACACCCGCTTTGTTATACAGAGCATCATATAACTGATTCACATCAGGAGTGTATTCAGGCAGTTTATCTGACCGCACG  >  NC_000913_3_hsa_tpiA/2349928‑2350070

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.